Parg007682.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Plebejus argus
Gene Symbol
-
Assembly
GCA_905404155.1
Location
FR989948.1:698510-729703[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00035 0.026 15.4 0.4 1 23 537 559 537 559 0.97
2 11 3.3e-06 0.00025 21.7 1.7 1 23 573 595 573 595 0.99
3 11 0.00017 0.013 16.4 2.1 1 23 601 623 601 623 0.97
4 11 0.00024 0.018 15.9 2.4 1 23 630 652 630 652 0.99
5 11 1e-05 0.00078 20.2 0.2 1 23 658 680 658 680 0.93
6 11 4.5e-06 0.00034 21.3 0.1 1 23 686 708 686 708 0.97
7 11 2.2e-05 0.0017 19.1 2.4 1 23 714 737 714 737 0.96
8 11 0.00077 0.058 14.3 1.1 1 23 743 766 743 766 0.94
9 11 4.9e-05 0.0037 18.1 0.4 2 23 773 794 772 794 0.96
10 11 1.7e-05 0.0013 19.5 1.4 1 23 800 822 800 822 0.97
11 11 7.7e-05 0.0058 17.4 0.2 1 22 828 849 828 852 0.92

Sequence Information

Coding Sequence
ATGAATTGGACGGGACCATGTTTTATATGCAATCAAACTGCGTATGTTATGAAAGGAGGAGCAGAGATATTCAACAACAAGAAACCCCTAAAGTCGGAGAAGGAGCTACCGTCAGTGATCAGTGAGATAATAAAGAAGCCGGTGACCAAGGGTCTCACACACTCCACCTTGCTCTGCAGTAAATGCAACAAGATGGTCATGGAATATGATCTACTAGTTACAAGGTGTCAAAAGATCGAAATCGACGTTTTGGATTTGTTTAAAGTGACTCTGAAAAAATTGGAAATGGACTACGACAACTATGCCAGCACAGAAGTGTTAAAAGAAGAAACCGTTCAGGTCAAACCGATCGTTATAACTCGGGACAAACCGGAACCGAAGGTTGATCCAAAGATTGTGTTGTCTGCGTCTAAACTGCAGCCGTTGCCACCTAATTTTGTGCTACGGCCTAATATTATGCCGGACGTGAAGAAGAAAGTCGATCTACCTATTGTTACTAAGTTAAAGCCCGTAGATAAAGAAGAAATCGACACATCAGAAGACATGGCGGAGCAAAATGAGTTCTCATCGCTGCTCAGGTTTAACGAGACGAACCTACACAACTACTCCTTGAGTGCGTTCAGTGTGGACAGTGATGTTAAAGTGGAGAGCGATGACAATGGTGATGGTGATGGTGATGATAATCCCATGGAGATTGATGAAGCGTGCACGCTAACCGACAGCAACTTGGAGACAAGTATACTTCAGGGTATGGGGGAGGGGTTCGTGAGAATCGTACCAGCCGACGCCGGTGACACCGGTGATAACAGGAGTGATGATGATGAGGGCCACACAATAGTAATGGACGAGGACGGCTCCATAATCCGTGTTGTCTCTGGGCAGCGGTTCATGCTCGGTGACCAGGAGATATCGCTGCAGGTCATGCCCGATGGAGAGGCACTCGGAGACGGACAAGATTCTAACGACGAGTCGCAGATCGAGCTGCAGGTGTCTGGCGACGAGGAGACGGCGAACGCCATCATAGCGGCAGCTCAGGAGAAAGGCGGAGCGTGCCGGGACGGGTCGGCGCGGGTCGGCGCGCAACTCTCTGCCATGCTCTGCGCGACGAGTGACGGCGGGGCGATGCGGGGTGTGGCGGAAGCCGGGGCTTGCCGGGCCGCATCGCATCGTATCCGCGCGTCGCTTGCCGGGGCGCAGTGGGTCTTGTCGGGCCGTGTCGCAGTGACGGAAATCCGCCGAGCAAAAATCCGCGCCGATGCGCGCCGGCACAGTAGGCGATACGCCGCCATACAATTTGTATGGCGGCGGATTTATGCGATGAGCCCCGGCACGCTGAGCCCCGGCAAGGCCCGTCTCAGTGTGCTCAGTCCTTTATGGTACTGTCACTATGGCGGTGCGTTCATCAAAGTGGAGTCGGGTGAGATGTATCGAGTTGAGTCTGTGGAGAGTAAAGCCGACACCGAAGGCGCGGATATACAGGTGGAGAGGAAAGCTGAGGGATTGTTCAGGTGTAGATTTTGCGAGCGGTACATGAGTGCTGACAAAGTATTCGAGGGAGACGCCTCAGCCATGATGTCACATCTCAAGACGATACACGACGCGCGTCTATACATATGTACCGTGTGCGGGAAGATTATTCGACGGAAGTCGGAGTATGGGAAGCATTTGAGCAGTCACAGTGCGGGAGACGGCGACGTGCTGGACAGGGGCAAGGTGTATGAGTGTAACGAGTGTCACAAGAAATTCTCATCGCGAGTCCTACTGGCTGAGCACCTGAACACGCACGTGGGGGCGCGGCCCTACGTCTGCGGGGAGTGCGGGAAGGACTTCGCCAACAAGTACACCTACCAGGCACACTGCAAGACTCACACGAACCGCCCTCGTCCATACAAGTGTAACCAGTGCGAGAAGTCGTTCCTATCACAACAGAATCTGTCACAGCATGAGAAGACTCACTCCGGGATCAAGGACTTCATATGCAAGATTTGTGGCAAAGCCTTCGGCACTCAACATAATCTCGAAGTCCATGGCGTCGTCCACTCGCGCCGCAAGCCGTTCGCGTGTCGCGAGTGCGGGAAGGCGTTCGCGAGACGAGCGGAGTTGAGAGACCACGAGAGAATACATACAGGCGAGCGGCCATTCGAGTGCGAGATCTGTCACGCTCGCTTCACGCAACGGTCCAACCTCTATTCCCATCGCCGCGCCACACACACCGACGACAAGCGATATGCGTGCGACCGCTGCCCCAAGCGGTTCAAGCGCAAGCGACTCCTGGACTACCACGTCAAGGCGTCCCACACGGGCGAGCGGCCGCTCACGTGCGGCGTCTGCGGAGCCAAGTTCGTGTACCCGGAACACTACAAGAAGCATATGTTGATACACAGCGGCGCTAAACCGTTCCAGTGCGAAATCTGCGGCAAATCCTTCAACTCCCGCGACAACCGCAACATGCACCGCTTCGTGCACTCCGACCGCAAGGCGTACGAGTGTCTCGTCTGCGGCGCCAGCTTCATGCGCAAGAGCCTGCTGTACGCGCACATGAACCAGCGGGGTCACTTGGCAGAGTCCATAGTGATCAACCAACCGCGTATAGCGATACGAAGTGATTTTCAGAATTCTGAAGACAACTCGAACGCAGAAGGAACGGAAACGACATCGGAGCAATCAGAAGAAGTGGCTGATACAACCGAGAGTAACATTATAGGAGGAACAACTCTAAACATAGCTCAAGATGGAGGGACCACCATGTTAGCTATACACAACGCGGACGGAGAGCTGAAATCTGACGAGGGATTGCTGCAGACGTTCACAGTGGAACAGTTGGATCAGTCCATGCTATCTGACAACGTGCTAGTCTCTACGGAGGAACAACAAAGACCGGTGATGAGGCTGGTCCAACTTCAACTAAGAGACGGCAATACCAAGTGGGTGGCTGTGGATGGTTAA
Protein Sequence
MNWTGPCFICNQTAYVMKGGAEIFNNKKPLKSEKELPSVISEIIKKPVTKGLTHSTLLCSKCNKMVMEYDLLVTRCQKIEIDVLDLFKVTLKKLEMDYDNYASTEVLKEETVQVKPIVITRDKPEPKVDPKIVLSASKLQPLPPNFVLRPNIMPDVKKKVDLPIVTKLKPVDKEEIDTSEDMAEQNEFSSLLRFNETNLHNYSLSAFSVDSDVKVESDDNGDGDGDDNPMEIDEACTLTDSNLETSILQGMGEGFVRIVPADAGDTGDNRSDDDEGHTIVMDEDGSIIRVVSGQRFMLGDQEISLQVMPDGEALGDGQDSNDESQIELQVSGDEETANAIIAAAQEKGGACRDGSARVGAQLSAMLCATSDGGAMRGVAEAGACRAASHRIRASLAGAQWVLSGRVAVTEIRRAKIRADARRHSRRYAAIQFVWRRIYAMSPGTLSPGKARLSVLSPLWYCHYGGAFIKVESGEMYRVESVESKADTEGADIQVERKAEGLFRCRFCERYMSADKVFEGDASAMMSHLKTIHDARLYICTVCGKIIRRKSEYGKHLSSHSAGDGDVLDRGKVYECNECHKKFSSRVLLAEHLNTHVGARPYVCGECGKDFANKYTYQAHCKTHTNRPRPYKCNQCEKSFLSQQNLSQHEKTHSGIKDFICKICGKAFGTQHNLEVHGVVHSRRKPFACRECGKAFARRAELRDHERIHTGERPFECEICHARFTQRSNLYSHRRATHTDDKRYACDRCPKRFKRKRLLDYHVKASHTGERPLTCGVCGAKFVYPEHYKKHMLIHSGAKPFQCEICGKSFNSRDNRNMHRFVHSDRKAYECLVCGASFMRKSLLYAHMNQRGHLAESIVINQPRIAIRSDFQNSEDNSNAEGTETTSEQSEEVADTTESNIIGGTTLNIAQDGGTTMLAIHNADGELKSDEGLLQTFTVEQLDQSMLSDNVLVSTEEQQRPVMRLVQLQLRDGNTKWVAVDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-