Basic Information

Insect: Plectrocnemia conspersa
Gene Symbol: -
Assembly: GCA_009617715.1
Location: VTFK01000009.1:468816-476917[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.01 0.9 10.5 1.2 3 21 1020 1038 1019 1039 0.93

2 10 7.2e-05 0.0063 17.3 1.4 2 23 1201 1222 1200 1222 0.97

3 10 0.00072 0.063 14.2 2.4 2 23 1248 1269 1247 1269 0.96

4 10 0.00077 0.068 14.1 4.7 1 23 1290 1312 1290 1312 0.98

5 10 0.00066 0.058 14.3 4.3 2 23 1333 1354 1333 1354 0.96

6 10 0.0097 0.85 10.6 3.8 3 23 1384 1404 1383 1404 0.97

7 10 0.022 1.9 9.5 1.0 1 21 1424 1444 1424 1445 0.94

8 10 0.13 12 7.0 0.2 6 23 1686 1703 1686 1703 0.99

9 10 0.0034 0.3 12.0 1.2 5 23 1713 1732 1710 1732 0.94

10 10 0.0037 0.32 11.9 1.4 1 23 1738 1760 1738 1760 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.01	0.9	10.5	1.2	3	21	1020	1038	1019	1039	0.93
2	10	7.2e-05	0.0063	17.3	1.4	2	23	1201	1222	1200	1222	0.97
3	10	0.00072	0.063	14.2	2.4	2	23	1248	1269	1247	1269	0.96
4	10	0.00077	0.068	14.1	4.7	1	23	1290	1312	1290	1312	0.98
5	10	0.00066	0.058	14.3	4.3	2	23	1333	1354	1333	1354	0.96
6	10	0.0097	0.85	10.6	3.8	3	23	1384	1404	1383	1404	0.97
7	10	0.022	1.9	9.5	1.0	1	21	1424	1444	1424	1445	0.94
8	10	0.13	12	7.0	0.2	6	23	1686	1703	1686	1703	0.99
9	10	0.0034	0.3	12.0	1.2	5	23	1713	1732	1710	1732	0.94
10	10	0.0037	0.32	11.9	1.4	1	23	1738	1760	1738	1760	0.99

Sequence Information

Coding Sequence: ATGGACAAAAAGAAAGATGCCAATGATATTAGTGATGATGGAGATTCTTCGATGAACGTAAGCGCCATGGACATCTCTGATCCGAATCCTGATAATTCAATCAACTATCAAACAGCCGACGAAGATAACTCTCGGTATTTTTCTGTCATCGAAGACGATTCCACCCTCGAAGACATTACCGGTAAAGATTTCTCCTTACCCGAGTCTGAGCAAAGTACGATGACTATACAATGTGACGACAAGACAGTCGAGAGTGTCAATCTGTCTCAATCTGGCATCGATAACGTTGAAAATTCAACAGATATTGTCTCCGACGAAATTGCAATTTTCGACGAAAAGAGCATGCTAACCATACAATCTGAGGACAAATCGATGGATAGTGTCAATGTCCCTCAAGAAAAAGATTCTAATGTTACCAAATTAGATACTCATGAAAACTTAGATGATTTAACAAACGCGGATATTTTCGACGATAAGAGCTTGACTATAGAGTCTGAAGATCTGAAGTCAATTGATAGCAATCAAATATCGATTGTTGAAAACGTCGATGATTCAACAAACATCGTTTCGGAAACTGACGATGCTTTTGAAGATAAAAGCATGACTTCAACACAATGCGATGATATTGTCGATGACGCGCAAGTGAGCGAAATCCATGTGAACGAAAACGTTGTCGATTCGACAAACATTTCATGTGAAGTTGATGATATTTTTGACGATCAAAGCACTAAAACTATACATTGTGATGATAAGTCAGTCGATGACGTCAGTGTTCAACAAGTCAGCAAATTCAATGTGCATGAAAATGTTGACGATTCAACAACCATTGTTTCTGGAGATGTTGATATTTTCGATGATAACGAAAGCTCAGTCGATGGACACGATTTAGTCATCGACGACGATCCTCAACCTTCTGTTAAATCGGACGATTGTCAAGAATCAGCGGATgctcaatataaatatgaagaaGATGCGTCTCAAGAGAACAACGTAATAACCATCAAAGACACTAATTTTAGCATGCTGAAGAAAAATCATTTCGCTAGCGGGCTTTTGGATGCTATCGAAAACACCAACATGTCCCAAGGAACCAACGACAGCGATTCGCGCGCCAGCTGCAAAGTCGATATCAAAGATCTGTTCGGGGATTCCGAAGAGAACGGCCTCAAGTCTGATAGCTACAACTTCCCAGAAGGGAGTCATCGCGTCACCCTTCAGATGGACGGAAGAGACATCGAAGCAATTAACATCGGAcaagatatatacatttacgagAACGAGGGAGCGCTCACCGCCTTTCAAGTTTTGAAAGAGGATGGGAATTCCAAGATTAAATTTCTCAACATCACcaaaaacgACGATGGTAATATCGAACTTTATGAAGAACAAGTAAACCAAGTTCCTGTTACTAATGAAGATTCTGTCGAAGTCGCAGAAAAGaATAAATCTGATGGTAGCACAGTAGTAGAGCAACATAAAGTGCCCGAAATGGAAAAGAACTCTCATCGAGTTATCCAAGCCATTACTAATCAAGGGAAGAAGAGCCCGTTGATTGATAACACTAGCAATACTTCTCCAGTGAAGATCATAGATATACCTAATGTTGATTGCAAGAAAGTCGAAGATGAATCAGAAGTCTTAAAAGTCGGAATCAAATTAGACGAAAATAGTTCAGCAGAAAAGCTTTTAGGCGATCTTCAAAACGGTGAAGTTTTAAAAGCAAATGAGGATATTGAAAAAATCGACGATTTCCAGAAGGAACTGGTGTCAATTATGGACGGCGGGGACAACGATAACATGGAAGAGGAAGATAAAATTACTTTGTATGCTAGTCGTGATAACGAAGAGTCGACAGTAGTAAAATTGAAGAAGTTTAATGAAGATTTGTCAAATTCCCCAATAAAGTCGCTCTCACCGAGagaagaaaatgaaaaaattattcctCCAACCGTCGACTCTGATGATGATGAATCTAGTATAATTGAAGGTGAGCCAGTTACTGGCGATTGCGAGCTAGAATGGATTATGAAAGATGCGAACGATACTAATAAagtagatgaaaataaaattgctccAGCAGTCCAACCTCAATCATCCCCAAATGTTATAAATGAAGATATAGTCCAAGTAGAGAAAAATAAAGCtgaatgcaattttaatattgctgTTCAAAAAACACTGTTAGCGAATGACGTTGCAATAAAAAagattgataaaaaatcagAGACTGTTTTATCGATTGAAGAAGGAACGACTTTGGACGATATAGACTCTTTTGAACCAGTCGTTAATAGAAATGTTTTTGCCGTGAAAACATATTCAAAAGAATCAAAGTTAAAAACCAaacttaaaaatcaaatcaGTTCATCGTCGGAAGACTGTGCAGTGACTGTTACAAATGCTGAAATTACAAATAGCAATTCTAACGGTATAGAAAGCAATCTAAAAAAGGACTTGTCACCGTCGTTAAAAAATAGACAACCGAGAAAACAAATATTCACACCGGTGGCTACTTCAGACATTGAAatcatatttcttaataataaaaataagcctACCGAATCACAAGATGAATCAGTGATCAAATCGCCACTCAAGGTGAAGGAGGAGTTGTCTAGTTCCGATCGAAGGAAGAGAGGACGGCCGAAGAGGATTATTTCTGAATCTACCGAAGTTAAGACGCCCGAAGAACAATCGGATACTGTCACTTCTATACCTGATGACGATTTAATATCGACGGATGATAGTAAATCttcaaataataaagaaaatgattCGGCACTCGTTCAAAATGCTGATGCCGCTGCAGCTGTAATAGAGAAACAGTCAACGGAGAACGTCGATATTAAAACAGATGAACATATTGGTGAAAAGGTGAACGTTCCATCCACTTCGGGTAAGAGAAAGAAAGGTCGCCCAAAGAAGATTCTGTCTTCAAGTTTTTGCAGTGCAATGGAAGACGTGAAAGTCGAGGTATCAAGGAAATCTCTACCGATTATGTTTCATAATCCATCGTCGAATTCCTCCGAATTGAAATCAGAAgatgatgaaaatatttgtccgctatgcaataaaaattttagaagtaaaaatgttttatttaaacatgcAAAACATTGCTGCGGTGTAACTGAGATTGTTAAATCGCCGAAGCGTAAAAAGCTCAGTACCGATTGTAATGAAACTCCATCGACTGAAGTTGAATGTAAGCCATCGATTGTGAAAGAAATTGTAGAGGAAAATATTCGAGAAAAGTCGGTAGATAAAGAAAAGCATAAGGAAAAGGTTAAGGATAGTCAAGAATCGTCATCAGGTAAAGAAATGCGTAAGGAGAAGATCAAAGATGATAAAAAACCGTCATTAGATAAAGAAATACGTAAAGCAAAGATCGAAGATAGTCAAGAATCGTCAAAAGATAAAGAAATGCATAAAGAGAAGGTCGAAGTTAGCCAAGAATCTTTGTTAGATAGAGAGAGAGTCGAAATAAAGAATCCCGCAATGAAGCGATGCAAAGTCGAGTCAAAGAGCAGTGTCATGGCCTCGCCCATGACTAGGCTTTCTAAGATAATGAAAATGAAACCGCCACTTCTTCAAATCATTAAATGTGAAATTTGTGGCAAGATTTTCCGACAGCTCGCACATAAAGTCAATCATCAAAGATCGCACGCTAAAGAAAAAATAGTCAAGAAAGAAGAGGTGATCGTTAAAGAAGATAAGGATGTTGAATCTGATACTATTTTGAAGTGCGAAGTGTGCCAGAAGGGCTTTAGAAAACTCCATCATCTTGTGGCGCATCGTGAGGTTCATAATGAGGTCAAATCTCGTCGCACTTCTTTGAGCGTTAGAAGCAACGAGTCCGAAGCTGGTTTTCGTTGTGAAATCTGCGAGAAATCATTTCGCAAGATGCATCATTTGGTGGAGCATCGACAATTGCATGTCGCGGAATCGGCAAACGGCGTCGAAGTTAAAATACCGACTGTCGCCGAAGAAAATGCTACTTGTAACGGCTGTGGAAAGTCTTTCAGGAAACGTCATCACATGATCGAACATCGAGATGTCCACTGCTCGCCTTCTAAGATAAAGAAGGATAGCTCGGATGCTAATTTACGATTGTCGATCACTAGTATTAATAGTGACGACAGTAATAATTGCAGCATATGCGGCAAGTCATATCGGAAACTGCATCATATGGTGGAACACCGAGAGAGCCATGCAGAGACAAGTGCAAGCAAATCAGTTCTCGATAGATTGAGCACGAAGGATATCATACACGAGTGTTCAAAATGTTACATGGTTTTCCCGAATACCAACTCTTTAGATAAACACATGACTAAATGCCTCACTAGAAAATTGGCCAGGAGGACTATAATAGGCGGGGAAGCCGTTCAAGATAAACCTGTCTCGCTCATACCTAAGAGGAAAAGCGTCGATTCTACGACAAAAGAATCTGTGGCGAAACGAGTAGTCAATAAAGAAGTTGTTAGATCTAACATTATTCTaagaaaaagtataattaaagtGCCTGTCAAAAGTACGACTAAAATTCCTTCCGTCGCTCAAGCTAAGAGGGCCAAATTAGATACAGAAGAAAACGAGACCAATGAACAGTACAAAGAAtccgatgatgatgatgatgatgatgaagaAGAGAATGTAAGATATAGTCTTAATCCTGATTACAAATCATCGCCTGATTGCTCGGAACAATCCGCACCGGATACTACAGATACCAAAGggatagagagagagagtgaaACGAATACGTCTGAAGATGAATCGACCAGGTATTCGTTTCCGATTAGTCTGAAAGATAAGGAAGCGCCCAAATCTACTACTAAAGCCCCAGTTTCACCCGCGAAGCCGATAAAAAGGTCTGTCGGAGCGCCTAGAAAATCGATTATAACAACTGTAGCGACACCAAAGAAAACTATGTTGCCAAGGAGGGACACTAGGAAGAGCGCTGTCACTTTGTTGGTCAAGAGAGCGTCACTTGGCGGAAGAAAGACGCTAGAGAGTAGAAAGCTTCCGGCACCCAAGAAGCTGCAGTTGAGATGCTGCGGCCAAATTTTCCAAACTCAGGCGTCGTTAGCATTACACCGAAAGTCTCACAAAgtggCTCACAAGGTTCACAAGTGCGATTGTGGTAAACAATTTGAAAACGAGATACTGTTGAAGCGCCATATGGATACCGAGCACACTCCTCCCAAGTCTTTTAAGTGTCAGTACTGCGACGTGTCGATGCGAACGGCGGCTCAGTATGCCAAGCATAAGAAAACTCACGACGATAATAAAGCATCCACGGCACAGGTGAATAAAGTAGCGCGGAAGTCGCTCCGGGGAGGCGTTAGCGAAGTTACCGCCGACAAGAAAACTATCACGGCACCGACGCCTATGACGATCAGGAAGAAACGGAGAATCGCCCACGGCGGAGTGCCGCTCTCTGAAAAGATGAAGAAAGCCCTGGCCAATGccaagttttaa
Protein Sequence: MDKKKDANDISDDGDSSMNVSAMDISDPNPDNSINYQTADEDNSRYFSVIEDDSTLEDITGKDFSLPESEQSTMTIQCDDKTVESVNLSQSGIDNVENSTDIVSDEIAIFDEKSMLTIQSEDKSMDSVNVPQEKDSNVTKLDTHENLDDLTNADIFDDKSLTIESEDLKSIDSNQISIVENVDDSTNIVSETDDAFEDKSMTSTQCDDIVDDAQVSEIHVNENVVDSTNISCEVDDIFDDQSTKTIHCDDKSVDDVSVQQVSKFNVHENVDDSTTIVSGDVDIFDDNESSVDGHDLVIDDDPQPSVKSDDCQESADAQYKYEEDASQENNVITIKDTNFSMLKKNHFASGLLDAIENTNMSQGTNDSDSRASCKVDIKDLFGDSEENGLKSDSYNFPEGSHRVTLQMDGRDIEAINIGQDIYIYENEGALTAFQVLKEDGNSKIKFLNITKNDDGNIELYEEQVNQVPVTNEDSVEVAEKNKSDGSTVVEQHKVPEMEKNSHRVIQAITNQGKKSPLIDNTSNTSPVKIIDIPNVDCKKVEDESEVLKVGIKLDENSSAEKLLGDLQNGEVLKANEDIEKIDDFQKELVSIMDGGDNDNMEEEDKITLYASRDNEESTVVKLKKFNEDLSNSPIKSLSPREENEKIIPPTVDSDDDESSIIEGEPVTGDCELEWIMKDANDTNKVDENKIAPAVQPQSSPNVINEDIVQVEKNKAECNFNIAVQKTLLANDVAIKKIDKKSETVLSIEEGTTLDDIDSFEPVVNRNVFAVKTYSKESKLKTKLKNQISSSSEDCAVTVTNAEITNSNSNGIESNLKKDLSPSLKNRQPRKQIFTPVATSDIEIIFLNNKNKPTESQDESVIKSPLKVKEELSSSDRRKRGRPKRIISESTEVKTPEEQSDTVTSIPDDDLISTDDSKSSNNKENDSALVQNADAAAAVIEKQSTENVDIKTDEHIGEKVNVPSTSGKRKKGRPKKILSSSFCSAMEDVKVEVSRKSLPIMFHNPSSNSSELKSEDDENICPLCNKNFRSKNVLFKHAKHCCGVTEIVKSPKRKKLSTDCNETPSTEVECKPSIVKEIVEENIREKSVDKEKHKEKVKDSQESSSGKEMRKEKIKDDKKPSLDKEIRKAKIEDSQESSKDKEMHKEKVEVSQESLLDRERVEIKNPAMKRCKVESKSSVMASPMTRLSKIMKMKPPLLQIIKCEICGKIFRQLAHKVNHQRSHAKEKIVKKEEVIVKEDKDVESDTILKCEVCQKGFRKLHHLVAHREVHNEVKSRRTSLSVRSNESEAGFRCEICEKSFRKMHHLVEHRQLHVAESANGVEVKIPTVAEENATCNGCGKSFRKRHHMIEHRDVHCSPSKIKKDSSDANLRLSITSINSDDSNNCSICGKSYRKLHHMVEHRESHAETSASKSVLDRLSTKDIIHECSKCYMVFPNTNSLDKHMTKCLTRKLARRTIIGGEAVQDKPVSLIPKRKSVDSTTKESVAKRVVNKEVVRSNIILRKSIIKVPVKSTTKIPSVAQAKRAKLDTEENETNEQYKESDDDDDDDEEENVRYSLNPDYKSSPDCSEQSAPDTTDTKGIERESETNTSEDESTRYSFPISLKDKEAPKSTTKAPVSPAKPIKRSVGAPRKSIITTVATPKKTMLPRRDTRKSAVTLLVKRASLGGRKTLESRKLPAPKKLQLRCCGQIFQTQASLALHRKSHKVAHKVHKCDCGKQFENEILLKRHMDTEHTPPKSFKCQYCDVSMRTAAQYAKHKKTHDDNKASTAQVNKVARKSLRGGVSEVTADKKTITAPTPMTIRKKRRIAHGGVPLSEKMKKALANAKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -