Basic Information

Insect: Plectrocnemia conspersa
Gene Symbol: -
Assembly: GCA_009617715.1
Location: VTFK01000184.1:1274843-1284278[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.051 4.4 8.4 1.0 1 23 62 85 62 85 0.95

2 21 0.017 1.5 9.8 3.7 1 23 92 115 92 115 0.97

3 21 0.024 2.1 9.4 1.2 2 23 167 189 166 189 0.96

4 21 2 1.8e+02 3.3 3.6 1 23 195 217 195 217 0.97

5 21 0.0011 0.093 13.6 0.5 2 23 223 244 222 244 0.97

6 21 0.86 75 4.5 4.2 2 22 464 484 463 484 0.95

7 21 6.8 5.9e+02 1.7 1.4 1 23 563 585 563 585 0.79

8 21 0.033 2.9 9.0 0.7 2 23 721 742 720 742 0.97

9 21 0.0076 0.66 11.0 2.2 2 23 828 849 827 849 0.97

10 21 0.12 11 7.2 0.3 1 20 857 876 857 879 0.95

11 21 0.014 1.2 10.1 2.1 1 23 907 929 907 929 0.96

12 21 0.0031 0.27 12.2 5.1 1 23 936 958 936 958 0.99

13 21 0.13 11 7.1 2.4 1 23 1027 1049 1027 1049 0.98

14 21 0.35 30 5.7 1.0 1 23 1097 1119 1097 1119 0.96

15 21 0.074 6.5 7.8 2.1 1 23 1125 1147 1125 1147 0.97

16 21 0.02 1.7 9.6 1.0 1 23 1216 1238 1216 1238 0.95

17 21 0.0054 0.47 11.4 0.1 1 23 1244 1266 1244 1266 0.95

18 21 0.0045 0.39 11.7 2.6 1 23 1352 1374 1352 1374 0.97

19 21 3.9e-05 0.0034 18.2 1.2 1 23 1380 1402 1380 1402 0.99

20 21 0.091 8 7.6 3.2 1 23 1479 1501 1479 1501 0.99

21 21 0.0011 0.098 13.6 1.2 1 23 1511 1533 1511 1533 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.051	4.4	8.4	1.0	1	23	62	85	62	85	0.95
2	21	0.017	1.5	9.8	3.7	1	23	92	115	92	115	0.97
3	21	0.024	2.1	9.4	1.2	2	23	167	189	166	189	0.96
4	21	2	1.8e+02	3.3	3.6	1	23	195	217	195	217	0.97
5	21	0.0011	0.093	13.6	0.5	2	23	223	244	222	244	0.97
6	21	0.86	75	4.5	4.2	2	22	464	484	463	484	0.95
7	21	6.8	5.9e+02	1.7	1.4	1	23	563	585	563	585	0.79
8	21	0.033	2.9	9.0	0.7	2	23	721	742	720	742	0.97
9	21	0.0076	0.66	11.0	2.2	2	23	828	849	827	849	0.97
10	21	0.12	11	7.2	0.3	1	20	857	876	857	879	0.95
11	21	0.014	1.2	10.1	2.1	1	23	907	929	907	929	0.96
12	21	0.0031	0.27	12.2	5.1	1	23	936	958	936	958	0.99
13	21	0.13	11	7.1	2.4	1	23	1027	1049	1027	1049	0.98
14	21	0.35	30	5.7	1.0	1	23	1097	1119	1097	1119	0.96
15	21	0.074	6.5	7.8	2.1	1	23	1125	1147	1125	1147	0.97
16	21	0.02	1.7	9.6	1.0	1	23	1216	1238	1216	1238	0.95
17	21	0.0054	0.47	11.4	0.1	1	23	1244	1266	1244	1266	0.95
18	21	0.0045	0.39	11.7	2.6	1	23	1352	1374	1352	1374	0.97
19	21	3.9e-05	0.0034	18.2	1.2	1	23	1380	1402	1380	1402	0.99
20	21	0.091	8	7.6	3.2	1	23	1479	1501	1479	1501	0.99
21	21	0.0011	0.098	13.6	1.2	1	23	1511	1533	1511	1533	0.98

Sequence Information

Coding Sequence: ATGGCGTCGCCCTCTATGGTGCAGAGGTCCGGCGACACTCTCATCGTCAGGAGCGTCGTCAGCGGCGATAGGTTGTATCTAGAGTCGGGAGCCCCCGTCGCCGAACCTTCGCCCCCAGCTTCGCCTCCGATCCAAGACGAAGTCGACGAGACGGAGCTGCCTCAATGCAAGATCAAACGAAACTATGACTGCGCCGACTGCGATTACTTCACCCAAAACCCTCGACATTATCTGTCGCATCTGCGCGACGTCCACGGTGAAAAAGTAAAGATATATGACTGCCCCCATTGTCTGTACGCATCCAAGCATTACCAGAAGCTCCTCAGACACATGAAGATGGTTCACGGCGTCGGTAAGGGTGCCGAAGAAGCGACGGCGGAAGTCGAGCGCAAGCGCCGCGCTCCTAAAGCCGAACCGGAACCTGAAGAAGAATGCGATCTCGAAGATCCCGAGTCTGGCGGTGAACCCGGTCCCGCTAAGAAGGCCAAGACGGAACTGGAATGCTCGATGTGCGACTTCGCCGCTAACAGCCACAACCAGTTGACGAGGCACGAGCGCAAAGAGCACCTCAAGACCAAATTCTTTCCCTGCTCCAAGTGCAACTACGTGACGCACATCAAAGCGCGCTTCACCAAACACGTCAAGTACCACTCCATGCCGATGATCAAATGCGAAGTTTGCGACTTTCGAACGCCCTACAAGTGGAACTTGGATAGGCACATGAAGAACCACGGTGGAACCGGCGCGTTTTGCTGCTCGGCGTGCAATTTCACGGCAGATATTAAGCAGAGTCTGACCGTGCACGAGATGAATCATCACGTTCCGGCAGTTGGAGGTGGCGCCGCGGGAGGCGGAGGCTCGAACGGCACGCCGCCGCCGCCTCGACGCAGGAACAGAGTCGGGGGTAGCGATTCCCTTCCGGCGGTCGGGCCTTCTTCTCCACGCGCTCCCAGAGCGAGGCGCTCTCGTCCGCGCTCCAAGCCCGCGGAGCTGGAGAGAATCAGTCCCGAGCCGGAGAGCTTCTCCGATCTGGCCGAGATAACACTGGCGGAGCGCGTCGAGCCAGAAGAAGAACCCAAAGCGCCAAAGAAGACTCCTCGGCCGATTCCGAATCTGATTCCGCTCCAAGTCAACGGAGTTCCGCCTCCGCTGAAGAGCGCTACTCCCCTCGATCTGTGCACCTCTTTCAAGAACGAAGACAACGATGAAGAGCAGCAGTCGAGGCCGACGCTCAAGAAGAAGAGCACCTCCATCTTCGAAAAGCTGTACAAAGAGAAGCTGATGACCGTTGGCGACGATCGAATCTCTCCAAAGCCTCCGTCCGTCGAAGGGAAGAGGATCAACGGACTTTCGACCGAGACGTCGAGGATCTCTGGTTCGGGTTCGACGAGATGCCAGCGCTGCAGGCACAGATGCAAGTCCAGCAACGATCTAGTGCTGCACATGCAGACCTGCGTTGCCAAAAGAGACGAAGCGGAAGCGCCGGCGATCCCGGCGTCCGAAGAAGAGGGATCCGCGGACGACCCTCAAGCGCCACACCCCATGGAGAACGTCGTCTTCGTGTGGAACTCGATGCTGAAGAAGACCGACTCTTTCGACGACTCCGAGCAGCACTTCGACGGCGCGGCTGTCGCGTCCTCGTCGACGCCGAAACGCGAGAAAGAAGCCGCCGGCGGAAAGAGGGTGTTCAAATGTCCGCATTGCTCGTTCTGGGCGTCTACCGCGTCTCGCTTCCACGTGCACATCGTCGGCCATCTCAACAGAAAGCCGTTCGAATGCTCCCTGTGCTCGTACAAATCCAACTGGCGTTGGGACATAACGAAACATATCAGACTGAAGTCGGTCCGCGATCCCGATCATGCCAAAGCCAGAGTGTTGATGACGGACGAGACGGGAAGACGGAActacagtaaatataataaatatttaacattaacgtGCAATATGCGAGTATCCGATACGTCCGCTGACGCAGTGGGCGCTACCGGTAGTAGGAAAAGTAGAGAAATGATTCGGGTTGTTCCAGATGCATTCGAAACCGACATGCAACCGGCGACCTCCGGCGATAACGTTAAACCTTTCGTAGATATAAAGTTAGACGAGCGAAAGAACACTAACGAAGTCTGCGTCGAAGCCAAGAAGACCAAAAAGACCATGTGGAAGTGTAAAAAGTGCGATTATAGGAATGCAAGCAAAGACGCCTTACTCATGCATGTCAGAAAACATTCAAAGTCGAGCGCGGCGCAGCCTCGGCAGGAAAAACAAGCGGACGCATCCGACATGTCGGAGGTATCGGGCGCTTCCGACGTGTCGAGTATATCGTATAGATGTGGTCATTGCAACCAGGTATCCAATTGGAAGCATGTTATTCAGagaCACTGTCGGTTAAAACACAACGGAGATGTCAAAGTGGTAGTTGGGATGAAAAACTCATGCGACAAGCAGTCAAACTCGCCTAACGGCGCTTCCAGCTACGACATGAAATGCTCCAAGTGTCCTTTCACCACGACTACGAAATACCTCTACGAGAGTCATCTCAAACAGCACACCATTAACTCTGACTCGAACTTCAAATGTTTCATCTGTCCGTATTACGTCAAATCGGAGACGGATTTGATACAGCACCTTCCGTTGCACGGAATATCTGAACCCGAGAAATACGGCGCTCAAATAGTCAACTGTAAGCCACCCGTCGGCGAAACCGTTCAGATGAAACGGTACAGATGTTCGGACTGTCCGTACGAGAGTAACAGCAAGTCTCAGTTTACGTATCACGAGCAGTTCCACAAGGCACACAACGCTCCGTTCAAATGCGAGATTTGCAACTATCAGGTCACGAAGAGACACTTGCTGCATCAGCATATGAAAGTGCATGGATTTACGCTCTCTAATATCATATCCATAGAGCCAAACGCTCAATCTACGTCTCAATCGATCGACGATTTGACCCTCATGTGGGTTTCGCACAACGGAGAATTTCAAAAGATGTACAAGTGTAGATCTTGTCCGTATATAAATCTAAGGAAGAATAATATATACGATCATGAAAAGCTGCACAActcgaatattgaatatatacacaaatgCGCCGACTGTAATTACGCTTGTAACAACCTGGACGTCTATATATCTCACACTAAAGTGCACAGAGATGATTATGCAAAAGTATATTATCCCGTGGATATGACAAAAACTGATGAAGTGCAAATTTTAGAACTGAAAGATTCGAGAAACGAAGACGAATGTTGTAGATCGGACAAAGACAACAAGAAATTGGTTAAGATGTTATACTTCTGTTCGGATTGTCCGGCGAGATTCTTGTTCGAGAAAGAGCTGCAGATACATTATAAGTTTCATTGCTTGAGGTTACCGTATCAGTGCGTTAATTGTTCGTATACGGCGCGACAACACGCACATCTGCTAGCTCATAATAACGTACATTCCAAAGAGTTTCAAGATAAAACCAAATCGCTACAAGAGCTGCATAGTACTAATCCGGAACATCCTCAACCTAAAATAGTAGCCGTGATGTTAGATTTGAACGATGCCAATCCCGTTTGGATCGCAGTAGCggacataaataaacaaaacgaaACCGTGGAACCAGTACAAGAAGCTCCAGTAAAAAATTCTGGAGCTAAACAACACATGTGCAATCAATGTCCGGCCCGGTTCTTCAAAAGCGCAGCTCTCAACTATCACATTACGTTACACGGTGGTGAAGGGCTTTATAAATGCAGGCAATGCGACTACGCCGTTAAAACGGTCGGAAACTTGGCGAAACACGAAGTCGTACACGGTCCTGCGTCTCAAGCGGACTACGAATCCGGAGATGATCTTAGCTTGAAAAACGTACCTATATCTGGAACGGACTTATATCAGCAAAAAACGAAAGCGGAGAAGCGAGCGTTATCTGAAAAGCTAATCACGAGACCGAACGATCATTTTCCTCCCGTTTTACAAGCAGATCCTCAATTCGGTCTATTGATGCACGGTAATCCAGACTTTATCTATCcgacttatttaaaaaacggaAGGCCTAAAGAAAAGCGGTATAAATGCCACAAATGTCCATCTGCTTTCGAAAAACGAGAGCAGTATAAAGTCCATCTGTCGCTACACGGTTCTAAACAGCGATACAAATGCGAGATTTGCGATTATTCGGTGAAATATTACGCAAATTACGTGCAACATATGAGGAAGCATCAGATGAACGCCGACGCTCAAGCGGCTCGTCAAGGATCAAATAAATCGGACGCAGTAGAAACCATCTCGAAGAAGAGCGATACGAAATTTGCCATCAAGAGTCTCCCGAAGCAGACGTATAAAGATTCATCGAAGATGTCGATAAGCGATCAGCAGACTTTGAGGCTTTTGCATCGGCGGCGTTCTAGCGTTGCCAGCGCAAAGGAAGTCGTCGACGAACGGAAAGTTTATAGATGCACGCATTGTCCGTACACGAACCAGAGACGAGACGCTCTGGATAATCATACAAGGAGACACGCCACCGTCTCCGGAgtcaatacaaattttatgtGCCATTATTGCGATTACGCAGCGCCTCAATCGCAGTTTTTACGAGATCATATGAAAGTACATTTCCACCAACCCAAGCATATCAATCCGGAGTACTTTGCCAATTTCGAAGGGTTGGAgatatttattagcaaaatttacGATAAGGAAACGGACGCGCCGATCGATAGTAAAAAACACTTGTTCACGATCAAAGAGAACTTGGACATATCCAACTTGAACGAGAGCGGTAACAAGATCTACGTGGTTCCCACTAGCGGCGAAAGAGTTCAGTGA
Protein Sequence: MASPSMVQRSGDTLIVRSVVSGDRLYLESGAPVAEPSPPASPPIQDEVDETELPQCKIKRNYDCADCDYFTQNPRHYLSHLRDVHGEKVKIYDCPHCLYASKHYQKLLRHMKMVHGVGKGAEEATAEVERKRRAPKAEPEPEEECDLEDPESGGEPGPAKKAKTELECSMCDFAANSHNQLTRHERKEHLKTKFFPCSKCNYVTHIKARFTKHVKYHSMPMIKCEVCDFRTPYKWNLDRHMKNHGGTGAFCCSACNFTADIKQSLTVHEMNHHVPAVGGGAAGGGGSNGTPPPPRRRNRVGGSDSLPAVGPSSPRAPRARRSRPRSKPAELERISPEPESFSDLAEITLAERVEPEEEPKAPKKTPRPIPNLIPLQVNGVPPPLKSATPLDLCTSFKNEDNDEEQQSRPTLKKKSTSIFEKLYKEKLMTVGDDRISPKPPSVEGKRINGLSTETSRISGSGSTRCQRCRHRCKSSNDLVLHMQTCVAKRDEAEAPAIPASEEEGSADDPQAPHPMENVVFVWNSMLKKTDSFDDSEQHFDGAAVASSSTPKREKEAAGGKRVFKCPHCSFWASTASRFHVHIVGHLNRKPFECSLCSYKSNWRWDITKHIRLKSVRDPDHAKARVLMTDETGRRNYSKYNKYLTLTCNMRVSDTSADAVGATGSRKSREMIRVVPDAFETDMQPATSGDNVKPFVDIKLDERKNTNEVCVEAKKTKKTMWKCKKCDYRNASKDALLMHVRKHSKSSAAQPRQEKQADASDMSEVSGASDVSSISYRCGHCNQVSNWKHVIQRHCRLKHNGDVKVVVGMKNSCDKQSNSPNGASSYDMKCSKCPFTTTTKYLYESHLKQHTINSDSNFKCFICPYYVKSETDLIQHLPLHGISEPEKYGAQIVNCKPPVGETVQMKRYRCSDCPYESNSKSQFTYHEQFHKAHNAPFKCEICNYQVTKRHLLHQHMKVHGFTLSNIISIEPNAQSTSQSIDDLTLMWVSHNGEFQKMYKCRSCPYINLRKNNIYDHEKLHNSNIEYIHKCADCNYACNNLDVYISHTKVHRDDYAKVYYPVDMTKTDEVQILELKDSRNEDECCRSDKDNKKLVKMLYFCSDCPARFLFEKELQIHYKFHCLRLPYQCVNCSYTARQHAHLLAHNNVHSKEFQDKTKSLQELHSTNPEHPQPKIVAVMLDLNDANPVWIAVADINKQNETVEPVQEAPVKNSGAKQHMCNQCPARFFKSAALNYHITLHGGEGLYKCRQCDYAVKTVGNLAKHEVVHGPASQADYESGDDLSLKNVPISGTDLYQQKTKAEKRALSEKLITRPNDHFPPVLQADPQFGLLMHGNPDFIYPTYLKNGRPKEKRYKCHKCPSAFEKREQYKVHLSLHGSKQRYKCEICDYSVKYYANYVQHMRKHQMNADAQAARQGSNKSDAVETISKKSDTKFAIKSLPKQTYKDSSKMSISDQQTLRLLHRRRSSVASAKEVVDERKVYRCTHCPYTNQRRDALDNHTRRHATVSGVNTNFMCHYCDYAAPQSQFLRDHMKVHFHQPKHINPEYFANFEGLEIFISKIYDKETDAPIDSKKHLFTIKENLDISNLNESGNKIYVVPTSGERVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -