Parg000074.1
Basic Information
- Insect
- Plebejus argus
- Gene Symbol
- -
- Assembly
- GCA_905404155.1
- Location
- FR989940.1:749835-756084[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.4e-09 1.8e-06 27.9 0.0 2 39 155 193 154 197 0.90 2 4 2.1e-12 1.6e-09 37.7 0.1 1 39 208 246 208 249 0.94 3 4 1.5e-14 1.2e-11 44.6 0.3 2 45 264 307 263 307 0.96 4 4 2e-16 1.6e-13 50.5 0.0 4 40 317 354 314 357 0.92
Sequence Information
- Coding Sequence
- ATGCCCGGCCACGATTTTAAATCGATTAAATGCGAGCCAACGACGGAAGATGATATTAGCCAGCATAATATCACTTTGGACATGACGTGGTATCACGCGGAGTCTAATCTGCAGCCAGTCGCCAGTCATTTGTTGCATCAGTTGCACGGTACCCTGGATGAGCTAGCACCAGCGCCAGCGGGGCCCGCTGCGACGCCGGTGGAGGAGCACCTCCCGTCACCGACGGAGGCGTCGTTAGCGACTCTCCAACCTGCACCTCTAGGAAACACCATGGGTAGTTCAATAATCGACATGCACTCAAAGATGATGAGCGCGACGGAGGTGGCCGACTCCGGGGACTTCGTGCCGCTCATGCCGGTCAAGGATGAGCTGTCCGAGAGTGAGCAGCAACAGAGCAGCGACGACACCAGCGACTCCGCCCCGGAGCAGGCGGTAGGCCGCGGGAGCCCCAAGGCGTGGTCGCCGCAGGACATGGACAGCGCGCTCGACGCGCTCAGGACACACAACATGACTCTCACTAAGGCATCAGCGACGTTCGGCATCCCGTCCACAACGCTATGGCAGCGCGCGCACCGCCTCGGCATAGACACGCCGAAGAAAGATGGCGCCTCCAAATCCTGGAGCGAGGATGACCTGAAGGCGGCGCTGGACGCGCTGCGAGCCGGCACCATCTCCGCCAACAAAGCTAGCAAAGCTTATGGCATCCCCAGCAGCACTCTGTACAAGATAGCTCGGCGCGAGGGCATCCGTCTGGCGGCGCCGTTCAACGCCGCGCCCACCGCGTGGCGGCGCGCCGACCTCGCGCGCGCGCTCGCCGCCGTGCGTGCGGGCGCCGCCGTGCAACGTGCCGCGTCGCACTATGGTATACCCACAGGGACTCTATACGGACGGTGCAAGCGAGAGGGTATAGAGCTGTCTCGCTCTAACCCGACGCCGTGGTCGGAAGTTGCTATGGAGGAGGCGTTGGAAGCTGTCAGGGTGGGTCAGATGTCGATCAACCAGGCGGCCATACACTTCAACCTGCCGTACTCGTCGCTGTATGGCCGCTTCAAGCGCTGCAAGATCCAGCCGCACCAGGGCATCCAACCTTCAAGTCACATGGAGTTCTCTGAACAGATGGGTCATCAGTTCTCTCCGGACATGATGTCCGGTTTGGATGACATACACCGGACATATACCCTGGCGGACGTCCTAGACGTACAGTCGTGCACACAAGAGTTAAACGATGAGTACACTGTACAGCCGCGAACACAAGCGGAACATAGCGTATCGTATGTACAGTCGCGATCACCAGACACATCTAGAAGGCAGGTCCAACAAGAGGTACAGTCAAACACTGACCTGCAAGCTGCACACGCACCTGTACAATCACGACCACAAGCGGATCTAGTATCGTATGTACAGACGCGAACACTCGAATCCATAGATAAGCGAGACGTTCGGCCAGAGTTTCAGTCGAGCGAAGGACGTCTACCAATAGCGCAGGCGCCTGTACAGTCGCGACCGCAAGTGCATTCACTAGTCAACTCGTACGTACAGCCGCGAACAATTCAGTCCACTGATAAGCGACAAGACCTACAGCGAGAGCTTCAGTCGAGCGAAGGGCGTCTACAAACTGCGTTTGTACACTCGCGACCACAAGTGCATTCACTAGTACAGTCGCGAACTATTCAGTCCATTGACAAGCGACACGACGAGCAGGTACAGTCGGGCGCAGAAGTGCGGGCGTTTAGCGGCGTGCGTCAAGCTCTGTACGCGCTTGAGCCGTGCGGCCCCGCCTACTGCGTCGCCAGCTGA
- Protein Sequence
- MPGHDFKSIKCEPTTEDDISQHNITLDMTWYHAESNLQPVASHLLHQLHGTLDELAPAPAGPAATPVEEHLPSPTEASLATLQPAPLGNTMGSSIIDMHSKMMSATEVADSGDFVPLMPVKDELSESEQQQSSDDTSDSAPEQAVGRGSPKAWSPQDMDSALDALRTHNMTLTKASATFGIPSTTLWQRAHRLGIDTPKKDGASKSWSEDDLKAALDALRAGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLARALAAVRAGAAVQRAASHYGIPTGTLYGRCKREGIELSRSNPTPWSEVAMEEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKIQPHQGIQPSSHMEFSEQMGHQFSPDMMSGLDDIHRTYTLADVLDVQSCTQELNDEYTVQPRTQAEHSVSYVQSRSPDTSRRQVQQEVQSNTDLQAAHAPVQSRPQADLVSYVQTRTLESIDKRDVRPEFQSSEGRLPIAQAPVQSRPQVHSLVNSYVQPRTIQSTDKRQDLQRELQSSEGRLQTAFVHSRPQVHSLVQSRTIQSIDKRHDEQVQSGAEVRAFSGVRQALYALEPCGPAYCVAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00164245;
- 90% Identity
- -
- 80% Identity
- -