Pcon020826.1
Basic Information
- Insect
- Plectrocnemia conspersa
- Gene Symbol
- stc
- Assembly
- GCA_009617715.1
- Location
- VTFK01000349.1:231862-241630[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 2 2.4e+04 -4.2 1.6 15 19 446 450 445 450 0.81 2 10 0.31 3.8e+03 -1.5 1.1 1 5 464 468 464 468 0.96 3 10 0.055 6.6e+02 0.9 0.3 4 10 480 486 478 488 0.92 4 10 4.3e-06 0.051 14.0 11.7 3 18 495 510 493 511 0.92 5 10 7.6e-07 0.0092 16.4 13.5 3 18 549 564 547 565 0.92 6 10 2.6e-08 0.00032 21.1 12.3 1 19 606 624 606 624 0.97 7 10 2.6e-05 0.31 11.5 10.0 1 18 666 687 666 688 0.88 8 10 2 2.4e+04 -5.0 7.3 9 18 800 811 799 812 0.68 9 10 8.2e-09 9.9e-05 22.7 13.7 1 18 848 866 848 867 0.92 10 10 0.0089 1.1e+02 3.4 14.1 1 19 877 898 877 898 0.93
Sequence Information
- Coding Sequence
- ATGGGAGAGTGGAATTATAACAACAGATACCCCGGTTATGGGTACGACGGGAATAGGAGTTATTCTAACAGACAACAACAACCGCCCGAATCGAATTATTACAACAATCAGCAATACGCGAACAACGGCAGTAATAATTCGAGGCAATACGTCGGATTCCAAGAATTTTTGAATCAGTATCAACAAACATCCTTTCAAGGATTCGCCAACGGATATCCGAATCAGGGCGGTTATAACCGATTTCCTTTCGCCGCGAATAACGATATGGCTTATAATTTTGCCAATCAACAGCAACAGAATTACACCAATCAGCCTCAAGAGTCAAATTTGGCTCAAAATAAACCGCATTATCAAAACTCACGAGTGCCTTCCGAAGCTCAAAGGCGTAACACTGCAGAACCGGCTAACGCTTCAAATCCGATCGAAAGTAGTTCGTCCGATAAGCAAATCAGTTCTAAATCTAAATTGACGGCAACCGCCGAAGAATTTGTACCTTCAAAGTCAAGATGGGATAATTCCCAAGAATCAAATCATACTAAACAGACTCAACATGTTAAGAAAGAGGAACATAAAGAAACACCGATTGAATCTAGAGACGAAAGCACTACATCTGTAAAATCGGCACCGAAAAACAATTCGTCGAAGGGTAATAACAAGAACGCTCACTGGCGACAGAAAGAAGAATATTCAGAACCACGCAATGCTCCAATAACGTCAGTCGTTTTCGAAAATAACCGAAACGAATCTAGTTCTTCGGCAAACTGGCGCGATTCGGGCGCATTCAAGCCTAAAAAGGAACCGTATCAGAGCTCTAAACCCGTCGGCAGGAATGGAAATGGAAATTCCAATGATCGCGGCCGATCTTACAATAATTACAGATCGCAGAACGCCGATTACGAACAGAGCGCGGAGCCCGAAAGTGCCAAATATGGAAACCGTCAAAAATCGTACATGTCGAACGAGACGTTTAGACAGAGAAACAATCGTTCGGATAGAAGAACCGATAGAAACGATGAATATGCCAGTAAGGAGAATGATTACGATTACGGCAATGGGGGTCGGGGAGCTGTGAGAAAATCGTCAAGAAATCAGCCGTTCGGTCAAACTAAAAAAAGAGGCTCGCCTGTGTTGAAAAAAGATATCGACATGCCCGAGGTATCGCAAAAAGAGAGGCTCACGGAGCAGTTGAATAAGGGAGTGCTCGAATGCCTGGTTTGTTGCGAATGCATCAAGCAACCGGATAGTATCTGGTCTTGCAGCAATTGCTTCCACGTGCTACATCTCTCGTGCATCATCAAATGGGCGAACAGCAGTATCGCCGATGGCGGATGGCGTTGCCCAGCGTGCCAAAACAACAACACCATCATACCGAACAAGTATAAATGCTTCTGCGGAAAACACACGAATCCTGAGTGGGCGAGAGGAGGTGACAGCGCCCACACGTGTGGAAACATTTGCGGAAAACTGCCGGCCAGTTGCTTGAGACATCCTTGCACCTTGTTGTGTCACGCGGGTCCGTGTCCTCAATGCGATGCTGTCGTCTTGAAAAAATGCGAATGCGGAGCCACTGAACAGTCGATGCGATGTTCACACAGTCAACCTTTATTGTGTGGACAAGTGTGCAACAAACAACTCAACTGTCGTGAGCATAGATGTCAAGAAAAGTGTCATGCAGGTGCATGTGAGCCGTGCGGTGAAGCTGTAGAGCAAGAGTGCTATTGTTCAAGAACCGAAAAACGTACATTACCTTGCGACACAAGCACCATCGGCATATTCAACTACAGCTGTGGAGAAATCTGTCTGAAGAAACTAATGTGTGGTGCGCACAACTGCACAAAGATATGTCACAAAGGCGATTGCGAAGAGTGTCAACTGCTGCCAAAGAACGTTAAGAAGTGTCCATGTGGCCAAACAttgtTGACGTTGGAACAAGTGAGGAATTCGTGCGAAGATCCTATTCCGGTCTGTGATAAAATTTGCTCGAAACAATTCGATTGCGGCCCTTCTGAAAACAAACACAAATGTGTTACTTCTTGTCACGCCGgcGATTGTCCTCTGTGCGTTGACAAAACTGAAGTGCCCTGTCGATGCAGCAACATCACCGTCCAAGTACCATGCGTCAACTTGGAGAAAGAACGACACAATATCAGATGCAAGCGAAAACGTAGATCATCGGTGTCCTTTGCCCTGCAACCGATCTTTGACTTGTGGCCTGCATCGCTGCGAAGACACCTGCCACAGCGGCCGCTGCGATTTGTGCTGGAGGACCAGCTTCGACGAACTGAGGTGCCGGTGCGGAGAAGCAGTGCGATATCCGCCTATCCCGTGCGGCACTCGTCCGCCGAGCTGCACCAAGCCGTGCTCTTTGACCAGGCCATGCGGGCATCCCCGTTGCATCTCTGTCATCCTGAACCGTCCACGTGTCCGCCTTGCGCCGTGTTGACGCAGCGCTACTGTTACGGTCGACACAGAatgAGGAAGACTATTCCGTGTCATCAGGAAGAGTTCTCCTGTGGACTACCTTGCGGGAAGGATTTACCATGCGGCAAACATAAGTGTATCGAAACATGCCACAAAGGCCCGTGTCCAACAGCATGTACCCAACAATGTGAAACGGAAAGATTGAATTGCTCGCATCCTTGCAACGCTCCATGTGGACATCCAGGCCCTTGCCCTATTTTAGCTCCATGCAAACGACCCGTAAACGTAACCTGCATGTGCAAGAGACGTACTTCTGTAAAAGCGTGCGCCGAACATATGCGCGATCTTCAACGTTTGCAAGCAAACACCGGCATGCTGGAAGGATCAATGGGAAAACCGATCGATATCAAGGAGTTGATTGAAAAAGGAAATACAACTGTAGTattggATTGTGATGATGAATGTTACGTGGAAGAGCGCAATCGCCGTATGGCCATCGGACTGCAGATACGCAATCCCGACATATCGTCTAAGCTGATGCCTAGATATTCCGAGTTCATGAAGCAGTTTATCACTAGAGACGAGAGCTTTTGCGTTAAGGTTCACGAAAAATTGACCGAGCTCGTGCAGTTGGcacaaaaaTCTAAGCAGAAGACTAGGAGTCACTCGTTTCAACCGATGAACCATTTAAAGAGACAGTTTGTGCATGAATACTGCGAGCAGTTTGGATGCGAGAGCAAGGCTTACGACACAGAGCCTTATAGGAATATTGTGGCAACTGCTTATAGAGAAaagTCATGGTTACCAGCTTTGAGCTTGATAGAAGTCGTTAGACGCGATAAAGGACAACGTCGCGTACCTGGACCCATTATTAGCGGATCTGTAAACAATTTTGCAGGATCACAACCTAAATCATCTACGAGttctgGCAGTGCTTGGTCGACATTGTCCAATAATTATGCAGCTGCTATATCTGATTCGACACGTTTAACCTCGAGTGCGTCACTCGGAGCCGATCCAAATGCTCTTCCGGAACCAGCACGCAAACCGAAAATCGATTACTTTGACGCCCCGCCTGAAGATTGA
- Protein Sequence
- MGEWNYNNRYPGYGYDGNRSYSNRQQQPPESNYYNNQQYANNGSNNSRQYVGFQEFLNQYQQTSFQGFANGYPNQGGYNRFPFAANNDMAYNFANQQQQNYTNQPQESNLAQNKPHYQNSRVPSEAQRRNTAEPANASNPIESSSSDKQISSKSKLTATAEEFVPSKSRWDNSQESNHTKQTQHVKKEEHKETPIESRDESTTSVKSAPKNNSSKGNNKNAHWRQKEEYSEPRNAPITSVVFENNRNESSSSANWRDSGAFKPKKEPYQSSKPVGRNGNGNSNDRGRSYNNYRSQNADYEQSAEPESAKYGNRQKSYMSNETFRQRNNRSDRRTDRNDEYASKENDYDYGNGGRGAVRKSSRNQPFGQTKKRGSPVLKKDIDMPEVSQKERLTEQLNKGVLECLVCCECIKQPDSIWSCSNCFHVLHLSCIIKWANSSIADGGWRCPACQNNNTIIPNKYKCFCGKHTNPEWARGGDSAHTCGNICGKLPASCLRHPCTLLCHAGPCPQCDAVVLKKCECGATEQSMRCSHSQPLLCGQVCNKQLNCREHRCQEKCHAGACEPCGEAVEQECYCSRTEKRTLPCDTSTIGIFNYSCGEICLKKLMCGAHNCTKICHKGDCEECQLLPKNVKKCPCGQTLLTLEQVRNSCEDPIPVCDKICSKQFDCGPSENKHKCVTSCHAGDCPLCVDKTEVPCRCSNITVQVPCVNLEKERHNIRCKRKRRSSVSFALQPIFDLWPASLRRHLPQRPLRFVLEDQLRRTEVPVRRSSAISAYPVRHSSAELHQAVLFDQAMRASPLHLCHPEPSTCPPCAVLTQRYCYGRHRMRKTIPCHQEEFSCGLPCGKDLPCGKHKCIETCHKGPCPTACTQQCETERLNCSHPCNAPCGHPGPCPILAPCKRPVNVTCMCKRRTSVKACAEHMRDLQRLQANTGMLEGSMGKPIDIKELIEKGNTTVVLDCDDECYVEERNRRMAIGLQIRNPDISSKLMPRYSEFMKQFITRDESFCVKVHEKLTELVQLAQKSKQKTRSHSFQPMNHLKRQFVHEYCEQFGCESKAYDTEPYRNIVATAYREKSWLPALSLIEVVRRDKGQRRVPGPIISGSVNNFAGSQPKSSTSSGSAWSTLSNNYAAAISDSTRLTSSASLGADPNALPEPARKPKIDYFDAPPED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -