Pcon020688.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Plectrocnemia conspersa
Gene Symbol
zfy1
Assembly
GCA_009617715.1
Location
VTFK01000113.1:588232-592313[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.0023 0.2 12.6 0.6 3 23 41 62 40 62 0.96
2 22 0.3 26 5.9 1.9 2 21 336 355 335 356 0.92
3 22 0.059 5.2 8.2 0.4 1 21 364 384 364 385 0.96
4 22 2 1.8e+02 3.3 0.8 1 23 434 457 434 457 0.88
5 22 0.046 4 8.5 2.8 2 21 468 487 467 488 0.94
6 22 1.2 1e+02 4.0 0.1 3 23 497 518 495 518 0.88
7 22 0.0011 0.095 13.6 0.9 3 23 539 560 537 560 0.96
8 22 0.0013 0.11 13.4 2.1 3 23 568 589 566 589 0.93
9 22 0.0072 0.63 11.0 0.1 1 23 612 635 612 636 0.96
10 22 0.086 7.5 7.6 0.1 1 23 640 662 640 662 0.96
11 22 0.00015 0.013 16.3 3.2 1 23 668 691 668 691 0.95
12 22 0.00039 0.034 15.0 1.4 1 23 705 727 705 727 0.98
13 22 0.0019 0.16 12.9 2.0 1 23 772 795 772 795 0.97
14 22 4.3e-05 0.0038 18.0 0.9 1 23 851 874 851 874 0.98
15 22 0.00094 0.083 13.8 1.3 2 23 908 930 907 930 0.96
16 22 0.0064 0.56 11.2 1.2 1 20 987 1006 987 1008 0.94
17 22 4.4e-05 0.0039 18.0 0.2 1 23 1017 1039 1017 1039 0.94
18 22 0.024 2.1 9.4 0.2 3 23 1138 1159 1137 1159 0.89
19 22 3.6e-08 3.2e-06 27.7 0.9 2 23 1165 1186 1164 1186 0.97
20 22 0.059 5.2 8.1 4.3 1 23 1218 1241 1218 1241 0.97
21 22 1.5e-05 0.0013 19.4 1.9 1 23 1287 1310 1287 1310 0.98
22 22 0.0024 0.21 12.5 0.5 2 23 1319 1341 1318 1341 0.93

Sequence Information

Coding Sequence
ATGCTTaGTGATGAAGAAAACTATTACGGAAATGAGGCATCGCCAGCTGAGAAGGCGGCCGTCGGCAAAGAAAACGTGGGGCATCGTACCGTCGCCGTCGAGCAGTTGGCCTCAAAGGACTGCTTGGTCTGCGGCCGAGCTTATCGCTATTCACACAACGCGCGTCGACACGAACGCGTCGCTCACGCCTACGACCGCTACACCAACACTATCGATCCTTCTACAGTTTGCATAAAGAATACCCCGTTCAAAACCAAAACCAATACTGAAAACGATATAATCAAAAACAACTACAGAAAGCCCTCTCAAGAGGGAGATTATCTCACGAACTACAATCAAGCTgagattttaaaatctttattaactGCTAAAATGGAGAATGAAACATCCGATTCCGATTCACGGTCCGATAGTTCTGAATCTGTGGCTTCCGACGAACCTGATATTTCATCGTATCAAGTCGAAACGATTCTATCGGTTCCCAAGAATTATTCAGATGATTCGTCGGACGATGAGAACGATCACGAAATGGGAATGAGAGGCGGCATCGGATCTGAAGTGGAAGTCAATATAAATTCAGAATTAGATATTAATAGAATAATCGGAATCGAAGAAGAAGATGACGATGAACCAATAGACGGGCAGCAACCTGAACTAATCGAAGATGTACCTCCCATTGCTGATAATGTAGAAGTTGATAACATTTCTGAAATCGACAGACCGACAGTTCCCGATTGCGATAGTAAATTGGAGAGCGAAGAAGAGAGTCAAGATGAGGACGACGATGACATGCAAATACCTTTAGTGCCCATTatcgaaataaatgaaaatccaTTGCGTCATGACTTAGACGAAAGCGGCGACGATGAGTCCGATAACGAATCTTGCGAACGGATCGAGACCTCCGTCGTCGATAGCCTTCACAATGAGTTGATCACCATTACGCCTGCACAAAAAGTGTTTATCGAGAAACACAGAGATTTAATTGAACAAATCAATACCATGAAGTGCAAATGCTGTGATAAAAACTTTCCCAGGCGGAAGGCCGTCATCCAGCATTTACAGAAGAACGGTCGTAAAATTCCAAAACACACTTGCTACACTTGCGTCATACCTTTCTCTCATATCGGCGCTCTCTTATCTCACATGCGATACAACTGCTGCAACGATACGTGGAAGTTGATATACAGAGAAGGCGGTATACCGGACAATATGGTCATTGACGATAACGCCGATATGATCGATAACATTgacgaaaatttaaaatctcaGTATAAAGATATCTTAAATGCAAGAACGTACGTCTGTAAATTATGCTCGGCAAAGTATCGTCTGAAGCAGTTTatcatgaaacatatttttgacgCACATGAAAGTGCAGCTACTCAAGTGCAACCGCTGACATGTTTCCATTGCAAATATAAGTTTATGGACAATAGGCTGTGGAAGAAACATTTGAGGAACGGAGAGTGTACGGTGTTGATTGATTGCGATATGTGCTCGGCGAAGTTTGAATCTATGAAAGATTTCAATGATCACGCTATCGCCGATCACGCTGACGATTTTGTAAATCAAGAAAAAGAATTCCGTATCACAGATGGACGACCGACCAATTGTCCTATATGCGCTAAGAATCTATCTAATTACCATAATTTggtgaaacatttaaaaatggttcACAACGAAGAGAAACCTCACTTGTGCCAGTATTGTGACACCAGATTTGAACAGATCTCTGAATTAAATCACCATATTTATATCGATCACGATGATAAGTTTCCTAACGGTGACGATATGGAATACAACGATAAGGATGAAGTGACGGTTTATAATTATTCTTGCACCGAATGCGATGCAGTTTTTGAGTCAGTGGAATTGTGGACCGAGCATCAGATAAGCGTTCATCATCATGTCGCTTACGAGTGTGATCGGTGTGAAAAGAAATTCTGGGATGAGATGGAGCTGGAGGAGCATAAAGctgttcattttaaaaataagatttataaatgCACTCATTGTTCGAATTCATTCAGCTCGTCCCAGAATCTCGCCGAGCATATGACACAGTATCATAGGTTATCTTCGGCGCCTGACAGGTCTTATGAGTCACAATTCTATTGCGAGATTTGCATTAGATCGTTTAAGAGTAGGCAAGCGTTTTCAAATCATATGCGGATCCATGCTAAGGTTCCGACTACTAATCGCCGAGCCGGAGAAATAAAACGATCGATGTCTGATTCACCGCACCAGAACAAAGCGGTGCGTATTCAATCCCAGAACAATAAAGTCATCCGACACGTCGACCCCGCTCCATATTCATGTGATATATGCGGGAAAGGATTTTTGCATAAGAAGAACATTTGGAAACACAAAAAGATGCTACATCCCGAAGTCGTGAATAAGACGAAAGAAGTTTCTAATCTTAGAAACGTGTCCACAGAAGAAGAAGATTACACAAATGACGATCAACGCCTTTCCATTCCGCAATTTGATAGTTTTGCTGCTATGTACGATCAACCAGAGAATAGTGGATCCGAAGGTGCCTTGCTTTATCAGTGTGACCTGTGTGATAAACGGTTCGCTGTTAAGAGTAGCATTTGGAAGCATAAGCGAGTCAAACATGGCGTGATGAATCCGCAGCAAGACCTGCCCATAAAGACGGAGATAAAGACTGAACCGGTCAAAGAGAAGGAAAATGCTCGTTTAATACCCTTACCTACCAGCTGCACCATATGTAAGATAGTTTTCAACGATAAGAGAGCGTATTATCGTCATAGGAAAATGATGCACAGCAATAGAAACCAATCAAACTCATCGTCAGATCATTTGGAGAATCAAGTTAAAGATACAGTAATACTTAATGGCAAATCGCAGAAAAAACTATCGGCGCACAGAATGCAGAATTCAAGCGATGAAGATGACGTACCTCACCATCAGAACCATCGCAGAGAAGTCAAATATCCATGTGATACTTGCGGAAAAAATTTCCACGAAGCCGTAACTTTACAGAATCACACATGCCTTCAGCGCACTCCTATCGCTGAAACATACGAATGCGAAATCTGCAATAAGAGTTATACGTCAATATCGGCGTTGAAGAGTCACAGGGGCTGGCATCTCCGATCGCCGGATGGAAGAGCGGCGTTCAGCAATTCTGGCTTATGGATGCCTCAGAATAAAGTTACTAATAAAGTCAGCAAACATGAGGTAATTGAGTCGTTGCGATTAAAAGCGCCGGCACAAAAAGAAATATCACCATTGCATATTAAGAGGAAGCTGCCTCCGGATGTGCAGGTCACACTGCTGAAGAAGAGAAAAGATAACGAAGATGTATCGATAACACCAGTTCAGAGTGTGATATCTCAAGTTGATCCTATTGTACGTCAATTAGCTATTAAAGAAGAGCGATATTGTGAGCCCTGCGCTAAGACGTTTACGAAGAAGGCTGCTTATCAGCGGCACATTGAAGAAGTGCATAAGCATAGCAACGTAGTATGCCCCATATGTAAGAAGAGCTTTACTAGAAAATCGACTCTTCTCGTTCACATGAGGAAGCACGATACTGGCAATATATCGGAACCGCCGGACATGGACGAGAGCGACGATGACGATGATATGGATGAAGATATTCCCGATATTAAACCACCGATTTATAGATGCGAGATTTGTAATATGCAGCATACTTCATCTAAATCGTTGAGACGGCATAGATTGAAGTACCACGGTGGAAGCGTACAGAGACCGCAAGCTCCTAGAAGCGACGACAGGACTATTAAACAAGGCGTTGTCAAGGAATATAAATGTGGATTATGCGAAGATGAATTCGATACTGAGATGCAAGTCTTGAGTCATTCTCATTATCAGTGCACATTTTGCGGATTATACTTCTCGCAGAATCAGAACTTGATGGCGCATACGAAGACACGCCACTCCGACAAGAGCCACACGATAATTCCGTGCAACAAGTGCAATCGTCTCTACATGAACAAGAAGAGTCTACAAAAACACATAGAACTGGTCCACAGTAGTTAA
Protein Sequence
MLSDEENYYGNEASPAEKAAVGKENVGHRTVAVEQLASKDCLVCGRAYRYSHNARRHERVAHAYDRYTNTIDPSTVCIKNTPFKTKTNTENDIIKNNYRKPSQEGDYLTNYNQAEILKSLLTAKMENETSDSDSRSDSSESVASDEPDISSYQVETILSVPKNYSDDSSDDENDHEMGMRGGIGSEVEVNINSELDINRIIGIEEEDDDEPIDGQQPELIEDVPPIADNVEVDNISEIDRPTVPDCDSKLESEEESQDEDDDDMQIPLVPIIEINENPLRHDLDESGDDESDNESCERIETSVVDSLHNELITITPAQKVFIEKHRDLIEQINTMKCKCCDKNFPRRKAVIQHLQKNGRKIPKHTCYTCVIPFSHIGALLSHMRYNCCNDTWKLIYREGGIPDNMVIDDNADMIDNIDENLKSQYKDILNARTYVCKLCSAKYRLKQFIMKHIFDAHESAATQVQPLTCFHCKYKFMDNRLWKKHLRNGECTVLIDCDMCSAKFESMKDFNDHAIADHADDFVNQEKEFRITDGRPTNCPICAKNLSNYHNLVKHLKMVHNEEKPHLCQYCDTRFEQISELNHHIYIDHDDKFPNGDDMEYNDKDEVTVYNYSCTECDAVFESVELWTEHQISVHHHVAYECDRCEKKFWDEMELEEHKAVHFKNKIYKCTHCSNSFSSSQNLAEHMTQYHRLSSAPDRSYESQFYCEICIRSFKSRQAFSNHMRIHAKVPTTNRRAGEIKRSMSDSPHQNKAVRIQSQNNKVIRHVDPAPYSCDICGKGFLHKKNIWKHKKMLHPEVVNKTKEVSNLRNVSTEEEDYTNDDQRLSIPQFDSFAAMYDQPENSGSEGALLYQCDLCDKRFAVKSSIWKHKRVKHGVMNPQQDLPIKTEIKTEPVKEKENARLIPLPTSCTICKIVFNDKRAYYRHRKMMHSNRNQSNSSSDHLENQVKDTVILNGKSQKKLSAHRMQNSSDEDDVPHHQNHRREVKYPCDTCGKNFHEAVTLQNHTCLQRTPIAETYECEICNKSYTSISALKSHRGWHLRSPDGRAAFSNSGLWMPQNKVTNKVSKHEVIESLRLKAPAQKEISPLHIKRKLPPDVQVTLLKKRKDNEDVSITPVQSVISQVDPIVRQLAIKEERYCEPCAKTFTKKAAYQRHIEEVHKHSNVVCPICKKSFTRKSTLLVHMRKHDTGNISEPPDMDESDDDDDMDEDIPDIKPPIYRCEICNMQHTSSKSLRRHRLKYHGGSVQRPQAPRSDDRTIKQGVVKEYKCGLCEDEFDTEMQVLSHSHYQCTFCGLYFSQNQNLMAHTKTRHSDKSHTIIPCNKCNRLYMNKKSLQKHIELVHSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-