Pcor021334.1
Basic Information
- Insect
- Platyscapa corneri
- Gene Symbol
- pnr
- Assembly
- GCA_018907185.1
- Location
- JACCHW010000100.1:431963-453251[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-18 6e-14 53.1 2.6 1 34 165 197 165 199 0.96 2 2 2.3e-19 2.4e-15 57.6 5.8 1 35 224 257 224 258 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGACAGGGAATAGCGGCTACGGCGCAAGTTCCGACTACCAGCAGCAAACGCAGCAAGCCCAGCCACTTCAGCAACATGCTCAGCAGGTACAAGCTCCTGTATACGTACCATCTTCTAGACCTACTATACCCTCTTCAACCACGGCAACTCAGTATCATTCATTTCCTGGCTCTGCTTCGCCGGGTTGGGAAAAGACTGCATCCTGGCAACACGGAGTGGATAGTTACGCTCATCACGCCTTGGTTACTCATACAGGGAATTCTACGGGTAGTATGGGTGCACATACTAGTCACACGCACCCACATCCAGGACACCCGCACACAGCTCATCCTCATACGAGCCTTGCCACAGCAGCAGCGACGCCTTTTTACGCACAAAATGTCGCGATGATGTCTTCATGGCGTGCTTACGACAGTGCTGGATTTCAGCGATCGTCTCCGTATGATACGGCTATGGATTTTCAGTTTAGTGAAGGGCGAGAGTGTGTTAATTGTGGAGCTATTTCTACTCCATTATGGAGGCGCGATGGCACTGGACACTATCTTTGCAATGCCTGCGGTCTTTATCACAAAATAAATGGCATGAACCGTCCTCTCATTAAACCCACAAAACGCTTGATTTCTGAATTCCAGACGGCAACGAGGCGACTGGGACTGTGCTGCACGAACTGTGGTACGCGAACAACAACCCTGTGGAGACGCAATAACGATGGTGAGCCCGTCTGCAACGCTTGTGGCCTTTATTTTAAGTTGCACGGAGTTAACCGACCGTTGGCTATGAGGAAAGATGGTATACAAACACGCAAACGAAAACCCAAGAAAACGCCTGAACCAAATGTACGTCAGTCTTCTATCGAGCATGGCAATAGTTCCACAGCTTCTTCACCATCTAATGAATTAAAAAGCAGTCATCACCACCAACATCAGCACCAACTTGACAGCAAAACATCATCGACAAATTCTACATCCTCGTCGTTGGAACGCCCAGTATATCTTGGACATACATCGCTTTTATCGTCTAGTGTAACTGGTAGTGACGAAGGTGGAGATAACAATATTACAACAGTGAAAACCGAGCCACGTAGTTGTGACAGTGGAGTCATAGGTCAACCCTACTCAACATACTACCAGCATCCACACCAACTCAGTGTTTCAACGAATGAACATCAGCAGGGTAACTACTATACTGCCCAGGAAGCACCATATCATCATCAGCATCACGTTACAGCGACTGCCAAATTGCTAGCTTCATCTTAA
- Protein Sequence
- MFHGTGNSGYGASSDYQQQTQQAQPLQQHAQQVQAPVYVPSSRPTIPSSTTATQYHSFPGSASPGWEKTASWQHGVDSYAHHALVTHTGNSTGSMGAHTSHTHPHPGHPHTAHPHTSLATAAATPFYAQNVAMMSSWRAYDSAGFQRSSPYDTAMDFQFSEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKINGMNRPLIKPTKRLISEFQTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNVRQSSIEHGNSSTASSPSNELKSSHHHQHQHQLDSKTSSTNSTSSSLERPVYLGHTSLLSSSVTGSDEGGDNNITTVKTEPRSCDSGVIGQPYSTYYQHPHQLSVSTNEHQQGNYYTAQEAPYHHQHHVTATAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00714056;
- 90% Identity
- -
- 80% Identity
- -