Basic Information

Insect: Plebejus argus
Gene Symbol: -
Assembly: GCA_905404155.1
Location: FR989926.1:34790-39519[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00048 0.036 14.9 3.5 1 23 135 157 135 157 0.98

2 12 6.5e-07 4.9e-05 24.0 0.4 2 23 172 193 171 193 0.97

3 12 7e-07 5.3e-05 23.9 2.8 1 23 199 221 199 221 0.97

4 12 0.0021 0.16 12.9 0.4 1 19 227 245 227 247 0.94

5 12 0.00097 0.073 14.0 0.3 3 23 260 281 259 281 0.89

6 12 0.00056 0.042 14.7 1.1 2 23 343 365 342 365 0.96

7 12 1.3e-05 0.00098 19.9 0.2 1 23 370 392 370 392 0.99

8 12 1.7e-07 1.3e-05 25.8 3.1 1 23 398 420 398 420 0.98

9 12 0.00046 0.034 15.0 0.2 1 23 426 448 426 448 0.97

10 12 6.4e-06 0.00048 20.8 6.8 1 23 454 476 454 476 0.96

11 12 1.6e-05 0.0012 19.6 3.3 1 23 482 504 482 504 0.99

12 12 8.2e-06 0.00062 20.5 1.3 1 23 510 532 510 532 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00048	0.036	14.9	3.5	1	23	135	157	135	157	0.98
2	12	6.5e-07	4.9e-05	24.0	0.4	2	23	172	193	171	193	0.97
3	12	7e-07	5.3e-05	23.9	2.8	1	23	199	221	199	221	0.97
4	12	0.0021	0.16	12.9	0.4	1	19	227	245	227	247	0.94
5	12	0.00097	0.073	14.0	0.3	3	23	260	281	259	281	0.89
6	12	0.00056	0.042	14.7	1.1	2	23	343	365	342	365	0.96
7	12	1.3e-05	0.00098	19.9	0.2	1	23	370	392	370	392	0.99
8	12	1.7e-07	1.3e-05	25.8	3.1	1	23	398	420	398	420	0.98
9	12	0.00046	0.034	15.0	0.2	1	23	426	448	426	448	0.97
10	12	6.4e-06	0.00048	20.8	6.8	1	23	454	476	454	476	0.96
11	12	1.6e-05	0.0012	19.6	3.3	1	23	482	504	482	504	0.99
12	12	8.2e-06	0.00062	20.5	1.3	1	23	510	532	510	532	0.97

Sequence Information

Coding Sequence: ATGGGTCTAGTGAACTTGTCATGCTCCGCCACCGCGCATTTTACCGTGCCCAACCCCAACTCTAACAGTAACAGTATTGTGGAAGTTCTGGTCAAAAAGGAACCCTCGTACTCCGTAACCATAGAAGATCTGAAATTTAACATTGAAGATATGGAACATTATGATGACATGGACACCACGGAGGATTGGCACTCGGATGATGCTAAGGAGTATACCAAAAAGTTGAACTTTGGAAATGATGATATTAAACACATGGCATTTTTCAAAAATAAAGTAGAAATAGAAATAAATCCCCACAGTGCACACGAAGGAGGAATAAAAGAGGAAATCCTAGATCGAGAAATAAAAAAGGAAATCGTCGAGGACGACGGCCGCTTCGACCCTGCACTCAACACCGTCCTATACACCTGCCGCGTCTGCAACCACATGTTCAGCACAATGACCCTCCTCAACAAACACAAAGCCACCCACAGCGCTAGCAGATTGAAGGACACGTCGTCGACGAAAAAGGTGCCCTGCTCCATCTGCGGCAAGAGTTACGCAGACAAGAAGACCCTCAACAGGCACAAGAGGATCCACTCGGACGCCCGACCCTTCGCCTGCGAAGTCTGCGGGAAGGGCTTCACCCGGCGCGACCACTACAACAAGCACCGCCAGACCCACGCCGAGCCGCGCTGGTACTCCTGCACCGACTGCGGCGAGCGCTTCCCCTCCACCCCCGAGTTCGAGGCCCACGAGTGCCCCCCGACCCCCGCACCGCCCGCCACGCCCAGCGCCTGCGACGTGTGCGGCGAGACCTTCCCGCGCTGGGATCTCTATCACCAGCACAAGACCGACGTGCACGGAATCACGCTCTTCCCCGAGGTTACCATCGAGAGAGTCTCGCCCCCCACCCCGCCCGCCCCGCCCGCGGACATCGACAATCCCCCGGCCGAAGCCGAAGAAGGGAAACGGCGGGAGATCAAAAAACTAAAACCGCCCGTCGTGTTCGCCGCTTCGCGGCGCAAGAAGAGGAGGGACGAGCTGACGTGCGACAAGTGCAGGATCCGGTTCGCCAACAAGTACCGGCTGCAGAACCACGTGCTGACTCAGCACCGCGGCGTGAGCTACGAGTGCGACACGTGCGGCAAGGTGTTCCTGCGGCGCGCCAACCTCGGCCTGCACCTACGCACGCACACCGGCGAGCGCGGCTACTGCTGCGACGTGTGCGGCAAGACCTTCACCTACAAGAGCAGCCTCAACGTGCACCGGCGCGTGCATTCCGGCGACAAGCCGTACGCGTGCGAGCTGTGCGACAAGCGGTTCGCCGCGCACGGCCAGCTCGCCGAGCACAGGCTGGTGCACTCGGACGTGCGCGCGTTCGCCTGCGACGTCTGCGGGAAGTGCTTCAAGCGCCGCCGCCATCTCAAGAAGCACCTCACCTATCACTCCGGCGAGAAGCCCTACACCTGCGACGTGTGCTGCCGCAGCTTCACCCGCAACGACAACTACACCATACACATGCGCATACACACCGGCGAGAAACCCTTCGTCTGCGACGTCTGCGGCCTCACCTTCAGCGAAAACCGCCACCTTAAGAAACACAAAATCGTTCACGAGTGA
Protein Sequence: MGLVNLSCSATAHFTVPNPNSNSNSIVEVLVKKEPSYSVTIEDLKFNIEDMEHYDDMDTTEDWHSDDAKEYTKKLNFGNDDIKHMAFFKNKVEIEINPHSAHEGGIKEEILDREIKKEIVEDDGRFDPALNTVLYTCRVCNHMFSTMTLLNKHKATHSASRLKDTSSTKKVPCSICGKSYADKKTLNRHKRIHSDARPFACEVCGKGFTRRDHYNKHRQTHAEPRWYSCTDCGERFPSTPEFEAHECPPTPAPPATPSACDVCGETFPRWDLYHQHKTDVHGITLFPEVTIERVSPPTPPAPPADIDNPPAEAEEGKRREIKKLKPPVVFAASRRKKRRDELTCDKCRIRFANKYRLQNHVLTQHRGVSYECDTCGKVFLRRANLGLHLRTHTGERGYCCDVCGKTFTYKSSLNVHRRVHSGDKPYACELCDKRFAAHGQLAEHRLVHSDVRAFACDVCGKCFKRRRHLKKHLTYHSGEKPYTCDVCCRSFTRNDNYTIHMRIHTGEKPFVCDVCGLTFSENRHLKKHKIVHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00164577;
90% Identity: iTF_00164577;
80% Identity: -