Pcon005488.1
Basic Information
- Insect
- Plectrocnemia conspersa
- Gene Symbol
- ZNF217
- Assembly
- GCA_009617715.1
- Location
- VTFK01000039.1:620749-622158[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00059 0.052 14.4 0.5 2 23 150 171 149 171 0.98 2 11 2.4e-05 0.0021 18.8 1.9 1 23 177 200 177 200 0.96 3 11 7.2e-08 6.3e-06 26.8 0.5 1 23 211 233 211 233 0.99 4 11 0.00095 0.083 13.8 1.7 1 23 239 261 239 261 0.98 5 11 9.1e-07 8e-05 23.3 1.2 1 23 267 289 267 289 0.98 6 11 5.2e-05 0.0046 17.7 0.2 1 23 295 317 295 317 0.97 7 11 0.00012 0.011 16.6 0.1 1 23 323 346 323 346 0.96 8 11 0.011 0.95 10.5 0.2 2 12 352 362 351 370 0.77 9 11 3.3e-05 0.0029 18.4 2.3 1 23 376 398 376 398 0.98 10 11 0.23 20 6.3 1.5 1 23 404 428 404 428 0.94 11 11 0.0037 0.33 11.9 5.9 1 23 434 457 434 457 0.97
Sequence Information
- Coding Sequence
- ATGTCGTGCACTAAATTCAATTTAGTTTGCCGTATATGTCTCgaggaaaatgaaaaaatgttttctctCATTGAAGAATCTGATAGTTGTTCGAATCTCAAAGTTAAGTTCGAAATTTGTACACGGATCACTCTTTTGAACGGCGATGGTTTATCAGAATTTATTTGTGTCACTTGTCTTAAACATTTAGAACTATCGTACGATTTTTACGAAAAGAGTCAAAAGGCTGATCAATATCTGCGCAATCTCATTAATGATGACACAATTAAAGAGGAAATCaaggaagaaataaaaatgaacgatTCTGATTGCGCTAATTCGATTTTCAACGGAAACGACACGGATGATTCGTCCGATAAAGATGTTATTAAGAAACGTAAGGTTAGACGGCAAACTAttgaaaaaacatcaaaaaagaaTAAAGAAGACAGTTATAAAGGACCTTCTCAATGCGACATATGCGGATTGAAAGTTCAAAGTCATTCCGCTATGGTTATACATATGCGTACGCACACTGGCGAAAAACCTTACAAATGCTCTTCTTGCGCTCGTAGCTTCACACAGAAATCGTCATTGAGAATACATTACGACCGGTTGcatttaaagaaaaagtataACATCAACAAAGATTACACTTGCGAGAGTTGTGGAAAAACGTTTGCaagtagtaataatttaaaaatacatctcCGAATACACACCGGCGAAATGCCCTACGAGTGTATGTTTTGCTCGAAGCGATTTATGCAATTGGGCTCTTTGAATGGACACAAGCGCAGACATACTGGAGAAAAACCGTACATATGTAAAGTATGCGGAAAAGGATTCGTAGAACAGAATCACTTGAAACGGCACCAGAGCGTTCACAGCGAAGAGAAGCCGTTCGTTTGTAACATATGCGGAAAAGGTGTCAAGTCACCGTTCGCTCTTAAGCAACACTCTAAGCTGCACACAAATGAAAAGGAACACATATGCGACCAATGCGGCATGTCTTTCATGATAAAGGGAAATCTAGACGCCCACATCAGGGTCGTCCACTCTGAGCGTTCAGGACAATGCGACATTTGCGACAAAACATTTTCGAACATCGCCGATCATATGGTAAAACACACAGGCGAAAAACCTTTCCAATGCGAGGTATGCAGTAAAAGGTTTTCGCATAACCGGGGCCTCATCGTTCACAGTAGACAACACACGTCGGGAAATAAGTACAAATGTAACGTGGACGGTTGCAATCAATCTTTTTACGCTCAGTGGGTTTTGAAGTGTCATCTGATGAAGCACGCCGGTCACACTCCGTTTTCTTGCAACTATTGCTCCAAAGGATTCTTGAGAGTTTGCCATTTGACAAAGCATATGAAAATTAATCATCCAGATAAGATCAAAAATGAAAAGTCTGTAgatttataa
- Protein Sequence
- MSCTKFNLVCRICLEENEKMFSLIEESDSCSNLKVKFEICTRITLLNGDGLSEFICVTCLKHLELSYDFYEKSQKADQYLRNLINDDTIKEEIKEEIKMNDSDCANSIFNGNDTDDSSDKDVIKKRKVRRQTIEKTSKKNKEDSYKGPSQCDICGLKVQSHSAMVIHMRTHTGEKPYKCSSCARSFTQKSSLRIHYDRLHLKKKYNINKDYTCESCGKTFASSNNLKIHLRIHTGEMPYECMFCSKRFMQLGSLNGHKRRHTGEKPYICKVCGKGFVEQNHLKRHQSVHSEEKPFVCNICGKGVKSPFALKQHSKLHTNEKEHICDQCGMSFMIKGNLDAHIRVVHSERSGQCDICDKTFSNIADHMVKHTGEKPFQCEVCSKRFSHNRGLIVHSRQHTSGNKYKCNVDGCNQSFYAQWVLKCHLMKHAGHTPFSCNYCSKGFLRVCHLTKHMKINHPDKIKNEKSVDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -