Parg008798.1
Basic Information
- Insect
- Plebejus argus
- Gene Symbol
- -
- Assembly
- GCA_905404155.1
- Location
- FR989926.1:10855935-10879007[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.7 53 5.0 0.4 1 23 574 597 574 597 0.79 2 12 5.5 4.2e+02 2.2 0.5 5 20 663 678 661 680 0.91 3 12 0.00097 0.073 14.0 1.2 1 23 694 717 694 717 0.96 4 12 0.067 5.1 8.2 0.4 2 20 755 773 754 775 0.92 5 12 0.11 8.2 7.5 0.9 1 23 1442 1464 1442 1464 0.97 6 12 3.7 2.8e+02 2.7 0.7 2 23 1470 1491 1469 1491 0.94 7 12 1.3 1e+02 4.1 3.4 3 23 1583 1603 1583 1603 0.95 8 12 0.12 9.1 7.4 0.3 2 23 1619 1640 1618 1640 0.96 9 12 4.4e-07 3.3e-05 24.5 1.3 1 23 1646 1668 1646 1668 0.99 10 12 2.4e-05 0.0018 19.0 1.4 1 23 1673 1695 1673 1695 0.97 11 12 1.8 1.4e+02 3.7 0.2 1 19 1731 1749 1731 1750 0.77 12 12 0.047 3.5 8.7 1.2 3 23 1763 1784 1762 1784 0.97
Sequence Information
- Coding Sequence
- ATGCGAAGTCAAAGTCACTCACAAGTTACGTCTTTTACTCGCATCGTGGCGCTGCTGTCTAATTACGACGCCCTCTATAGTTTCTGCACGGTCCCTATAGGGATGTTAAACTTCGCGACCTTTGTCGTACCCAGGGGCAAGTTACACCTTCGAGCGTTACTCAGGTTCCTCAAACCGTTACTACACGCACCGGCCAGACGAATGGTGCACATTCCAAGCGAAGTGTCATCAGAACTAAGATGGTGGTTTCAGGAATGTCATCGCACGACTGCAATTCATTTTCCACCACCAACCCACTTCGTGACAACAGATGCCTCCGACGTAGCATGGGGTGCGCAAGTAGACAACCAGTCGTTGTCAGGAAACTGGAGCGTTGCAGAACAACATCTTCACTGCAATATAAAAGAAATGCTGGCGATTTTAAAGGTTCTCGAGAGTCACGGTCAATCATTAGCTCAAACAACAACACTCTTCCAGTGCGACAACAAAACAGTCGTAGCTTATCTGCGAAACGAGGGGGGGATGAAATCATTCCCACTAATGTCGACGACTTACAGAGTGTTCGAGCTTCTGGATCGCTATCAAATAAATCTGACAGCTCAATACCTTCCCGGCATATTCAACAGCACGGCCGATCACCTATCGCGACACAAGATGCCATCGGAGTGGCATCTGATACAGACATGCACAGAGAAAATTTTCACCAAATTCGGGACACCGGTAATAGACCTACTAGCATCGAGTCGGGCTCACGTGGTCTCCAATTACGTATCTCTGGACCTGACCTGGTCTTCGACTCCTTACACAGTAATTTCTGCCTGGTGCTTTCGACCTCAATGGCGGATGGCGCCGAGCCTGCAATCTCGCGCCCTGCTGGTGTTGGGAGGGGAATTGGAAAGGGATAGAAGATATAGCGTTAGAAAGAGATGGAAGAATAACCGGAAAACAGACGAGGCCTCTCTCAAAGCATCTAAAATGAGTCGAAGAAAGGATGTTCACATACCGAAAGTGTGGGAAGCTGAAGAGATATCCGACGACGATGACGAAGATATTGAGGAAATGCAGAAAGAGGTGGAGGATATTTTGAGTAGGATAACTAGCAAAAAGAAAACTACTCAAGTGAGTCAAGACACACCTGTACAATTTGACATCAAAATTGAAGTTGAAGAGTTTGATGACAAACCAAGTACAGGAGGTCAGAGTCACAACAAGAATCCTTCAGGATCAACATCGCAAAAGCATGGTACAACAAATACAACAAAACAGAATACCCAGAATGTAAACAAGATTCAAACAACTAACAAACAACCTCAACAGTCACTTTTGATCCAGAAATCTTCAGGATCAAGTCGGAACCCTCCAGTCTCAAAGAGTAAAGATAGTCTTTGCCAAAAATCTATATCACCAAGTCCTAAACCAAATACATATAAAAACAAAAATAACCCAACAAATTCACAATCTATTGAACAGAACAAATCAACTAATCCAACTTTATATCAACATTTTGTTATCGACGTTCATAATATTCGGTCAATAATGCAAATCCTCTCCAAGTATGGAAATATTGCCGATAATTACATATACATCTTGATGAACAATTATGAGCACATACCAACAGTGACAGAGAGTACTCATGTACAGATAGGTCTTCAAAAGGTTCTCGAGGTATGGAATAACTGGTTTCTAAAGGATCCTCTAAACCGAGGGGCCCCCTTGCTCTACAAGTGTAAAGATTGCGGCTGGGCCTGGTGGCATCTGAATTCTTTTTTGGAACACATAAGAAACGTACACGAGCGTCAAAAGTGGAAACTGAGATTCGAGTTTGAAGCGACCAATGGGGAGTCCTACGTAGCCTTGAAAATTTCAAGTAAATTCAATAAATGTCTGCCAGCGGTGAGAATAGTGAATGCCCCATGCTGGAGGTGTGGCATGCTGCCCGGAGACAAGTATCGAAACTTCAACACGACCACCCTATCATATCACTGCCAGTGTGGGATCCAATTCATCACGTGCTACGAGTATCGCCTCCACCTGGACGTGTGCCCCACCGTCGCGCCCAAGGTCAAGAAACTAGTGAACTACAAGTGCTACTTGTGCTTCCTGAGGTTCGACACACCCGAGGAACTGCAGCGGCACAGGCAGCTGTCCCACTCCGTGCGTTCAGACCTGCCCGCGTCCTGGACGCCGATCAGGAAGTGCATTCACTGCTTCATGCCGCATTTCGACGGCATAAGTGACTGTCCCGCCGTGAAGAGAATTGTGCCCTGCGGGTTTTGTACGAAGACGTTCAGCACGAAAACGGTGATGCAACTGCATCAGAGCTTCTCCAAGGAGAACTACAAGTGTAGGTTATGCGATGAAATCCTGACGAGGGAGTGTATGGAAATGCTGCACCTGGTGAAGCACACCAACAACTATATAGTGCTATTTAAGTGTGTGATTTGCGATAACAATAATACATACTTCCATAATGATACGGCTTACAATTTACATATGCTGAGTAAACACCCATGTAGAGACCAACCCGCCATGAAGGTTCCAGTGCCAGTGAAATGCCTTCAAGATTCGGGGTACAATCTGCAAACTCCTGAGACGGATAACATTATTGTGCCGCCACCACCGTCGTCCCACACCTTTGATGTGCCAGTGACAATACAAGGTAATAAATCTGTCTTGAAAAGAAAGGCCGGTCACAAAGAATCTCCGCGTAAGAGAGTGCGAAAAACAAAAAATAGCAGTCACGAAAAAGTTAATAATATGGATGTCTCAGAAATAAAAGTTGAAGAAGATATTGAGGATTTTATTAACACTGAAATGGAAATAAATGAAATGATTTTGTTTAACAATAAAGAGAGTGAAGTGCTTAAAATAAAATTAGAAGAATTTGAAGGAGATCTATCAGAAGGAAATAAATTAAATGATCCAAATAATGAGGGTAGTTCAAATATTCATTCCAATAAAAATAACTCAAATACTGCAAATGGTTTAAAAGATAAAAGTTTCCAGCCATTTGATGATGAAATTAATGAAACCGAAGGTTGTGAAAAAGTCTTGGAAATGAGAAAAGAAAATACTGAAGATGATGCTTTGAAAAAGGGAGAAGAATTGAATATTGCAGGTACTCAAAATGGTTCAGACATAAATTCAAATAAAAATAAGCCAACCGCATGTAACAGCAGTAAAAAAGAAAATTGTGATAGTAGTAGAATAAGCCTTACAAATAATGATGATAAAGTGATAAAAAATAATAATGATAAACTAAATGAAACTGCTAATTGTATTAAATCTGTCAAAGAAAATATTATTTTAGAAATGAGGAATGAAGCAGCTACACCTACAAGTAACGAAACGCTAGATTTTGAATTACAAATTCAAAAAACCATAATACATGCAAACGCAGCATGCAATGACCCTAGCCATGTGATAACTAATGTCATCGTCAAACACAAAACAGATGACAACTACAAAACAAAAGAAAATAATACATCAAGTAAACCAATACACACTCATGATCCTCACAAAGAAAAAGTTTTGAATTCTAATACCGAAGAAAAGGAGTTACAAAATTCAAATGTTGAAAAACGATCAGACAACAAAGAGGATAGTGTCCCACAAAGTAAGTGTGTAGTAAACCAAAAAGAATTAAACGTTGATACCAATAAAGATACTGAAGAGGGTGAAAAGAACAAAAACATCACTACAACAAAGGTTTTGGATAAACAAGAAATTAATAGCAGCAAAAATATTGATTCGCATGAGAAAGACATCCCTATCGAAACTAGTATCAATCTTAATGAACCTGATAAAGAAACACTCGACAGCAAACTAGTTGATAACCCTGGTCCAAGTAAAACGATAAAAGTAGAGCAAGATAGTATAATAGGGAATAGTAACGTTAAAATAAAAGAAGAAGTATTAGACGATGACACGGATGATGAAAAATTAGTTATAGCAGAATTCACCGACCTAATCACTGATAAATCTGTTACGTTAGAAGTGAAAGCGGAGCCGCAAGAGATTTTTGAAAACGACATCGATTTGGCGAAGAATAATACTGATAACAAGGATGTCGACGTAGACGATGATCGAGAGAATTCTGGTGAATACATAACTTGGACTCCTCATTTGGGTGTTGTCAGAGGTGGCGTGGATATGGAAGATGACGATGATGATTTGCCCCTTATGGATATCAAGAGGAAGAAGATGTACGCATGCAAGCGGTGTAAATTCAATGGGCTTCACGTGGAATACCAGAAACACAAAAAAATGTGTGTCCGACAAAAGAAATACAAGAAGAGGTTCTACCCGGAGGATTGTCGCAGCTACAATTGCATGATATGTGAGAAACAGTTTGGGACCATGATCAAATACTTGAAGCATCTCACCATGCACGGATACAACTGGCTGCAGTGTCCTGAGTGCATGGACAAGTTTCCCACCAAGGCCAGACTGTCGCAACACGTTTTACACCACATCAACAAGAACTATGTGCCGCTCCGGGGCATCACGTCAGCGAAAGACTATGGGTTTACGATGCAGTGCACCCAGTGTGACGATGAGGTGCAGCCGCACGAGTTCTTCAGTCACTGGGAGTGGCACCTGGCGTCGGCGCGGAGGCTGCAGACGAAGCCCCCGCTCGCCATAGACGATTGTGCACCACATTCGCCCATACTGAGAGATCTGATAGCGATACTTCTAGACCGCTACACCATCACAGACGACGATGAGCACAAACCGCTGCGGTGGTGCAAGATGTGCAACCGGCCGTTCACGCGGGACAACGAGTGTAAGCGGCACTACATTGAACACCTGCTCGAGGACGCCTTTTCGCACATGACTTACACCCAGGGGTTAAAGTGTCAGATCTGCGGGGAGGTGTGGGATAAGTGTGGCGATTTCCGTCTCCACATCCGCGCGCACGCGTCGATGCCGGTGTACCGGTGCGAGCTGTGCGGCAAGAACTTCAGCGACTCCAGCAACTTCGCCAAGCACCGCAAAGTCCACAACCTGTGCGCCTTCACCTGTGACATGTGCGGGAAGAAGTTCAATAGGAAGCTATCGCTCATCGAACATATCAAGTTCCACGAGAAAACGAAGCCGATAAGTTGCGAGTTCGAGGGGTGCTGCAAACTGTCGCACTCGCAGAGCGCTTACAACAAGCACGTGAAGCTCGTGCACCACCGCTCCAAGTACCGCTGCCAGATATGCAAGAAAGTACTTGGCAGCACCAAGGAAATATGGGACCATAAGTGGCAGGAACACAGGTTGCGGAAGGTGATAGCGGACTGTCCAATATGCCATATGCAGTTCCGTAAATACTTGGACGTGAAGACGCACGTTCGGAGCGAGCACGCTGATTGCTCAATCGATCTTAAGCGGCTCAACAAACTCGCGCCCGAGGAGAAGATCGGCAACGTCGCACGTCTCGTACACGATGTCATACTAGATCCAGAGCCAGAAGAAGACATTATAAAGATAGAGATAGAAGATTTAAGGTAG
- Protein Sequence
- MRSQSHSQVTSFTRIVALLSNYDALYSFCTVPIGMLNFATFVVPRGKLHLRALLRFLKPLLHAPARRMVHIPSEVSSELRWWFQECHRTTAIHFPPPTHFVTTDASDVAWGAQVDNQSLSGNWSVAEQHLHCNIKEMLAILKVLESHGQSLAQTTTLFQCDNKTVVAYLRNEGGMKSFPLMSTTYRVFELLDRYQINLTAQYLPGIFNSTADHLSRHKMPSEWHLIQTCTEKIFTKFGTPVIDLLASSRAHVVSNYVSLDLTWSSTPYTVISAWCFRPQWRMAPSLQSRALLVLGGELERDRRYSVRKRWKNNRKTDEASLKASKMSRRKDVHIPKVWEAEEISDDDDEDIEEMQKEVEDILSRITSKKKTTQVSQDTPVQFDIKIEVEEFDDKPSTGGQSHNKNPSGSTSQKHGTTNTTKQNTQNVNKIQTTNKQPQQSLLIQKSSGSSRNPPVSKSKDSLCQKSISPSPKPNTYKNKNNPTNSQSIEQNKSTNPTLYQHFVIDVHNIRSIMQILSKYGNIADNYIYILMNNYEHIPTVTESTHVQIGLQKVLEVWNNWFLKDPLNRGAPLLYKCKDCGWAWWHLNSFLEHIRNVHERQKWKLRFEFEATNGESYVALKISSKFNKCLPAVRIVNAPCWRCGMLPGDKYRNFNTTTLSYHCQCGIQFITCYEYRLHLDVCPTVAPKVKKLVNYKCYLCFLRFDTPEELQRHRQLSHSVRSDLPASWTPIRKCIHCFMPHFDGISDCPAVKRIVPCGFCTKTFSTKTVMQLHQSFSKENYKCRLCDEILTRECMEMLHLVKHTNNYIVLFKCVICDNNNTYFHNDTAYNLHMLSKHPCRDQPAMKVPVPVKCLQDSGYNLQTPETDNIIVPPPPSSHTFDVPVTIQGNKSVLKRKAGHKESPRKRVRKTKNSSHEKVNNMDVSEIKVEEDIEDFINTEMEINEMILFNNKESEVLKIKLEEFEGDLSEGNKLNDPNNEGSSNIHSNKNNSNTANGLKDKSFQPFDDEINETEGCEKVLEMRKENTEDDALKKGEELNIAGTQNGSDINSNKNKPTACNSSKKENCDSSRISLTNNDDKVIKNNNDKLNETANCIKSVKENIILEMRNEAATPTSNETLDFELQIQKTIIHANAACNDPSHVITNVIVKHKTDDNYKTKENNTSSKPIHTHDPHKEKVLNSNTEEKELQNSNVEKRSDNKEDSVPQSKCVVNQKELNVDTNKDTEEGEKNKNITTTKVLDKQEINSSKNIDSHEKDIPIETSINLNEPDKETLDSKLVDNPGPSKTIKVEQDSIIGNSNVKIKEEVLDDDTDDEKLVIAEFTDLITDKSVTLEVKAEPQEIFENDIDLAKNNTDNKDVDVDDDRENSGEYITWTPHLGVVRGGVDMEDDDDDLPLMDIKRKKMYACKRCKFNGLHVEYQKHKKMCVRQKKYKKRFYPEDCRSYNCMICEKQFGTMIKYLKHLTMHGYNWLQCPECMDKFPTKARLSQHVLHHINKNYVPLRGITSAKDYGFTMQCTQCDDEVQPHEFFSHWEWHLASARRLQTKPPLAIDDCAPHSPILRDLIAILLDRYTITDDDEHKPLRWCKMCNRPFTRDNECKRHYIEHLLEDAFSHMTYTQGLKCQICGEVWDKCGDFRLHIRAHASMPVYRCELCGKNFSDSSNFAKHRKVHNLCAFTCDMCGKKFNRKLSLIEHIKFHEKTKPISCEFEGCCKLSHSQSAYNKHVKLVHHRSKYRCQICKKVLGSTKEIWDHKWQEHRLRKVIADCPICHMQFRKYLDVKTHVRSEHADCSIDLKRLNKLAPEEKIGNVARLVHDVILDPEPEEDIIKIEIEDLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00404306;
- 90% Identity
- -
- 80% Identity
- -