Pcon006401.1
Basic Information
- Insect
- Plectrocnemia conspersa
- Gene Symbol
- Snapc4
- Assembly
- GCA_009617715.1
- Location
- VTFK01000003.1:2613187-2615400[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.12 1.6e+02 2.9 0.0 2 18 118 134 117 157 0.79 2 6 0.004 5.4 7.6 0.1 22 44 199 222 192 224 0.89 3 6 1.1e-10 1.5e-07 31.8 0.2 1 44 230 275 230 277 0.95 4 6 2e-09 2.7e-06 27.8 0.1 3 45 286 332 284 333 0.96 5 6 7.8e-07 0.001 19.5 0.0 2 39 340 377 339 379 0.94 6 6 0.001 1.4 9.6 0.0 4 43 391 430 390 432 0.90
Sequence Information
- Coding Sequence
- ATGGACGAAGACGTAGAAAAGTTCGTTCCGACCCTGGACGATCAGATCGCGGTATTATCCGAAGCTCTGGAGACTGCTGAAGATTTAGATTCGCAATTGCATTCGACGTACGTGACGTTCGAAAAACTGTTAACGGAATGCGCAGCGACTCGAACGAAACTTAGAGAGCGACGCGTCTACCTCGAAAACAGGATCAAGAGCTGCAAGCGTCAAAGGGACTCTCGGACTTTTTATAGCAGCAGCGGGCGACCTTATTTCAGAGACAAATCTAACTATCCGTGCCCTTACAACGAAGATGCGATACGTCTGCAGCGCTCTCGCATCCCAGATTTTTACAAATTCAGACGCAGCATGCCGTGGACCAATGGCGAAAAAGATAAATTGCTACAATTCATGTTGAAGCTTTCGCGCGAGAAAAAGATCGAAGAAATCACCGCGAAATACAATAGTATATCTCAATACGTTTCCAGCgatctaaataaatttgacgCAGAAACTATCCAAGAGCAGGAGAATTTAAAACATCTTTTGGACGACGTCTACGATGCGCCGTTGGAATCTGTAGCGCTACCTTTGGACAGATTGGACGAATATAACTGGATCGAAATAGCCAATGAATCTCAAGTGAAGCGCAGTGATCGCGAATGTCGCGCCGTATGGAAAGTCGTACTACATCCGTCCATAAATAAAGGTCTCTGGTCCAAAAAGGAAATAAATCGTCTTACAAATTTAGCCAAGGAATACGAAGCTCGTAATTGGGATTATATAGCCGAAAAATTGGGCACCAACCGCTCTCCATATCAATGCttcatatactataaaaatttcatttataaaagcCTATCGAAAGGAACAAACTGGACTAAAGAAGAGGACGCCTTTTTAGAACACATCATCGAAAATCTCCGAATCGGTGATTATATTCCGTGGGCCAAAGTATCGGCTTATATAGATAAACGTTCCAAGACGCAAGTTTACAATAGATATTTACGACTGAAGGGTAACATCTATAAGAGCGGTTCGTTCGATAAAGAGGAAGACAACGTTATCATAGCCGCCATGAAGTTATACGGCCGCAATACAAGAAAAATAGTGCAGTGTTTGCCCGGAAGATCGATCGCTCAAGTGAGTTACAGAATTGGAATATTAGTCAACGCTAAAACGATCCTTTGGTCGTTATCGGAAGACAGTTACCTTCTTAAATTGATCGGCGACCAACTTCCGGATTATGAAGAGATAAGTAAACATTTCATCGGGAAAAGTCACGCTAACGTCAGACGGCGCTATTTATTATTGACCAGATGGTTGAGGGCCAATCCTTTAAAGACTTTACGCGATTTTCCAAGGCAGGCTACATCGAACCCTTTATCAAATTTAGACACAGCTATGAAACGGCTGAGAAACAGTATCGAAAATAATCCCAAAATAATAAGAACGAATCTGATATTTCGTCGTCCATTGTCAGGAATCGACAGGCAAATATtatcctattttaaaaatcttcccGACAAGAACACAATCATCAACCAAAGCGCAAGATTGCCTATGATGGCGGCCGACGTATGCGAGGTTAGAGCCATTTTACAATTACTAGGAGCAAATCTAAACATGAGTAAGGTCGCTTCGTTGCAGTCTCAAGCTCCCGAAATCGCCAACTTAGCCAAGTGTTTGCTGACCGAAAGCAAGACGTTGGACGCGCCTGTTAAAAAAACCGCAATTAAAACTTATTCTAGAAAAAAAGTACCCGACACTGCCTCCGTGGACAATTTGAAGACTAATAAAAGTGTAGATATATGGAAAAATGACGACAAAATTATTAGGTACTATTTACCTCCGTTCAACGATACCATCACGGCTTTGCGATCCCTATCGCTATTCCGATATACAAAGCGTCAGACTCTGAATATGAACTTTACGATCATGCCTTCTTCGAGTTGCGTTTCCCAAAACAATATGTGGACCGGTCGTGTCGCTGCCATGTTTTTTATGACAAACTTACTCGCTACGTTACATCCGTACGTTAAATCCAAGTTGTTTCACGAAGATCAGGCTCAGATATCGTCCAGAACGGTGACGGACGACTTATTGCTGAATCTcaatttgaatatatacaaaGAAACGGATAAACCTTACCTGGTAGCTTCGAGAAAAAATTATTACagcagaaaaaatacatattctctATCAAAGAGAGCATCGCCCAATGAAAAGTGA
- Protein Sequence
- MDEDVEKFVPTLDDQIAVLSEALETAEDLDSQLHSTYVTFEKLLTECAATRTKLRERRVYLENRIKSCKRQRDSRTFYSSSGRPYFRDKSNYPCPYNEDAIRLQRSRIPDFYKFRRSMPWTNGEKDKLLQFMLKLSREKKIEEITAKYNSISQYVSSDLNKFDAETIQEQENLKHLLDDVYDAPLESVALPLDRLDEYNWIEIANESQVKRSDRECRAVWKVVLHPSINKGLWSKKEINRLTNLAKEYEARNWDYIAEKLGTNRSPYQCFIYYKNFIYKSLSKGTNWTKEEDAFLEHIIENLRIGDYIPWAKVSAYIDKRSKTQVYNRYLRLKGNIYKSGSFDKEEDNVIIAAMKLYGRNTRKIVQCLPGRSIAQVSYRIGILVNAKTILWSLSEDSYLLKLIGDQLPDYEEISKHFIGKSHANVRRRYLLLTRWLRANPLKTLRDFPRQATSNPLSNLDTAMKRLRNSIENNPKIIRTNLIFRRPLSGIDRQILSYFKNLPDKNTIINQSARLPMMAADVCEVRAILQLLGANLNMSKVASLQSQAPEIANLAKCLLTESKTLDAPVKKTAIKTYSRKKVPDTASVDNLKTNKSVDIWKNDDKIIRYYLPPFNDTITALRSLSLFRYTKRQTLNMNFTIMPSSSCVSQNNMWTGRVAAMFFMTNLLATLHPYVKSKLFHEDQAQISSRTVTDDLLLNLNLNIYKETDKPYLVASRKNYYSRKNTYSLSKRASPNEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -