Pnir052652.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- -
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010021202.1:1-1663[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2 1.5e+04 -1.7 0.5 43 63 156 183 111 202 0.58 2 3 6.3 4.3e+04 -3.2 3.0 24 26 301 303 258 352 0.62 3 3 1.1e-18 7.7e-15 56.9 0.0 3 81 476 553 474 553 0.92
Sequence Information
- Coding Sequence
- TGTCACCTTGGGAATACTCGTTACGCAGTTTCTTCAGATCTTGAACTCACACGATACAGGCTTCAGTCCAGCATGGCCGATAACTACTGGCTGAACGAACAGCTCAAGAATGATGACGCCTTCAACTCAAACCCCAATGGCACTACTTCTGGGGCTAACAGTGAAGACCAGCTCATGTCATCCTTTCTCAACTATCTCGGAGCAGATAACAATGAAACGTCTAATAGTGGGGCGTCTACAATGTCAAACCAGGTCTTTGGAGACAATGCTCAGCAAATGAACAACAACCACGCCGGTATGCTCACACCTCAGGCTATCCTCACCCAGCAGAACCAGAACCAGTACAACCAGAATAACCAAAACATCCAAAACAACCAGAACAGTCAGAACAACCAGAACAACCAAAACACCCAAGTCAATCATAACACTCAGGAGCTCATCCAGTCGATACTGGGTGATAGAAACAGTGGTCAATTccagcaacagcaacaacagcagtcGCCAAACTCAATTGCACAAGGTTTCCCTCCTAACGTGTTTTCACCTAACcttcaacaacaacaacagacGATACCGGCACAACAGCTGAAACAACACCAGCAAGCTCAAAAACCTCCCCAACTGCCGCAACAGAACTCACCACACAATCAAAGCGAGCCTCTGCCTAATCCCCTACTACAATCAAAACCACAGCCTCAGCAAAACCAAAATCAGCGGAATCTGTCTGCTTCAAATGGTGCCCATCCTCCATTTGGTGACAATGCGCCAATGGATAAAGCAGCAATGATCGCTGCTCTACAACAGCGTACCAGTCAGAACCAACAAAGGTttcagcaacagcaacagcaacaacgCCAGCAGTTTATGTCACAACAGATGGGTCAACAGAATCAACAACAACCTAATGTTAATCAAGCACCAAATCTCACTCCccatcaacaacaacaacaacagcaacagctCTTTCAACAACTCCAAAGACAGGAAGCCATGAGACTCCAACttcagcagcagcaacaacagcatcCCCAATCTCAAGCGCAAACAAAAGTTCAAAGCCCTCCAAATAAGGAGCGTCCGAGTCCATCAATTCAAAATCAAAGTCAATTTGAATCTCAATTCATGAATGGTCAGCAAAGTCAGAGTGGTACACCTCAACTAAGTCAAAATCACCTGAGACAACAGTCAGGAACTCCACTGGGCCCGGGAAGTGTTCCACCAACTCCTCAATCACAACAACCCCAACAACTACCACAGCCACAACAATCACAAAACCAAGCTCAAGTGAAACCACATCAACTTCCTCCATCACAGCAGAGACAAAACTCACAGCCGGGTGTATCACAGAGTGCACAACAACAAAATTTGACCCCAGAACAGTTACAACAGAGAAGACTTCAACAACAGATAAGTTCTGCTCAGGTAGAATTGTTCTTGACAACTTTAAAGGACTTCATGAGAAGTAGAGGTACACCTTTAACTGCTATTCCAGTTGTAGGTGATAAAAGAATCCACCCTTTCTTCTTCTATGCTGTTGTTGCAAAATTAGGTGGGTCTGCTAGTGTTGCTAGACAAAACCAATGGGCTTTAGTCGCACAAAAATTGGGTGTTCGTATTGACCAAAATCCACAACTGATTAGAGACTTAGCACAAACATACGT
- Protein Sequence
- CHLGNTRYAVSSDLELTRYRLQSSMADNYWLNEQLKNDDAFNSNPNGTTSGANSEDQLMSSFLNYLGADNNETSNSGASTMSNQVFGDNAQQMNNNHAGMLTPQAILTQQNQNQYNQNNQNIQNNQNSQNNQNNQNTQVNHNTQELIQSILGDRNSGQFQQQQQQQSPNSIAQGFPPNVFSPNLQQQQQTIPAQQLKQHQQAQKPPQLPQQNSPHNQSEPLPNPLLQSKPQPQQNQNQRNLSASNGAHPPFGDNAPMDKAAMIAALQQRTSQNQQRFQQQQQQQRQQFMSQQMGQQNQQQPNVNQAPNLTPHQQQQQQQQLFQQLQRQEAMRLQLQQQQQQHPQSQAQTKVQSPPNKERPSPSIQNQSQFESQFMNGQQSQSGTPQLSQNHLRQQSGTPLGPGSVPPTPQSQQPQQLPQPQQSQNQAQVKPHQLPPSQQRQNSQPGVSQSAQQQNLTPEQLQQRRLQQQISSAQVELFLTTLKDFMRSRGTPLTAIPVVGDKRIHPFFFYAVVAKLGGSASVARQNQWALVAQKLGVRIDQNPQLIRDLAQTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -