Pcon019835.1
Basic Information
- Insect
- Plectrocnemia conspersa
- Gene Symbol
- nfxl1
- Assembly
- GCA_009617715.1
- Location
- VTFK01000448.1:178856-192576[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2 2.4e+04 -7.9 5.6 15 19 207 211 206 211 0.81 2 15 0.42 5e+03 -1.9 0.6 4 10 242 248 242 248 0.93 3 15 6.2e-08 0.00075 19.9 14.4 1 19 256 273 256 273 0.99 4 15 2.9e-05 0.35 11.4 14.6 1 18 309 326 309 327 0.93 5 15 2.3e-08 0.00028 21.2 12.2 1 19 362 380 362 380 0.99 6 15 7.1e-05 0.85 10.1 14.3 3 18 417 432 415 433 0.91 7 15 0.72 8.7e+03 -2.7 0.6 1 5 442 446 442 451 0.71 8 15 3.8e-07 0.0045 17.4 14.0 1 18 467 484 467 485 0.98 9 15 0.00092 11 6.6 13.3 3 19 496 512 488 512 0.86 10 15 0.00046 5.5 7.5 8.9 9 19 560 570 559 570 0.92 11 15 0.00076 9.1 6.8 6.0 1 11 579 588 579 589 0.96 12 15 0.9 1.1e+04 -3.0 5.8 14 18 617 621 617 622 0.89 13 15 0.0012 15 6.2 6.4 1 12 658 669 651 669 0.91 14 15 1.4 1.6e+04 -3.6 16.8 3 19 696 712 695 712 0.92 15 15 2.7e-05 0.33 11.4 11.5 3 18 756 772 755 773 0.88
Sequence Information
- Coding Sequence
- ATGGGGGATAGAAATAATAAACCTCCCGATAATCCATGGTTTAAAAACCTGAGTCAGTTGGCTGGGCCATCGACAAGATCTAATGCGGCCGGGTCGTCAAGATCTAATGCGGCCGGGCCGTCAAGATCTTACGTGGCTGGGTCATCGAGACCTGTTGCAGCCGGGTCGTCGAGACTTATTCCGGCCGGGTCATCGAAACCTAATGCAGGTGAACTTCCAGAAAAGTTCCTAAAAGCTAGCGCCCAGATGATGAAATCGGCGTCGAAATATGCTCATTCATTTGAGTCATCATCCGACGAAGAAGATCTGCAAGAGGACTCTATACTTTcttCCATAATGAAGGAATATTCAAGCGAAGGGAAAGATAAGTCTTACGATAGAACAAGAGAGTTTCTAGAACAATCGTTCCAATCTGGAGCTACTGTTTGTCTTATTTGTATTGCATCTGTGAAGAGAATCCAGCCTATATGGAGCTGCGAAGTATGTTATACGGCATTGCATTTGCCGTGTCTACAAAGATGGGCTAATGGAACGGTGCAGCATCAGACTGAACCGATAGATCCTTTGTTATCGGATACGATCATTCGTATGAGACCTACGAGGAACATCGAATGGTGCTGCCCCAAGTGTCGCACTTCATATTCGAAAGAACAAATCCCGAATTTCTATATGTGCTTTTGTAAGCAAAAGCGCAATCCTGAATATCAGCCATGGCTTATACCGCATTCATGTGGCGCAACATGTGATAAGCCACTAATTCCGGACTGCGGTCATAATTGCTTGCTGTTGTGCCATCCAGGAGCCTGTCCGCCGTGTCCTAAGATGATTATAATTGAGTGCTACTGTGAGAAAAACCCTGCTAAGCCAATCCGTTGTAATATGAAAGGATGGTCttgcgataaaatttgcaataaattactaTCGTGCTGCACTCACAAGTGCGAGTTGCAATGTCACTCCGGTCCTTGCTATGCATGCGTAAAGACGACGCTTCAATTCTGTAGATGCCAAAAGTCCGAGAGTGCACGACCTTGCGAGAGTCTCGAGTGGATATGTGGCATgccgTGTGATAAAAAATTCTCATGCGGTTTTCATCTCTGCGAGAAGATCTGCCATGAGGGCCCATGCGGCAACTGTCCGTATACTGGTATTCAGAAATGCCCTTGCGGTTGCTTTCAAATGGAAGTATCCTGTCCTGACGTAGTAGTCCCGTGTGGAAGTACTTGCAATAAAGTTTTGCCGTGCTTTGAACATCATTGTCCTAACAAATGCCATCGAGGACCTTGCGACCAGTGTCTCAAGCTAGTGGACAAAACTTGCTTTTGCGGTTTGCACGAGAAGCAGCTGCCTTGCTACAAGCAATTCTATTGCGATACTAAATGCAAGAAAGTGAAGAACTGTGGTCGTCACGCTTGCAGCAAGAAGTGCTGCAGTGGCAATTGTCTGCCGTGTGATAAGATATGTGGCAAGACGCTCGAGTGCAAAAAACACAAATGTCCAAATGTATGCCATCAGGATTTTTGTTACCCGTGTCCTTTGACGTCGAGGATCGCTTGCAGATGTGGAGAAACTGGATATTCGGTGCCATGCGGCCACGAGAAGAAAAACAAACCACCCAAATGCAGCAAAAACTGCAAgaTTCTTCCTTCGTGCAATCACATCAAGGAAAACTACCACAAATGCCACTTCGGACCGTGCCCGCCTTGTAAGCAGCAATGCGGAAAAGAGCTGCCCTGTGGCCACAAGTGTACAGCCATGTGTCATAACGCTGTGCCTATTTTGCTGCATGCTCCGAAACCAGCTGGCCCTTGGGACGTTCAAGCGcccaaaGTCGAGATCAGAACTCTGCCATGCCCACCGTGCAACGAGAAAGTCATCAGACCTTGTTTGGGCGGTCACGAGGAATGCGAGATGCCTTGTGTCGAAGCTCGTGTGTCGTCGTGCGGAAGAAAATGTGGAAAACCGCTATCGTGCACCAATCATACGTGCTCTCGAGACTGCCATCCGTTTGAACCGGAAGACGATGatAATTCGAAATGCGAGTTATGCACGAGATCTTGCGAATTTGCATTGCCTGAGAACTGTAAGCACCCTTGCAAAAAAGGATGTCATCCACCGCCCTGTGATTTGTGCCAGCAATATGTTAAAAAGCAGTGCCATTGTGGTATAACTGAGTTATATGTTAGGTGTTACATGCTGACATTGGCTGAAGACTTGGAAAGCACACTTTCGTGCAAACAACAATGCAGCCGCAtgGTGGAGTGCAATCATAGATGTTCAATAACATGTCATTCCGGACAATGTCCGAACGATTGCTCAAAAAAAACTAAAGTCCGTTGTCCTTGTGGCCGAATCAAAAAAGACATTCCTTGTAATTTGGTCAAAAGTGAAGAAAGTGCCGTCCTGTGCGATAAAGTGTGCgaagagaaaaaaatcattcaaaacaCAATTTTGGCCGAAGTCGAGATGAAGAGGATGCAAGAAGAAATGGCGAAGAATGAACGCGAGTTGCTCGAGTATGAAAACAAATTTGGTAAGAGAAGACACCGAGAACCGAGGACTAAAAACAACTCCAACGACAAGAAACAACCTGGAATTAtcagcaaatataaatatgccatTATAACTTCGGTCATTGTCGTTTTGTCGATAGGAATATCTCTTGTCACTATAAACATCTAA
- Protein Sequence
- MGDRNNKPPDNPWFKNLSQLAGPSTRSNAAGSSRSNAAGPSRSYVAGSSRPVAAGSSRLIPAGSSKPNAGELPEKFLKASAQMMKSASKYAHSFESSSDEEDLQEDSILSSIMKEYSSEGKDKSYDRTREFLEQSFQSGATVCLICIASVKRIQPIWSCEVCYTALHLPCLQRWANGTVQHQTEPIDPLLSDTIIRMRPTRNIEWCCPKCRTSYSKEQIPNFYMCFCKQKRNPEYQPWLIPHSCGATCDKPLIPDCGHNCLLLCHPGACPPCPKMIIIECYCEKNPAKPIRCNMKGWSCDKICNKLLSCCTHKCELQCHSGPCYACVKTTLQFCRCQKSESARPCESLEWICGMPCDKKFSCGFHLCEKICHEGPCGNCPYTGIQKCPCGCFQMEVSCPDVVVPCGSTCNKVLPCFEHHCPNKCHRGPCDQCLKLVDKTCFCGLHEKQLPCYKQFYCDTKCKKVKNCGRHACSKKCCSGNCLPCDKICGKTLECKKHKCPNVCHQDFCYPCPLTSRIACRCGETGYSVPCGHEKKNKPPKCSKNCKILPSCNHIKENYHKCHFGPCPPCKQQCGKELPCGHKCTAMCHNAVPILLHAPKPAGPWDVQAPKVEIRTLPCPPCNEKVIRPCLGGHEECEMPCVEARVSSCGRKCGKPLSCTNHTCSRDCHPFEPEDDDNSKCELCTRSCEFALPENCKHPCKKGCHPPPCDLCQQYVKKQCHCGITELYVRCYMLTLAEDLESTLSCKQQCSRMVECNHRCSITCHSGQCPNDCSKKTKVRCPCGRIKKDIPCNLVKSEESAVLCDKVCEEKKIIQNTILAEVEMKRMQEEMAKNERELLEYENKFGKRRHREPRTKNNSNDKKQPGIISKYKYAIITSVIVVLSIGISLVTINI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -