Parg008038.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Plebejus argus
Gene Symbol
-
Assembly
GCA_905404155.1
Location
FR989948.1:7041721-7085848[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 37 0.075 5.6 8.0 4.6 1 23 206 228 206 228 0.97
2 37 1.6e-06 0.00012 22.7 1.6 1 23 234 256 234 256 0.98
3 37 0.00011 0.008 17.0 1.1 1 23 349 371 349 371 0.98
4 37 0.00052 0.039 14.8 6.1 3 23 379 399 377 399 0.98
5 37 0.0053 0.4 11.6 3.4 1 23 405 427 405 427 0.99
6 37 9.6e-05 0.0072 17.1 2.8 1 23 433 455 433 455 0.98
7 37 1.4e-06 0.00011 22.9 1.6 1 23 461 483 461 483 0.99
8 37 0.00027 0.02 15.7 0.3 1 23 489 511 489 511 0.97
9 37 8 6e+02 1.7 0.7 2 17 528 543 527 544 0.91
10 37 0.00032 0.024 15.5 1.5 1 22 758 779 758 779 0.95
11 37 6.4e-06 0.00048 20.8 1.8 1 23 814 836 814 836 0.99
12 37 1.4e-06 0.00011 22.9 4.6 1 23 842 864 842 864 0.97
13 37 2.2e-06 0.00017 22.3 3.4 1 23 870 892 870 892 0.99
14 37 0.00012 0.0091 16.8 0.7 1 23 898 920 898 920 0.97
15 37 0.0024 0.18 12.7 1.0 1 23 926 948 926 948 0.92
16 37 3.2e-05 0.0024 18.6 0.4 1 23 954 976 954 976 0.98
17 37 2.7e-05 0.002 18.9 2.5 1 23 982 1004 982 1004 0.97
18 37 0.65 49 5.1 0.7 1 13 1010 1022 1010 1023 0.92
19 37 0.00017 0.013 16.4 4.5 1 23 1211 1233 1211 1233 0.98
20 37 4e-06 0.0003 21.5 0.8 1 23 1239 1261 1239 1261 0.98
21 37 0.00023 0.017 15.9 5.1 1 23 1267 1289 1267 1289 0.98
22 37 0.00057 0.043 14.7 2.8 2 23 1296 1317 1295 1317 0.97
23 37 0.017 1.3 10.1 5.7 1 23 1323 1345 1323 1345 0.99
24 37 0.00019 0.014 16.2 3.1 1 23 1351 1373 1351 1373 0.98
25 37 0.00091 0.069 14.1 0.9 1 23 1379 1401 1379 1401 0.98
26 37 1.5e-06 0.00011 22.8 1.1 1 23 1407 1429 1407 1429 0.98
27 37 0.00084 0.064 14.2 2.8 1 23 1435 1457 1435 1457 0.99
28 37 0.0003 0.022 15.6 0.6 1 23 1463 1485 1463 1485 0.98
29 37 2.5 1.9e+02 3.3 1.7 3 14 1607 1618 1606 1619 0.92
30 37 0.00069 0.052 14.4 0.6 1 23 1622 1644 1622 1644 0.98
31 37 0.00023 0.017 15.9 1.0 1 23 1650 1672 1650 1672 0.95
32 37 7e-05 0.0053 17.6 4.3 1 23 1678 1700 1678 1700 0.97
33 37 0.00017 0.013 16.4 1.3 1 23 1712 1734 1712 1734 0.98
34 37 0.002 0.15 13.0 4.5 1 23 1740 1762 1740 1762 0.98
35 37 0.22 17 6.6 0.6 2 15 1893 1906 1892 1909 0.83
36 37 5.8e-05 0.0044 17.8 4.8 1 23 1914 1936 1914 1936 0.98
37 37 1.7e-05 0.0013 19.5 4.0 1 23 1942 1964 1942 1964 0.99

Sequence Information

Coding Sequence
ATGTCTAAAAGCACATCTTGCTCTATATGCCTATCTACAAATAGAAGAACTATTAACATTTATGCCACAAATCTCCAGTATGTTTATGAGGTTCTAGCCAACTTTAAGATCACAGATGTTGAGTGCTGGTTGTGCTACATCTGCCACACGAGACTGCGACAATGTCATCAGCTGCAGCAGTTGGCCGTGCAGACACGAGGTCTCGTTAAAAATCAAATCCAAAATAAGGTTGAGTATGGAGTCTTCAGATCGTACTTAAAGTTATCTATTTCTAGGACAAAAAATATATCAATAACAGAACCCTCTTTATATATCAAGCGGGAGTCAGATGTGAAGATAGAAGTTTGCAGTGAGAATGAAGTTGGTCTTATAGACAATGATGTGGAGAAAAAAACTTCCATCAAATCAGAATATGCACCAACTAAAAAGGTTCTAGAAATTACTTTCGAGAAGGATAATCCGAGTGAAACTGATGAATGTGACCAACATCCCACAACAAGCTCTGGACATGCAAAAATAAAACAAGAGGGAGCAGAAAATATAAGAGATGACGATGAGGACGAAAACGACACAGATCAGGCACAAGACGCCAGCAAAGCTGTGGTCAAGAAGCCTCACAAATGTGATGTCTGTTCTAAGAGGTTTTCATGCAAAAGCCTACTTCTCATACACTCTAGAGCACACACAGGCGAAAAACCATTTATCTGCGATGTTTGCCCCAAGAAATTCTCACAGAAGAGTCATTTGATCATCCACAAACGAATACACACAGAACTTCAAGTTGAGCTAGTAGAAAATGAAGTTGACAAAAAAACTTCCATCAAATCAGAATATGCACCGACAAAAAAGTTTCTAGAAATTACTTTCGAGAAGGTTAATCCGAGTGAAATTGATGAATTTGACCAATATCCCACAACAAGCTCAGAACACGCAAAAGTAAAACAAGAGAGAGCAGAAAATATAAGAAATGAAGGTGCTGATCAAGACAAACAAAACAACGTGAATCAGAGACAAGAAGCCAGCAAATCTGAGGCCAAGAAACCGCACAAATGTGATGTCTGCTCTAAGAGGTTTCCGATCAAAAGCCAACTTGTCGTTCACGCCAGAACACACACAGGCGAAAAACCATTTGGCTGCGATGTTTGCCATAAGTATTTCACGCATAAAAGTCATTTGATCGTCCACAAACGAATACACACAGGTCACAGACCGTATACATGTGAAATTTGCTCGAAGCAATTCCCTTACCATAATTCTTATGTACTTCACAAACGCACACACACTGGACACAAGCCCTATAGCTGTGCAGTGTGTCCAAAAAGTTTCACATGCAAGAGTCATTTGGACGCCCACATGCGTGTTCATACTGGACTCAAACCATACACCTGCAATGTGTGCTCAAAGAGCTTTGCGATAAAGGCACACTTGAATGTTCACATGCGTACTCACACTGGGGATAAACCATACTTCTGTGATATCTGCTCCAAGCAGTATGCTCAGTACGTGGATTTGCAGAGGCACCTACTCGTTCATTCGGAGACCAAAGCTTTCAGCTGCGAAATCACAGATGTCGAGTGCTGGATGTGCTACATCTGCCACACGAGACTGCGACAATGTCACCAGCTGCAGCAGTTGGCCGTGCAGACACGAGGTGTTACTGAAATTCTTAATATGGTTAAGGTTGGAGTGTATAGATCAGTCTTAGAGCTATCTTCATCTAGAACTATAATTATATCAACAGCAGAACCCTATTTATATGCAAAACAGAAGTCAGATGTGAAGAAAGAAGTTTGCAGCGATGACGAACTCGAAGCTGAATTCGAAAAAAAGGAAGTGGTGAATAAAACTAATATCAAATCAGAATATGAACCAACAGAAACGGTAGAAATTACTATCGAGAAGGTTAATCAGAGTGAAATTGATGAATATGACCAATATCCCACAACAAGCTCAGAGCACGCAAAAATAAAAGAAGAGAGGGCAGAAAATATACGAGATGAAGAACTGCAAGTTGAAATAGTAGACAATGTAGTAGAGAAAACAACATCTATCAAATCAGAATATGCACCAACAGAAGAGATAGAAATTACTTTCGAGAAGGTTAATCAGAGTGAAACTGATGAATATGACCAATATCCCACGACAAGCTCAGAACACGCAAGAGTAAAACAAGAGAGAGTTGAAATTATAAGAGATGAAGGTAAGGAACAAAGCAAACAAAACAACACCAATCAGACACAAGATGTCAGTAAAGCTGAGGCCAAGAAACCACACAAATGTGATGTCTGCTCTAAGAGGTTTCCGCACAAAAGCCTACTTATCATTCACTCCAGGACACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTACAGACCGTATACGTGTGACATTTGTTCAAAGCAATTCTCATATAGAAGTTCCTTGACCGTCCACAAGCGGATACACAATGGACACAAGCCGTACAGTTGTGCAATATGTCCAAAAAGTTTCACACGCAAGAGTCATTTGAATGCCCACATGTGTTTTCATACTGGACTCAAACCTTTTACCTGTGATGTGTGCTCAAAGAGCTTCTCACTGAAAAATCACTTGACCGTCCACATGCGTACCCATACTGGGGATAAACCATACTTTTGTGATATCTGCTCCAAGCAGTATACGCAGTATGTGGATTTGCAGCGGCACCTACTCGTTCATTCGGAGACCAAAGCTTTCAGCTGTGAAGTATGCTCGAAGAAATTTACACAGAAGAGATACTTAGACATACATAGTGTTGTACACACGGGCATAAAAAATTACACCTGTGACGTTTGTGCCAAGAAATTTGGAAGAAAAAGCGAGTTGAATGCCCACAATCGTATCCACACGGGCTACAAACCTCACACTTGTGATTTATGTTCAAAATCTTTTTCTCGTAAAAAAGATTTGAATAGCCATGTGCTGATTCATACTGGAGAGAAGCCATTTAGCTGTGATATATGCTTGAAAAAGTTCACACGTAGAGACGTTGAATGCTGGTTATGTTATATCTGTCACACCAGACTGCAACAATGTCACCAGCTGCAGCAGTTGGCTGTACAGACTCGAGGACTCATTGACGACATATTCCAGAATAAGATTGATATTAAGTTTGGTGCCTTTGGATCTTTGTTAGAGTTGTCGACAACAAACACGATGATAATGGACACAACATATTTAGAGACACCAGCACCAGATGTACCGATTCAATTTTGTGATGACAGAGGTGCAAACCCAGATCCCAATAACGTTACAGTAGGAAGCCATCCCACAATATCACGGGATCCCCTTTTCGACACAACAGCGGTATCAGATACCAGTCATGATGTTCAATCAAAGATACTGCTGGAAGTTAAAGTTGAGAACAACCATGATGATGATGAATATTCTCTACCAACATCATCACAATTTATAAGCAGTCAGGAGCATACAGTACAAGGAACAGTAAGCACTGAAACAATACAACATATAAAAAGGGAGATTGTCATTAAAAGTCGCGAACAAGTCAACAAGGGGCGAGGTCACGTCAGAAAAAAAAGGGAGAAACTGCACAGATGTGACGAATGTTATAGGATCTTTAGATTCAAGAGTCAACTATTTGATCACCTCAGGACACATAGAGGTGATAAACCGTTTTCCTGCGACATTTGTTCCAAAGCTTTCAAACGTATCAGCGATCTACAGAGACACTCAAGAGTCCACACCGGAGAGAGACCGTTTAGCTGCGAAGTATGTTTCAAATGCTTCAAATTCAAAACTGATTTGTACCGCCATATCAAGATACACAGCGTAGAAAAACCTTTAAGATGTGAGGTTTGTCCGAGGAAATTAAAAAATAAAGAGTGCTTAAACCGACATATGAAATTGCATCTCGGCACCCAGAAATACAGCTGCCACGTTTGTTCGAAGAGGTTTTTGTACGAAAGCGATGTGCATCGTCACATGAAAACTCACAGCGCGGAGAGGGAGTTCAGTTGCGATATGTGTACGAGATTATTCACAGAAAAACACAATCTAGATAGACATATGCGAATTCACCTGGGCGATCAACCGTACAGCTGCCAGATTTGTGCGAAGAAATTTTTATATGAGAGCGCCTTGCAACGGCATTTGAGGAGTCACACGCAAGTAAAAGAATACAGCTGTGATATTTGCTCGAGAATGTTTACGGAGAAACAGAATTTGGAGCGACACATGAGGCTGCATACTGGCGACCAACCGTATAGCTGTCATGTGTGTAACAAGAAATTCTTATATGACAGTGGTCTCCAACGTCATATCAACACGCACAAGCAAGAAAAACCTTTCAGCTGTGATGTTTGTTCGAGATTGTTCGCAGAAAAACAAACTCTAGAACGGCACATGAGGTTGCATATGGGTGACCAGCCGTACAGTTGGTCAAAACATGAGGCAGTAAATACTCAGTACGAATTGGAGGTAGAAGGCCTGTCAGTGGAATCTGAAGATCCCCTCATTGATACACAGCTACCAACAAACATAGTAGACGACTCCATGACATTAAAGCGAAGCCAGAACACCATTGAGGCATATACAAGTTCGATTTGCCCAGTCGATCAGTCAGCATATTTAGATGATAAGGAATGGGAGGCAGACATTAAATTGGAGGTGGAGGCGGTTGATGATCAAAGTACCGAACAAGACTACGAGCTAGACAACACAAGCCACGAGAGGCGGGACCACACCAGTGAAACACAGTCCAGCAAGAATCCGCATGGCTGTGATGTTTGTAACAAGAAATTCAAATTCAAAAGCGATAAACCGTTCGTCTGTCATGTTTGTGCGAAGAAATTTATAGAGAAGAGCGCTCTAGATAACCATGTGTTAACACACACCGGCACCAAACCGTTCAGCTGTAATATTTGTTCCAAACGATTCACGCTAAAGCTCAATTTGAAGAGACACGCAGTGGTCCATACGACGAAAACGCAGTTTAACTGTGATATATGTACCAAGAAGTTCCGTTTCAAGTCCACTTTGAAATCCCATAGACGGCTACACGGAGGCGCGAGAATAAAGGAACGCAACAAACCGTACAGTTGTGATGTGTGCTCGGAGAAGTTTTCCCACCAGAGATATTTGAACGCTCACGCTCAAATCCACGCGAGCGACAAAGTGTTTAGTTGTGAATTGTGTCCAAAAAAGTTCCTACGGAAGACTCATTTGAATAGACACTCTCGATCTCATACAGGCAGCGAAGAAGATGAAATTTTAGGAAACACTTTAAATCTTGAAGAAGAGGAGAAAACTTACGTAAAATCTGAAAACGAAGAATCAGCACAGGAAATACCAAATGTAAAAGCAGGATTTCAAAATTTTAAAGATCCTGGATTAAAAGTTGTGAAGATAAGTCAAGTAAAATCTGCCTCTCCAAATACAACACCCAACTTACGAGAACTCTTGGATAGAAAAAAACAGTCATTGGGTGCACAGAGCACGAAAAATGTAGAAATAAAAAAGATAAAAGATGAAACGGAAGATAAAGATACCGATCAAAATATCGGGCAAGAAAGCACAAGTAACCAGGAGCAAGAAAATGCAAATAGAGTGCGGACCGACCGGCACATGCGACCATTAAGTTGCGAAATATGTCACAAGAACTTCAAATACAATTACCAAATTCATACTGGTGATAAACCGTTCACCTGTGACGTGTGTTCAAAAAAATTCTCACACCAGTCTCATTTGATCGGCCACAAACGAATACATACGGGCGAGAAACCGTTTACCTGTGATATTTGCTCACAAAAATTCGCCCACAATTCTAGACTGAAGAGGCACATGCAAACTCATACAGACGGACGGCACGTGTCGGCGGCACGTGCCGGCGGCAGTCGACTACAGTCGGCGGCAGTCGACGGCAGCCGCTACTTTCTACTACATTCTACAAATACAGCTACATTCTTCACTACTTATCTAGATAAAGACCGCATAATACGCATTCTGCTTCTGCTACAGCAGCAGCAGCAGTTTAACAAGGCATGGTGA
Protein Sequence
MSKSTSCSICLSTNRRTINIYATNLQYVYEVLANFKITDVECWLCYICHTRLRQCHQLQQLAVQTRGLVKNQIQNKVEYGVFRSYLKLSISRTKNISITEPSLYIKRESDVKIEVCSENEVGLIDNDVEKKTSIKSEYAPTKKVLEITFEKDNPSETDECDQHPTTSSGHAKIKQEGAENIRDDDEDENDTDQAQDASKAVVKKPHKCDVCSKRFSCKSLLLIHSRAHTGEKPFICDVCPKKFSQKSHLIIHKRIHTELQVELVENEVDKKTSIKSEYAPTKKFLEITFEKVNPSEIDEFDQYPTTSSEHAKVKQERAENIRNEGADQDKQNNVNQRQEASKSEAKKPHKCDVCSKRFPIKSQLVVHARTHTGEKPFGCDVCHKYFTHKSHLIVHKRIHTGHRPYTCEICSKQFPYHNSYVLHKRTHTGHKPYSCAVCPKSFTCKSHLDAHMRVHTGLKPYTCNVCSKSFAIKAHLNVHMRTHTGDKPYFCDICSKQYAQYVDLQRHLLVHSETKAFSCEITDVECWMCYICHTRLRQCHQLQQLAVQTRGVTEILNMVKVGVYRSVLELSSSRTIIISTAEPYLYAKQKSDVKKEVCSDDELEAEFEKKEVVNKTNIKSEYEPTETVEITIEKVNQSEIDEYDQYPTTSSEHAKIKEERAENIRDEELQVEIVDNVVEKTTSIKSEYAPTEEIEITFEKVNQSETDEYDQYPTTSSEHARVKQERVEIIRDEGKEQSKQNNTNQTQDVSKAEAKKPHKCDVCSKRFPHKSLLIIHSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYRPYTCDICSKQFSYRSSLTVHKRIHNGHKPYSCAICPKSFTRKSHLNAHMCFHTGLKPFTCDVCSKSFSLKNHLTVHMRTHTGDKPYFCDICSKQYTQYVDLQRHLLVHSETKAFSCEVCSKKFTQKRYLDIHSVVHTGIKNYTCDVCAKKFGRKSELNAHNRIHTGYKPHTCDLCSKSFSRKKDLNSHVLIHTGEKPFSCDICLKKFTRRDVECWLCYICHTRLQQCHQLQQLAVQTRGLIDDIFQNKIDIKFGAFGSLLELSTTNTMIMDTTYLETPAPDVPIQFCDDRGANPDPNNVTVGSHPTISRDPLFDTTAVSDTSHDVQSKILLEVKVENNHDDDEYSLPTSSQFISSQEHTVQGTVSTETIQHIKREIVIKSREQVNKGRGHVRKKREKLHRCDECYRIFRFKSQLFDHLRTHRGDKPFSCDICSKAFKRISDLQRHSRVHTGERPFSCEVCFKCFKFKTDLYRHIKIHSVEKPLRCEVCPRKLKNKECLNRHMKLHLGTQKYSCHVCSKRFLYESDVHRHMKTHSAEREFSCDMCTRLFTEKHNLDRHMRIHLGDQPYSCQICAKKFLYESALQRHLRSHTQVKEYSCDICSRMFTEKQNLERHMRLHTGDQPYSCHVCNKKFLYDSGLQRHINTHKQEKPFSCDVCSRLFAEKQTLERHMRLHMGDQPYSWSKHEAVNTQYELEVEGLSVESEDPLIDTQLPTNIVDDSMTLKRSQNTIEAYTSSICPVDQSAYLDDKEWEADIKLEVEAVDDQSTEQDYELDNTSHERRDHTSETQSSKNPHGCDVCNKKFKFKSDKPFVCHVCAKKFIEKSALDNHVLTHTGTKPFSCNICSKRFTLKLNLKRHAVVHTTKTQFNCDICTKKFRFKSTLKSHRRLHGGARIKERNKPYSCDVCSEKFSHQRYLNAHAQIHASDKVFSCELCPKKFLRKTHLNRHSRSHTGSEEDEILGNTLNLEEEEKTYVKSENEESAQEIPNVKAGFQNFKDPGLKVVKISQVKSASPNTTPNLRELLDRKKQSLGAQSTKNVEIKKIKDETEDKDTDQNIGQESTSNQEQENANRVRTDRHMRPLSCEICHKNFKYNYQIHTGDKPFTCDVCSKKFSHQSHLIGHKRIHTGEKPFTCDICSQKFAHNSRLKRHMQTHTDGRHVSAARAGGSRLQSAAVDGSRYFLLHSTNTATFFTTYLDKDRIIRILLLLQQQQQFNKAW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-