Pcor039704.1
Basic Information
- Insect
- Platyscapa corneri
- Gene Symbol
- ncor1
- Assembly
- GCA_018907185.1
- Location
- JACCHW010000021.1:604758-615235[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3 1.4e+04 -2.0 0.1 31 39 379 388 376 389 0.80 2 2 2e-08 6.7e-05 24.7 0.0 3 43 551 591 550 594 0.96
Sequence Information
- Coding Sequence
- ATGCGCGACGCAAGCTTTCGAGTCGTTTGCGTCCACGTTCTGGCGGACGGACGGACTCGGTGCCGCTACTATCAGCAGTCGCGTCGCTCGTTCCGATCGCACCGCAAGCCGCGCACCTCCGAGAATTGCAGACCGTCAGTGACGAGATCCAATCGACCGGCGGCAGCATTTGCCGAACTAAGCTTAAGCGCAACCTGGAACGCGAAGCGTTTAACGCCGGCAATGACTGGGTTTCAGGTCAACGAGCGAGTGGCGATCAGCGTCAGCAGCAGCCCCGTCTCCTCCCAGGTCGTCGGCGTCGGCAGCGAGTACGTGGTGAGCGGTCGCGGCGAGCGGCCCCGGATATCTCTGCTCCCGGCGCCGGCCTCGATCGCACCAGCAGCCTCGCCCACCGCCCCCACGGACTACCACGCCGCAGCGGCGCGCAACAATCGTGGCGGGGGCGGCGGGCCTGCCATCCTGGCGATGCAGCCGCAGGACTACCGACCGAGTCCCGTGGACATGGCCCAGATGCAGCAGGACGCCCCGCCCTTCAAGAAGATCCGACTCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATACGAGGCCGACGGCGGGTGTTTATACGCCACAAACGGAGGCCATTTCGCCGACCCTTCCAGAACCCAATACACAAGAAGATGCGGCATTTAGGAGTACCAAAGACGATCTCCTTCAGCAGATCGCCAAAGTCGATCGGGAAATTGCGAAAAGGGAGTCTCAGATTAGCAAACTTCGGAAGAAACTCAAGGAATTGGAAGAAGTTGCTAGTAAGCCCTTGGAAGCAACTGGTACTAAGCGGCCTGTCGAGGAGGCGTCTCTGCAACCCAAACATCAGTCGCTCGTACAAAAAATTTATGCTGAAAACAGGAAAAAAGCGGAGGAAGCGCACAGGCTGCTGGAGAAACTGGGCCCCAAGGTGAAACTGCCGCTCTACAATCAGCCTTCGGACACGAGCGTCTACCAGGAGAACCGCACCAGGCATCAGTGCATGAAGGCGCGCCTCGTGGCCAGACTGCGCAAGGAACACGCGGAGCGCGCCTCCCTGCACCGGCAGCAGTCCCAGACGTACGCGATACTCGTGCAGGAGTGGCACCGCAAGGTCGAGAAGCTGGAGGCGACGCAAAAGCGCAAGACCAAGGAGGCCAAGAACCGCGAATTCTTCGAGAAGGTCTTCCCCGAGCTGAGGAAACAGCGCGAAGACAAGGAACGCTTTAATAGGGTGGGGGCGCGTATTAAGAGTGAGGCCGATCTGGAAGAGATTATGGACGGTCTGCAGGAGCAGGAGGAAGAGTTGTCGACCGAGTTAAAAAATGCGTTGAAAACTCATCAGATGGAAGATAAGAAGATGCGCTCCTACGCCGTGATCCCGCCGCTGCTGCTGGACGCGAAGCAGAGGAAAATCGCATTTCAGAACCGCAACGGGCTGCTGCAGCCGGAGGAGCTCGAGGCCTTACACAGCGAGAGGAAGCTCATCAATGTCTGGAGCACGACGGAGCACGACATGTTTAAGGAGAAGTACCTCCAGCATCCCAAGAACTTCGGAGCGATAGCCCAATCGTTCGAGCACAAGTCCGTGGCGGACTGCGTGCATCACTACTACCTCACTAAGAAGGCGGAGAATTACAAGCAGCTACTGCGAAAGTCGAGGCGTACGCGTAGTTCTCGAAACAATCCTAACAATAAGGTAAATAATAGTAACTCCACTATCGGACCTATAGATATATTAACTACGGGAGTCACGACGAGGCTGCAGCGTGAGCAGCAACAGAAAACCCAAGAGAATCCTCAGAGTAGCTCGGCGTCGGCGAGTAGTGGTAGCAACGCGACGACGACGACCTCGACTCCATCGACGACCACTTCCTCGTCGACGTCGGTTACGAGCACAAGCTCCGTCTGCACGACGTCGTCCTCGTCCAGCACCGCCGTCACCGCGAGCTCGTCTGGCAGCAGCAGCGGCGGCGCCGCGAGTGCGGTTTTAACCTCGGAGTCCTCGCCAACGACGGTGATAACGACGGCGACAACCGCGACAACGATAACGTCAACGGCATCGGGAGCACCTGCAGCAGCAGCAGCAGCGTCCGCATCCGTCCCGAGTATCAGCGAGACGACAACGACGTCAAGCGTACTCACGACGACGTCCATGTCGTCGACCAGCGCCAAGGACGCCCGCGAAGCTAATAAGGAGAACAAGGAGATTAAGACAGATCAGAAAGACTCGCTACTGCTTAAGGATATCAAAGACGAATCGCAATCGAGTTCCGAGACACTTTCTAGCAGGGAAATCAAGGTCGAGGGCAAAGGTGCTCTGTCATCCTCGTCGAACACGAGCGCGACGAATGCCAACAATGCGAGTGGCAACCTTCAGCTCGAGCTGCAGCAGCAACAGCAGCAAAAGGACAAGAAGAAAAACGCTGGCTCGACGGGAGGCTCGACTGTCACTAGCAGGTCCAAGGACAAGAAAAAGGAGAACCACGCGACGCCCATGGAGACGAGTGACGAGGAGGCCCAAGCTATGGACGCAATGGTCAGGGGGGAGGGCGGGGGGAAGGCTTTGCGAGCGTGGGAGTACGTCTGCATCGGTGAAATGCTCGAGTACCGAGTAGTTGTGCGTCGCTCCGGTCTAACTACTGCTACGAAACTGGGTTGCTCAGTTTACGCTTTAAATAAATAA
- Protein Sequence
- MRDASFRVVCVHVLADGRTRCRYYQQSRRSFRSHRKPRTSENCRPSVTRSNRPAAAFAELSLSATWNAKRLTPAMTGFQVNERVAISVSSSPVSSQVVGVGSEYVVSGRGERPRISLLPAPASIAPAASPTAPTDYHAAAARNNRGGGGGPAILAMQPQDYRPSPVDMAQMQQDAPPFKKIRLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRPTAGVYTPQTEAISPTLPEPNTQEDAAFRSTKDDLLQQIAKVDREIAKRESQISKLRKKLKELEEVASKPLEATGTKRPVEEASLQPKHQSLVQKIYAENRKKAEEAHRLLEKLGPKVKLPLYNQPSDTSVYQENRTRHQCMKARLVARLRKEHAERASLHRQQSQTYAILVQEWHRKVEKLEATQKRKTKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEELSTELKNALKTHQMEDKKMRSYAVIPPLLLDAKQRKIAFQNRNGLLQPEELEALHSERKLINVWSTTEHDMFKEKYLQHPKNFGAIAQSFEHKSVADCVHHYYLTKKAENYKQLLRKSRRTRSSRNNPNNKVNNSNSTIGPIDILTTGVTTRLQREQQQKTQENPQSSSASASSGSNATTTTSTPSTTTSSSTSVTSTSSVCTTSSSSSTAVTASSSGSSSGGAASAVLTSESSPTTVITTATTATTITSTASGAPAAAAAASASVPSISETTTTSSVLTTTSMSSTSAKDAREANKENKEIKTDQKDSLLLKDIKDESQSSSETLSSREIKVEGKGALSSSSNTSATNANNASGNLQLELQQQQQQKDKKKNAGSTGGSTVTSRSKDKKKENHATPMETSDEEAQAMDAMVRGEGGGKALRAWEYVCIGEMLEYRVVVRRSGLTTATKLGCSVYALNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304427;
- 90% Identity
- -
- 80% Identity
- -