Pcor001810.1
Basic Information
- Insect
- Platyscapa corneri
- Gene Symbol
- Zmiz1
- Assembly
- GCA_018907185.1
- Location
- JACCHW010000003.1:4774498-4781656[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.027 8.4e+02 1.6 0.7 5 24 314 333 310 339 0.90 2 2 3.5e-26 1.1e-21 78.1 4.3 1 50 393 442 393 442 0.98
Sequence Information
- Coding Sequence
- ATGACGGGAATGTCGCCCATGAATCCTATGAGCAACATGAACAACGTCGGAATGATGAACAGTGCAATGAACACGGCCGGAGTTCCCATAAGCAAGATGAGCATGCAGCAGCAGACGCAGCAAGCATATGCGAGGCGAATGGTTCCCTACCCGAACCCAGCGATGCACGTCACACAGAAAAGAATGCAGCAGGCCCAGCAGCAGCACGTTCCATACGGCGCGGGGGCCCCTGCAGCGGCGATGCCCCACGCTGGCTACGGGGGCATGAGCCCGGGTCCGCATCAGGCTAGTCAGTACTACGGGAGCCAAAACCCGACAGTCCCGACCGTCAATGTCAATGTCAATGTCATGCACCCGCACCACCACCAGCAGCAACAGCAGCCGGGAGTGGGTGTTCCACAGGGCAACCCCAACGCGATGGCGGCCACGGCCTACGGGGTCAGCGCCGGACAATACCAACAGGACAACTCCTCCATGAGGTCGGCTGCAGCGGTCCAGGGTACCGGCAACATGAGCTACCAACACAGTCCTATACCTGGCAATCCGACGCCGCCACTCACACCGGCCTCAAATATACCGCCTTATGTCAGTCCCAACGCGGACGGTAAGCACGGCTTCAACGACATCAAACCCATGATTCCAAAAGAGGAAGAATTGAGATTAACATTCCCCGTGAGAGACGGCATAATCCTCCCCCCTTTCCGTCTGGAGCACAACCTGGCTGTGAGCAACCACGTATTCCAACTGAAGCCCACCGTGCATCAAACATTAATGTGGCGGCCGGACCTCGAACTACAACTGAAATGCTTCAACCATCAGGACAGGCAAATGAGCACGAATTGGCCACTAAGTGTCCAAATATCGGTTAATGCGACGCCGCTCGTCATTGACAGGGGTGAGGACAAGTCGTCCCACAAGCCCCTCTATCTGAAGGACATCTGCCAAGCCGGTCGCAACACTATACAGATCACCGTGTCGGCCTGCTGCTGTTCGCACCTATTCGTCCTACAATTAGTCCACCGACCGAGCGTGCAGAGCGTATTGCAGGGGCTCTTGCGCAAGCGACTTCTCACCGCGGAGCATGGCGTAACCAAGATAAAGAGAAATTTCAACAATACCCTTCCCAGCAACGGGATCCCAACGGAAAAGGATGTCGTTGAGCAGACATCGATAAAGGTGTCGCTTAAATGTCCAATAACGTTCAAACGAATCACGCTACCGGCAAGGGGTCAGGATTGCAAACACATACAATGCTTCGACCTGGAATCATACTTGCAGCTCAATTGTGAGCGGGGAAACTGGAAGTGTCCAGTTTGCAGTAAACCAGCCCAACTGGAAGGTCTTGAGGTTGATCAGTACATGTGGGGTATTCTGAATAACACAAACTCGCCGGATGTAGAGGAAGTGACGATAGACTCTTCCGCCAACTGGAAGCCGAAGAAGTCGGAGGACGACACCGAATCGAACAACGTCAACTCCTCGAGCTTGGCCGGGGTTGGAATGGGCAACCCCGGGGAAATGTCGATGAGCGGCAATGGTGTACAAAACGATTACCCGGGAACGGGGCCACTCTCACACCTCAATGATCATACCAACTCATTGGATCATCTAAACGCCATTGATAAATCATTGGGTGATCAGATGCCCCACACGCCGCACACGCCACACACGCCGGGCGGCGGCGGAAATAGCGGCCCCCCGAGCGTTGCGCCCTCCGTATCCCAAGACACGAGCGGCAACAATCTCAACACGTCGACGGGCAGCGGTGTGCCGGGCGTCACGGACACCTCCGACATCATAGCCTCCGACTTGAACTTCGACCCCGCGGCCGTCATCGACGGCGACGCCGGCCAAGAGACGCTCAACCTATTGCCGGACAACGTAGTCGATCCAATGGAACTTCTCTCTTACTTGGATCCGCCAGACCTAAATACGCCGCCGAGCAGCGGCGCGAGCAGCGGAAATCCGCCATCGAACGACGACATACTTGCCCTGTTCGAATAA
- Protein Sequence
- MTGMSPMNPMSNMNNVGMMNSAMNTAGVPISKMSMQQQTQQAYARRMVPYPNPAMHVTQKRMQQAQQQHVPYGAGAPAAAMPHAGYGGMSPGPHQASQYYGSQNPTVPTVNVNVNVMHPHHHQQQQQPGVGVPQGNPNAMAATAYGVSAGQYQQDNSSMRSAAAVQGTGNMSYQHSPIPGNPTPPLTPASNIPPYVSPNADGKHGFNDIKPMIPKEEELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMWRPDLELQLKCFNHQDRQMSTNWPLSVQISVNATPLVIDRGEDKSSHKPLYLKDICQAGRNTIQITVSACCCSHLFVLQLVHRPSVQSVLQGLLRKRLLTAEHGVTKIKRNFNNTLPSNGIPTEKDVVEQTSIKVSLKCPITFKRITLPARGQDCKHIQCFDLESYLQLNCERGNWKCPVCSKPAQLEGLEVDQYMWGILNNTNSPDVEEVTIDSSANWKPKKSEDDTESNNVNSSSLAGVGMGNPGEMSMSGNGVQNDYPGTGPLSHLNDHTNSLDHLNAIDKSLGDQMPHTPHTPHTPGGGGNSGPPSVAPSVSQDTSGNNLNTSTGSGVPGVTDTSDIIASDLNFDPAAVIDGDAGQETLNLLPDNVVDPMELLSYLDPPDLNTPPSSGASSGNPPSNDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00464339;
- 90% Identity
- -
- 80% Identity
- -