Pcon023618.1
Basic Information
- Insect
- Plectrocnemia conspersa
- Gene Symbol
- Mblk-1
- Assembly
- GCA_009617715.1
- Location
- VTFK01000020.1:675362-690213[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2e-15 4.4e-12 45.9 0.1 2 39 382 420 381 425 0.93 2 3 1e-18 2e-15 56.6 0.0 1 43 808 851 808 853 0.95 3 3 3.7 7.4e+03 -2.8 0.1 3 13 1046 1056 1045 1057 0.89
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACTCTACCAGGACGTGCTATTAGCCAGAAATCTCCCGTTGCAGCAGCCCGACGACAACGAACCTCTTTCGGACTCATCGCCGCCAGAGGAAGACGACCACACCCACATGATAGCGACCACGGAGGCTGTCCAGCGGCACACTCCAGCCGTCGACCTGGTCACCGACCAGCAAGACCAGTGTCAAAAGTCGGAGCAATACAAGTCCTCGGACAGCGACATCAGGGTCGGCTCGCCGATAGTGCTCGACGAGGAAGAGGCCAAAGCAGATGTCAAGGAAGACGGAAGCAGCCCGGCGCCCAAGGACGAGAACCAGTCGTCGAGTGTCGGCGTGCAGAGTGTGTTGAAAATAAAGACAATCGAGCAGATCAACACGACGACAGGTGTTGATGCGGGTCTGAACCCTAAAGACGGTGGTGGTAGTGAAGCTAGTGAAACTATTTTAGAGGGCTTAATCAAGCGCACCAGCTCGGGCCCACCGCGCAGACCCTTGCCGGTGGACTGGACTCCGCAGGACAAATGCTACTTCTGCGTGGATGGTGAGCTGGTGAGGCCTGGAGCAACCAACGCTCCAGAGCCAGCTCCTGAGCAAGCTGCGAGTCCAGTTGAATCCGAATCGGAGTCTAGTTCCAGCAGATCCGGAACTAGCCCACCTAGGAATCAATTTTTGCTCAATCAGCAAGCTCAAGCTTTGGCTCAACTGTTCCTTCAACAGCAGGCCAGACTCAACCCATCGATGAATCAGGTGCAGTCAATGACGGCGTCCTTAGCGGCCATAGCCGCGTTGGGCGGAGGCACCAACCTACCCTCGGCCCTGGCGCTCTGCCCTCCGGCCCTCTTGCCACATTGGTACCTCAACGCTAGGGTGAACACGCCAGAACGGGGACCGGTGGACAACGACAAGTCAACAGTGACCGGCAACCTGTCGTCACCCTTGACCACCGAGCAGCCCTTGGACCTCAGCTCCAAGGCTTCAGCGCCCAACTCCAGCGAGGACCTCAAACCACCTCATGGAGAGGGATCCTCGTCGACGCTCGAGTCCAGATTGGCCAATCTGAGAGTACCGCCACAGCTATTCAAGTCAAAGCCTCGGATAGTGCCACCGACTGGAAGGAGGGCGTATTCTGAAGCTGAATTACAGGCGGCTCTTAGAGATATTCAATCTGGAAAACTAGGAACACGCAGAGCGGCCGTTCTATATAACATTCCCAGATCTACACTTAGAAACAAGGTGTATAAACTAGAGAGAGAAAGGGAATCTCGATTGCCTGGATCGCTTCCATCGTCGATTGACAGAGATGATTCCAATGATATTGGAGATGAGCTCGATGATGATAAAGACTCTTTGATGGACGATGATAAGGAAGAAGATAGAGAGATGAATCGACCCCTTCTCTCGATGGAAGATATTCTACGCTTCTCTCAAATGGACAATACTACTGAGAACCTACAGAAGCTGCTTCAGAAAGGCGGTCAGAAGTTCTTCGATATGGAGAGTCCTAAGAGAGACGCTGTTCCGGATTTGTGGTCCTGCATGGATCCAAGTACTATGACTCCTTATATTCAATCGTTTTTGATGGCCAACGCTCTCGGAAAACCCGAAGAGAGTACGTTACCGATGCCAGAAATAGCCAGATTGCTCGCCGAGGAACAACGCAATATCCTCAAAGAGCAGCTACTTAAACACGATCACCTCAACAACGGCAAACCTTCTGAGCAATCTGAAGACGATACGCTCAATAAGAGATTGTTTTCTAGACAGAGCTCTTCGGCTAGCTCGGTTATAACTAAGAATGAAAGATCCACTCCTGGCAGAAAAACCGATTCGCCGGAAGAGCCCATGGAGATCGTAGATCAAGATGGTTGCGGGGAATCTAGAGACTCGCCTTCCAACGTTATCCTCAAAATTCCGTCCTTCAAACCGCTGGCGACGACGCCCAACTCGAACAAAAATGGAGGAGAAGCTTTTTCTGGACCGGCTACGCCTCCGCATCCGTATTTCAGCCACAGCCCTCATCCAGATCAGAGCTCTACGCCGCGCGCCTCCGATCACTTATCTCCGCCTTTAGTGCATGTTAAAGGGCAGTCGTTCTCTATCAAAGACGTCATAGCCAAAAGCATCAGCCAAAAGTTCCAGCAGCACGTTCCGCCCACGAACCACAATGACCTGAATCAAATGTCTAAGCTCGCCGCTCAGAACGCGGAAGCAATGGAGAGCTTGAACGCGTACAAAAGAGGAGGACTCACGCCTCCCATGGGAAGCCAGAACATATCCGTGATCAAGAACTTAGCGAGTCACGACCTCACTAGAAACTTCAGCAACTCTTCGTCGAATCAAAGCCAACAGAACAACGCGACGGGCGGAAAAGGCACGAGACCTAAGCGAGGGAAGTACAGAAACTACGACAGAGACAGTCTGGTGGAAGCAGTCAAGGCAGTACAAAGAGGAGAGATGTCGGTGCATCGCGCTGGGAGCTATTATGGAGTTCCGCATTCCACGCTAGAGTACAAAGTCAAAGAAAGACACTTGATGAGACCGAGAAAGCGCGAGCCTAAAAATCCAAATCCAGACGATAAACTATCGACTTCTTCGCTGACGAGCAAACCGTCGGAGATACCCGGGAGTGGAATATTGAGAGTCGATAAACCGAAACTAGTTCAGAAACCTCCGACAAAACCGACGTTTCCGACTAGTTCGCCTAATGGCTTGAAGATGCCGACTATGTTCGATCCTGCGTTGGCTTTGGGATATAATCCGGGACCTTTTCCATTCTGGCCGCATGCTCCGGCGTTCGCTGGATTGCCAGTCGATTTTCCACCTAGGAATCCGGGGACATCGGGGTCTTTTCAGCCCGAGTCGTTTTTCGCATCTCAGATGATGCAAAGACTGCAAGAAGAATCTTCGAGACATCCGAACGTCGGGTCGCAAAAGACGCCTAATTCTTTGCTGAAATCCGCGAGGGACGTGGCTGAGTTTTACGAGGGAGCCGGCGGTGCGAATGGATCTTTTTTGGAAGGAATCATAAGGACGACTCTAGATCAGAACAATCAAAGATCGAGGGCAGTTGACGATCAAGACGGGAATCGCAGACTGCGGCCAGACGACATGATGCTGGCGGAAGAGATGCGGGAAGCCGTTAGGAAAGTCAGAGCGACCAGAGATCCCACCCCAGCTGCTACCTCCTCGACTCCGACACCTGAGGCTGCGGGCAGTCCGTCGCCGCACCCCACTTAG
- Protein Sequence
- MGRRKWKLYQDVLLARNLPLQQPDDNEPLSDSSPPEEDDHTHMIATTEAVQRHTPAVDLVTDQQDQCQKSEQYKSSDSDIRVGSPIVLDEEEAKADVKEDGSSPAPKDENQSSSVGVQSVLKIKTIEQINTTTGVDAGLNPKDGGGSEASETILEGLIKRTSSGPPRRPLPVDWTPQDKCYFCVDGELVRPGATNAPEPAPEQAASPVESESESSSSRSGTSPPRNQFLLNQQAQALAQLFLQQQARLNPSMNQVQSMTASLAAIAALGGGTNLPSALALCPPALLPHWYLNARVNTPERGPVDNDKSTVTGNLSSPLTTEQPLDLSSKASAPNSSEDLKPPHGEGSSSTLESRLANLRVPPQLFKSKPRIVPPTGRRAYSEAELQAALRDIQSGKLGTRRAAVLYNIPRSTLRNKVYKLERERESRLPGSLPSSIDRDDSNDIGDELDDDKDSLMDDDKEEDREMNRPLLSMEDILRFSQMDNTTENLQKLLQKGGQKFFDMESPKRDAVPDLWSCMDPSTMTPYIQSFLMANALGKPEESTLPMPEIARLLAEEQRNILKEQLLKHDHLNNGKPSEQSEDDTLNKRLFSRQSSSASSVITKNERSTPGRKTDSPEEPMEIVDQDGCGESRDSPSNVILKIPSFKPLATTPNSNKNGGEAFSGPATPPHPYFSHSPHPDQSSTPRASDHLSPPLVHVKGQSFSIKDVIAKSISQKFQQHVPPTNHNDLNQMSKLAAQNAEAMESLNAYKRGGLTPPMGSQNISVIKNLASHDLTRNFSNSSSNQSQQNNATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKNPNPDDKLSTSSLTSKPSEIPGSGILRVDKPKLVQKPPTKPTFPTSSPNGLKMPTMFDPALALGYNPGPFPFWPHAPAFAGLPVDFPPRNPGTSGSFQPESFFASQMMQRLQEESSRHPNVGSQKTPNSLLKSARDVAEFYEGAGGANGSFLEGIIRTTLDQNNQRSRAVDDQDGNRRLRPDDMMLAEEMREAVRKVRATRDPTPAATSSTPTPEAAGSPSPHPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -