Pcyl009164.2
Basic Information
- Insect
- Platypus cylindrus
- Gene Symbol
- nfxl1
- Assembly
- GCA_949748235.1
- Location
- OX456490.1:6941463-6945149[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 3 1.7e+04 -7.9 5.6 15 19 167 171 166 171 0.81 2 18 0.2 1.1e+03 -0.3 0.4 4 10 202 208 201 208 0.95 3 18 2.9e-05 0.17 11.9 21.6 1 19 216 233 216 233 0.99 4 18 4.2e-08 0.00024 21.0 13.8 1 19 269 287 269 287 0.97 5 18 2.6 1.5e+04 -3.9 0.9 6 10 312 316 311 316 0.88 6 18 9.7e-09 5.5e-05 23.0 14.7 1 19 322 340 322 340 0.99 7 18 1.9 1.1e+04 -3.5 1.0 5 10 364 369 364 369 0.86 8 18 9.7e-07 0.0056 16.6 7.4 1 18 375 392 375 393 0.97 9 18 0.00038 2.2 8.3 16.2 1 18 427 444 427 445 0.94 10 18 2.2e-08 0.00013 21.9 13.4 1 19 454 472 454 472 0.98 11 18 0.91 5.2e+03 -2.4 1.0 5 10 500 505 500 505 0.94 12 18 0.00043 2.5 8.2 6.3 10 19 521 530 518 530 0.92 13 18 0.17 9.8e+02 -0.1 7.3 3 12 541 550 540 550 0.88 14 18 3 1.7e+04 -4.8 3.5 14 19 579 584 579 584 0.86 15 18 0.0019 11 6.1 5.4 1 12 620 631 610 631 0.90 16 18 2.6 1.5e+04 -3.9 3.6 5 10 648 653 646 653 0.87 17 18 2.6e-05 0.15 12.1 17.4 3 19 662 678 661 678 0.94 18 18 0.00064 3.7 7.6 10.1 1 16 723 738 723 744 0.82
Sequence Information
- Coding Sequence
- atgaataattcaACCACGAATCCATGGAAGAAAAACAAACCACCATTGAAACATAATAGTATCACTTCAAATCATCAAAAACCAACAGgcgaattaaaatttaaagaaagtcaaaaaaaattgcaaaatgcTGTTGAGAAACATCtcagaaattatgaattatcATCATCAGATGATGAAGAGGATGAAGTGGAGTCGTCAAATATTATTGAAGTCGCGCTGAAGAAATATACAGATAGTGGTGGTACAAATGATCAACTTATTAAAACACAAGCATTTATCGAAGAATCATTTCTATCAGGAGCGAATAGTTGTTTGATTTGTATTTCGAAAATTCGAAGAGATGACCATATTTGGAATTGCATAAACTGTTTCGGAGCATTTCATTTAACCTGTATACAACGTTGGTCAAAAGACACAGTTGTACAATTAAAACGGCAGCAAGAGCAACAACAAGTTGAACAAATTGGATTTAAAGGACGGAAAATTGAATGGTGCTGCCCAAAATGTAGACACGAGTACAAACCAGATGAAATaccattaaaatatatttgtttttgtgGAAAAATTGAAGATCCTAAATATCAACCGTTACTAGTTCCGCATTCATGCGGTGAAATATGCAGAAAGCAATTAAAACCATCATGCGGACATTGTTGTTTATTACTTTGCCATCCAGGACCATGTCCTCCATGCCCAGTTACAATTAATGTAACATGTTACTGTGCCTCACAATCACCAACAGCACGCCGATGCAGTGCCAGAGGTTGGTCATGTGGTAAACGAtgtggaaaattattaacgtGTGGAAAACATAGTTGTAATGAATCGTGTCATTTAGGTGAATGTAAACCTTGTACCAAAAAAAGTATACAGAAATGTTTGTGTGGTGCTCAACAAAAATTACGTGATTGTACATTGCCTATATGGCAATGTGATAAATTATGTGGAAAATCATTAAACTGTGGCAAACATAATTGTCAAGAGATATGCCACAAAGGCGAGTGTACTGAATGCCCATTAACACAACCACGGACATGTCCGTGtggaaaaagtaaatttatacTACCTTGTACTGAATCAACACCAACATGTCCAGATACATGTGGGAAAGTGTTAGATTGTGGAATTCATACGTGTAATTTTCGTTGTCACAAGGATAAATGTGGAATGTGTTTGGAAGTTGTAAGAAAATCATGCCGATGTGGTCTACACATCAAGGAAATTCAATGTTCCAAACAGTATTTATGTGAAAGTAAATGTAAAAGAATGAAAGACTGTAATAAACATCCATGCAACCGAAAATGTTGCGATGGTGATTGCCCACAATGCGAAAAACCATGTGGACGTACATTACAATGTGGTATACATAAATGTCCATCTGCATGCCATCAAGGTCCATGTTTTCCATGTCAACAGACTAGTACTGTGTCGTGTCGATGTGGTGCGACGAAAATTGTGGTACCATGTGGACGGAAACATCGTACTAAACCACCGAAGTGTAATAAATTATGCTCAATACCACCAAATTGTCATCATACCAAACGTGATAAACACAATTGCCATTTTGGTGATTGTCCACCATGTAAACAAGTTTGCAATAAACAATTACCAAATTGTGAACATTTATGTAAGCGTACATGCCATTCAGCTGTAATGGTCGCAGTAGAAATGGAAAAAGCACCATCAATGCCATGGGAACAAAGGGCACCATTATTTGAAAGGAAATCTTTACCATGCCCAGATTGTAAAGTACCAGTTATGGTTACATGTTTAGGTGGTCATGAAACTGCCAACTGGTTATGCCATCTAGCTAAACCATCAAGTTGTGGTCGACCATGTGGACGAATTTTAGCATGCACAAATCACACATGTACTTTAATGTGTCACACTGTCACTAGTGTTGATCATGATTCCACAAAAGCTGGCGAGAATTGCAGTAAATGTGAAAATCCTTGTTCGAAACCACGTCCCAATGGTTGTAAGCACCAATGTCCACTACCATGTCACACGGGTGAATGTCCACCATGTAAACAAATGTTACGGATCAAATGTCATTGTGGACTTGCACAACCGTACATTTCATGTTTTGATTGGTTCACATCGACTGAAGAGACACGGGAAATTTTGCAAAGTTGTGGCAATCAATGCCCGAAGAATTATCCTTGTGGTCATCGTTGTAAATCAAACTGTCATTCTGGTCTGAAATGTCCCAATGCTGAtcaatgcaaaaaaaaagtgaaaatattttgtaaatgTAAACGTTTAAAGAAAGAATTTCAATGTGAAGCAGTACTAAAAAAAGGTTTAACTGTTATCGCATGTGATAACATATGTCAGGAAAAACAAAGTGaggaaaagatgaaaaaagaacaagaagaaaataCCCGTAAAGAACAACAAGCATTAAAAGATGAAAAAGATATGGAAAattatattagaaaatattcaTCAGCCAGAAAGAAACGTAACGGAAGAAAATGGGTTGAAGAAAATGATATTGAAGAAAAAGGtttatggaaaaataaatggattatatcaatttccatttctgtaatttttatatcaattttttctgcttaccagttttttttttaa
- Protein Sequence
- MNNSTTNPWKKNKPPLKHNSITSNHQKPTGELKFKESQKKLQNAVEKHLRNYELSSSDDEEDEVESSNIIEVALKKYTDSGGTNDQLIKTQAFIEESFLSGANSCLICISKIRRDDHIWNCINCFGAFHLTCIQRWSKDTVVQLKRQQEQQQVEQIGFKGRKIEWCCPKCRHEYKPDEIPLKYICFCGKIEDPKYQPLLVPHSCGEICRKQLKPSCGHCCLLLCHPGPCPPCPVTINVTCYCASQSPTARRCSARGWSCGKRCGKLLTCGKHSCNESCHLGECKPCTKKSIQKCLCGAQQKLRDCTLPIWQCDKLCGKSLNCGKHNCQEICHKGECTECPLTQPRTCPCGKSKFILPCTESTPTCPDTCGKVLDCGIHTCNFRCHKDKCGMCLEVVRKSCRCGLHIKEIQCSKQYLCESKCKRMKDCNKHPCNRKCCDGDCPQCEKPCGRTLQCGIHKCPSACHQGPCFPCQQTSTVSCRCGATKIVVPCGRKHRTKPPKCNKLCSIPPNCHHTKRDKHNCHFGDCPPCKQVCNKQLPNCEHLCKRTCHSAVMVAVEMEKAPSMPWEQRAPLFERKSLPCPDCKVPVMVTCLGGHETANWLCHLAKPSSCGRPCGRILACTNHTCTLMCHTVTSVDHDSTKAGENCSKCENPCSKPRPNGCKHQCPLPCHTGECPPCKQMLRIKCHCGLAQPYISCFDWFTSTEETREILQSCGNQCPKNYPCGHRCKSNCHSGLKCPNADQCKKKVKIFCKCKRLKKEFQCEAVLKKGLTVIACDNICQEKQSEEKMKKEQEENTRKEQQALKDEKDMENYIRKYSSARKKRNGRKWVEENDIEEKGLWKNKWIISISISVIFISIFSAYQFFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -