Pnir003396.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- JARID2_1
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010004445.1:8557-23955[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8 4.6e+04 -3.3 0.1 48 82 157 188 151 189 0.70 2 2 2.1e-22 1.4e-18 68.9 0.1 6 89 1412 1493 1408 1493 0.94
Sequence Information
- Coding Sequence
- atggttttaagtCGAAATGACaagagaaaaaggaaagaagGAGACCTTGTGGATCTCATGGATCCATTGGCAGAACCACCAAAAAGaacTAAAATACATGCACAAAGAAAGTTTGCTCAAGGAGCAGCTACTCCGATATTCAATCCAACAACTACACCTATCaaggaaaaggaaaaagtaAAGCCTACTGTATTTAGAGAATTAATAACGCACAGAAGACCAAATACGGaggattttttaacatttctgtGCTTTCGAGGTACATCAATACTACCATCGAGTCTCAACTTCTTTAGTACCACGTCTAAAAAAGATAAGCCACAAAATGCTTCAAAGCCATCCTTGACCTCAAATCTCTTTTGCAAGACTAATGGTACATGTGGGAGACCTGTTCCAACGTCAAAAGCCGAAGAGAACACCACTTCGATCAGTCTTCAAAAATCATCTTCCATCAAGGAGAAGCCTTCTAATGTCTCTAAAAAGCAAGCTCCCACAACCATCCCGAAGACAATTAAACTTAAGACCACAAGCTCGGCAATTCAAGCCCTTAAGAAAAAATACCAAGAGCAGAGACTCGCCAAGCAACGCCTCAAGAAGTTCAAGCCCACGTATATGAAAACACGTTCTTGCGTAGACGCGGTTGAACAGACGCCCGACAAATCGCTGTCGACGAAGCTCGTGATGGCGCCCAAGAAAATCCTTTCCCGAATGGAGAACAAGAGGCATGGGCTCAGAAGTACAGGCCCAGCTGACAGTGACACGAAAATTCCATTGCTCCTCAAGTCCCTCAAAAAGCAGGTGCCCGTGaaactgaaaaagaaaagtGCTGTCACGCGAGAAGACGCGTCGAGTGTCGACTCGATGCCGGCGAGGAACGTCCCGAGAAAGGCTGCGACGAAGCTTGTGACGACTAAGCCGCTACAAAAGAAGCTCttcaataaaaacaagaaattcgAGGCGAGACGTGTGACGCGTTCCCGCACCGATACTCCAGTCAGCGTTTCACCGGTACCCATGAACTTGCCTCGACGTCCGACGAGAAAGACGAAAGAGGCCGCGGCCGTGTACATGGAGATATTGGGCAGGAAGCTCGTGAGTCCGGAACTCGAAAACGAAGACAATATGTCTCTGGATAGTTTTCCAGAGCTGCCCAATGCAAGGAAAATTGCTCAGACTGAAAACGAAATCAAGGCTAAGGTTAAGTCGCTAAAAGCTGCTGCCTCTGTTATTAGTACTACCACCAGTGCATCCACTgttaaagagaaagagaagaaagtaGTCACCGGCCCCagCAGCAACGTTAAACCCGTAAAAAGAAAACTTGTAAAACCAATGCTGCCGCTAAAAAACAAGCGGTTGGTAAAGGTGCAGAAGTACCGTGAAATGAACAGCGACGAAGAGTCAGTAAGTTCTAAGGAGACGAGCAAGGGAGCAAAAACATCTATGGTCTCCAGACGATCGGCTCCGTCCGTCCTCGTCAAGGATAAGAAGTTTGAAAATCGCAGTCTGAGATCCACATCGAAAAATACAGAATCTCAAGTCACTGTTAAAAGTAACAAAGAAAGTAGCGGTTCGAAGGACGGACCGAAGGAGAAGATGACAACAGCGGTTAAACGTAAGCGTGATTCTGTTGCTACCgataaagagaaagataaagagaaTCCTTCGAAACAGAAATTCGAAGCTGCAAAGACGAAGAGCAAGACGATCAATGCCGCGGCTGACTCAGAGGAGGAAACCCTGGGTGcgatcttaaataaaataaagagaaagaaggaGATCGAAAAGGTGGAAAGCTTCAGCGAGATACCTGCAAAAAAGTTGGGAGAGTCAAAATTTACAAAGTCAACGACGACGGCGGTAACAGCGAGTACGACGACAATGACGACATCGAGTGCCAAAACTACCACGGTGGAGATGCTAAGGAGTCAAGCCGCATCTGAGGCAACGACGACCAAAATCTCCGACGACGAGGAATCTTTCCGTGGCTTCACGAAGAAGGCCATCTCCAAAGTGGTCAGCACTTGTCACTCCCATGTGAAGGCAAATAAATTGATAGAAGAAATTGACAGTAAGGCGAATGTGTTCAAGACACACGCAGTAGTGACGAGTACGTCACCCGTTCTGAAGGATACGAGGAAGATGGATATTAAGATCTCGTCAACGACGTTTCCGTGCATTAAGCCAATGCAGGATAAGTTGATGTCCATAGGGATGACCAATGCTGTAGTTAATGCTTCTATCAAACAGGAACCTGACTTTGGAGATTTGAAGATTCACCGTACAAGTAAAGAGACAAATATACATTTGAAGGTATCGTGTACTCCGACGGTGCCGCTCAACATCATCGACATGCCAAAGACGTTGGCTCACGGGCGCAAAGAGCGCGTGAACATGTCCACTGAGCAGATCGAGAAGTGGCTGAACGAGAGCTCCCTCGCCAAGGAGGAAAGCAAGGTCGAGATGGAGAGCGTGGCGAATTTTAAGTACGATCCGGGGCTGGATAAACCGAAGAGCGACGTCTCGGTGCCGGCGACGCCGAGTCACGGACACATCTCGATATCGCCGAAGATCCAGCACCTCGTCAGGCCGGTCAACGTCACCCTCTCTAAGCTCTCAGACAGGCTGAAGAAGGCCTCGAGCACGATAAGCGCCAATAGGACCCCCTCGGTCTTTCTCACGAACAGTCAGATATCGCCGGTGAAGCCACAGACGCTCGTCGCGGCGAAGCTCAAGCCCTCGGGGGACAGCGCCATCAACGAAAAGAGGGATCCCCCGAGTACACCGCCCAGCAGGAAGATGAGCAAAGATTCGTCTTACGGGGACGATGCCGCCGACAACGATGCGATATCGAAGTCGGATGGAAATTCCATAGGCGACTCGTCGGAAAAGAAGTCATTGAGCAGTCCCGAGAAGAAGGTTTTTTTTCATCAGCGAAAGCCCTTTCTGCCAAAGGTAAAGGAGCGAAAGGTCGCCAGCAGCGCGTCGGCCTTCTCGCCCGAAAACGAAAGTAGCGTATACGCGTTCGAGAGCGAAGCCGAAGCACCAATCAGTACACCATTTCGTAGGAAGGCAAAAGAAGTTATCGCCAAAGAGAGTAACGGGACTGCCGAAAGAAGCAAGTTAGCAAATAGTGAAGCGAAGGGTAGGAGTGGCGAGGAAATAAAAGTGACCGAGTCTTTAAACTCGCCAGAGGAAGCTCAGAAGGACGAAGAAAGATCGCCTCCGCTGTTAGAAAAAACAACTCCAAAAAACTTCGAGCTTCCGAAAAACTTCGCAGATTTAACGAATATTCAGgTGTTACCACTAGACAAACTAACAACAAGTTGGAGTAGCGTAAATTATAGTGCTTCGATAGCTGTACAAGTAAACCTTGATGATCAGAAGCAACAACGAAAGCAGCAACAAAAAGAACAGTCAGCAACAGCGGAGAGCAACAACGAATCAAATATTGGTCAGAAGAGTACTGAAATCTCGACTCAGACGGATACCAACACGGATAACGACGATGACAATGACAGCGGCCAGCTCTTCTACATACCCCTTCAGGCGGTTACGCGTAATACCTCGGCTCAGGGCGGACAACAGCTCATACAGGGTGTGGCGGTGAAACTGGGCACCGAGGGGCCAACGGGTCCCAATCAGCGAGTCCTATTGAAAGCAAAACTCGTGACGAAGCCCCCGATATCGGTAGCAAGATGCCCACCCATCGGAACCGTGCAGCCGACTGCCAGACTCCCTGTGAGCGTCGAACAATTAGATATGCCTTCAACCTCGACCCACAATTTGCCGGATACGACTTCCAAATTTCAAAACCAAGAGGAAAAAGGAAGCAAAACTATGTCTACCATCGCATCTAAAATTCAAAAATCTCCAAAgaacaaagaaagaaaagtttCAACTGATTTGTCAAAAGGaacgaaaaaaacaaaaacaaaaaatcttaatatttactcGCCAATAAATAAGACAACATTTCCAAAAACAAGGGAAACAAATGAAAAGGCTTTTCTCGTTGAAGCTCCGACTTTTCGCCCTTCGGAGAAGGACTTTCAAGATCCGCTCGAATACATCGAGAAAATACGTCCAGTCGCAGAACAATTCGGTATTTGCAAAGTAATTCCTCCATCAAATTTTAAGccTGAATGTAAAGTTTCGGATGACATGAGATTCACGGCATATAATCATTATGTTCATCGAATGCTTCATCGTTGGGGTCCCAATGTAAAAGAAATGAtggctataaaaaaatatttagctacACAGAGTATAACATTAACTCAACCACCATGGgttgGTGGCATGGAAGTTGATCTTCCACACTTATATCAAACTGTACAAAACTTAGGTGGGTTAAAAGAagttattgaaaagaaaaaatggcaAAAAGTAGCAGATGGCATGAAAATACCAAGATCAGCTCAAGATCGCGTTACTAAATTGGATGACATATACTGCAAATACTTACTTCCTTATGATACCTTGTCACAAGaagaaAGAGATAAACTATTTAAAGATGTAGAAGAGGATTGggttaaaagagaaaaacaagaAAGGCAGGAAACGCTATCTACTGAGAATGAggatgatgatgatgaagatAGTGTAGAAGAAATAGAAGAATgcattgtaaaaGGTCGCAACATGCCGCTGAATGCCTTTTATAGGATCGCCCGTAACACGCAGCGTATGTGGTTCGGCGAATCGCAACGCTCGACCAGCGAGACGGACGGCCCTTCAGCCGAGGAGGTGGAGACTGCGTTTTGGCGGCACGTCGTCGAGAAAAAGCGCCACGTTTGCGTGCATGCCGCAAGCATCGATTCCAGTGGGCGCGGCTTTGGATTTTCAGTGGCCAAGAACAGTCCGTTTGCGCGCCATGCTTGGAATCTCAAAGTTCTTACAAATAATGCTGGCTCGGTACTCAGGGCTCTCGGACCACAAATGGgcgTGACTGTACCAACGCTGCACGTGGGGATGTTGTTCAGCGCGTGCTGTTGGTATCGCGATCCTCACGGTCTTCCATGGATTGAGTATCTGCACACGGGGGCCAAGAAAATTTGGTACGGAATTCCCGACGAGCAAAACAACACGTTCCGCAAAGCCCTGACAACTATGTTCCCACGTTACTGTAAAAACAAAACGATTTGGCTGCCTTCGGACACGGCGATGGTACCGCCCGACATGCTCGTGAGTAACGGCGTGCCGCTTTGCCGAACTGTACAGGAACCCGGCCAGTTCATCGTCGTCTTCCCCAAGGCCTTCACCTCGAGCATCTGCACGGGTTACGTCGTATCCGAGAGCGTCTACTTTGCTCATCAGTCCTGGCTCGAAACCGCTGAACAAGTCTTTCAAGATATTCATGACAGCTGCGAaccttcaatattttcatttgaaagatTGTTATTCAGCATTATTAATGACTCTAGATCTCATATCGAGGTACTTAAGcagATTTTACCAACTGTAATCAAAATTTGCgatttagaaatagaaaatcgacgaaaattaaaagatttgggtcttataaatactgaaaaattacCACTACCAGAAACTGAAAAGAAACGAAAgggtaaaaaagtaaaaaaagaagaaggtGATTACGAATGTGATACTTGTCGAGCAAACTTATTTGTTTCTGTTGTAAGTAATTCCATGGATGAAAGTATTTTCTGCCTGACTCACGCTAtacaatatatagaaaaatag
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMDPLAEPPKRTKIHAQRKFAQGAATPIFNPTTTPIKEKEKVKPTVFRELITHRRPNTEDFLTFLCFRGTSILPSSLNFFSTTSKKDKPQNASKPSLTSNLFCKTNGTCGRPVPTSKAEENTTSISLQKSSSIKEKPSNVSKKQAPTTIPKTIKLKTTSSAIQALKKKYQEQRLAKQRLKKFKPTYMKTRSCVDAVEQTPDKSLSTKLVMAPKKILSRMENKRHGLRSTGPADSDTKIPLLLKSLKKQVPVKLKKKSAVTREDASSVDSMPARNVPRKAATKLVTTKPLQKKLFNKNKKFEARRVTRSRTDTPVSVSPVPMNLPRRPTRKTKEAAAVYMEILGRKLVSPELENEDNMSLDSFPELPNARKIAQTENEIKAKVKSLKAAASVISTTTSASTVKEKEKKVVTGPSSNVKPVKRKLVKPMLPLKNKRLVKVQKYREMNSDEESVSSKETSKGAKTSMVSRRSAPSVLVKDKKFENRSLRSTSKNTESQVTVKSNKESSGSKDGPKEKMTTAVKRKRDSVATDKEKDKENPSKQKFEAAKTKSKTINAAADSEEETLGAILNKIKRKKEIEKVESFSEIPAKKLGESKFTKSTTTAVTASTTTMTTSSAKTTTVEMLRSQAASEATTTKISDDEESFRGFTKKAISKVVSTCHSHVKANKLIEEIDSKANVFKTHAVVTSTSPVLKDTRKMDIKISSTTFPCIKPMQDKLMSIGMTNAVVNASIKQEPDFGDLKIHRTSKETNIHLKVSCTPTVPLNIIDMPKTLAHGRKERVNMSTEQIEKWLNESSLAKEESKVEMESVANFKYDPGLDKPKSDVSVPATPSHGHISISPKIQHLVRPVNVTLSKLSDRLKKASSTISANRTPSVFLTNSQISPVKPQTLVAAKLKPSGDSAINEKRDPPSTPPSRKMSKDSSYGDDAADNDAISKSDGNSIGDSSEKKSLSSPEKKVFFHQRKPFLPKVKERKVASSASAFSPENESSVYAFESEAEAPISTPFRRKAKEVIAKESNGTAERSKLANSEAKGRSGEEIKVTESLNSPEEAQKDEERSPPLLEKTTPKNFELPKNFADLTNIQVLPLDKLTTSWSSVNYSASIAVQVNLDDQKQQRKQQQKEQSATAESNNESNIGQKSTEISTQTDTNTDNDDDNDSGQLFYIPLQAVTRNTSAQGGQQLIQGVAVKLGTEGPTGPNQRVLLKAKLVTKPPISVARCPPIGTVQPTARLPVSVEQLDMPSTSTHNLPDTTSKFQNQEEKGSKTMSTIASKIQKSPKNKERKVSTDLSKGTKKTKTKNLNIYSPINKTTFPKTRETNEKAFLVEAPTFRPSEKDFQDPLEYIEKIRPVAEQFGICKVIPPSNFKPECKVSDDMRFTAYNHYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWVGGMEVDLPHLYQTVQNLGGLKEVIEKKKWQKVADGMKIPRSAQDRVTKLDDIYCKYLLPYDTLSQEERDKLFKDVEEDWVKREKQERQETLSTENEDDDDEDSVEEIEECIVKGRNMPLNAFYRIARNTQRMWFGESQRSTSETDGPSAEEVETAFWRHVVEKKRHVCVHAASIDSSGRGFGFSVAKNSPFARHAWNLKVLTNNAGSVLRALGPQMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEQNNTFRKALTTMFPRYCKNKTIWLPSDTAMVPPDMLVSNGVPLCRTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAHQSWLETAEQVFQDIHDSCEPSIFSFERLLFSIINDSRSHIEVLKQILPTVIKICDLEIENRRKLKDLGLINTEKLPLPETEKKRKGKKVKKEEGDYECDTCRANLFVSVVSNSMDESIFCLTHAIQYIEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -