Pcyl001700.1
Basic Information
- Insect
- Platypus cylindrus
- Gene Symbol
- Zmiz1
- Assembly
- GCA_949748235.1
- Location
- OX456488.1:14294085-14307110[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.097 8.4e+02 -0.2 0.7 4 24 511 531 508 536 0.88 2 2 5e-25 4.3e-21 74.4 3.8 1 49 588 636 588 637 0.98
Sequence Information
- Coding Sequence
- ATGCTGGGATATACTTCCTATAGggaCTGGTCACCGGGTGGAATTAACACCCAGCAGCAGTTGTCCGTCGTGACCACGGTGTTTGGAGTCACCACGTCCACACAGTCGGGCCCCCACGGGGCGTACGCAGGGGGCCCGGCCCCACAGGCATTCGCCAAAGGCCAACCGAACGGTTACGGGGGAGCAAACAATTTTCGAGGCTATGGACTTAACAATTATGGTCCAGTACCAAATGGTATGAACCATCAGCCTGATCATACAGGAGGAGgAAACGCTTTATCAACTGCTGCAATGGTTGCTGCCGCTACTGCAACAGCAACTGCTACTGCTGTAGCCTTACAAGAGAATGCCAATCAATTCACCAATCAGCAATACACTCAAAGCTATCAGCAACGAATGATGCCAATGAATGGAATGAATCCAATGGGTATAAATGGTatgaataatatgaatcaaatgAGTGCAATGCATGGAATGAATGGTATGGGAAACATGGgagGTTTGGGTCCAAAAATGACTATACCAATGCAACGACCTGGCGGAGCAGCATCGAATAATATGTTTCCAAATCGAAGGATGGCACCTTATCCTTCGGCAGCAATGCATTTATCTCAAAAAAGAGGTTCGCAGAATTATTCGTCTGATCCATGTTCAACGATGGGCAATCCTAATATGGGTCCAGGTAATATGAGTAATCCAAACATGGGCTCAATGGGTCCAAATCTGGGTCCAAATTCAATGAATCCTAATTTCAATCCAAATAGTCAATACGGAAATTACGGTACAAGGCAACCTAATTACAACCAGTATCCTACCCAACAAAGTTTGGGACCCACTGGCAATTTTGGACCCGGATCTATGGGACCAGTAACTAATCCTCGACAGTTACGAGGTGCCACGCCTCCATACACCAACCAAGGACAGTATTTTAATGGTTCAATGAACCAGTTTCCTTCAAACAATTCTGGTCAGTTTAATATGAACAATATGGGACATAATGTTCAAGGACAGTATACTTCAACTAATCAGTTTCAACAAGATGTAGTTCTACGCAATAATATGAATTATCAACATAGTCCAATACCAGGGAATCCTACACCACCTCTTACACCTGCCAGCAGTATTCCACCATATATTAGTCCAAATCCTGATGTTAAACCTAACTTTAGTGATATGAAACCTAATTTTACTGATATAAAACCTAATTTTCCTGATATAAAACCAATTTTACCACAAAAAGATGAGGAACTTAGGCTCACATTTCCAGTTAGGGATGGAATCATTTTACCACCATTTAGATTAGAGCATAATTTGGCTGTTAGTAATCATGTGTTCCAATTGAAGCCCACTGTTCACCAGACATTAATGTGGCGTACTGACTTAGAATTGCAATTAAAATGTTTCCATCATGAAGATCGACAAATGAGCACTAATTGGCCTACTAGTGTACAAGTATCTGTAAATGCAACACCATTGGTCATTGATCGGGGCGAACATAAAAATGCCCATAAACCGCTTTATTTAAAAGATGTGTGTCAGCCAGGAAGaaatacaatacaaattacagtAGCAGCATGCTGTTGTtCGCATTTATTCGTTTTACAATTAGTTCATCGGCCTAGTGTAAGATCAGTTTTACAAGGATTATTAAAGAAACGTTTACTGGTCGCAGAACATTGCATTGCAAAAATTAAGAGAAACTTCACTGGAAATGGAACAACACAAAATGATCGAGATGCAATTGAACAAACAGCCTTAAAAGTATCATTAAAATGTCCAATTTCTTTTAAGAAAATCACCTTACCAGCTAGAGGGCATGATTGTAAACATATACAGTGTTTTGATTTGGAAAGTTACTTATTAGTTAATTGCGATAAAGGCAATTGGAGATGCCCTGTATGCAAtaaaacAGCTCAATTAGAAGGCTTGGAAGTCGATCAATACATGTGGGGTATATTAAATACGTTAGTTGCCAGTGATATAGAAGAAGTAACAATGGATAGTCAAGCTAATTGGAAACCATCAAAGAATGGCATTAAGTTGGAAGATGATGGTGGTAATAACGAATCATCATGcacatcatcgtcatcatcaacatcatcatcgaAACGTATAATGAATAAAGCAATGTCACCAGGCAGTATGACATTACCCACAATGAATAATTGGGATATGTCACAGGCGATGTCTCCATATTTAACACCTGATATGAATAGTATTGCAAGTGGATCTATGATCAATGCTAATCAATCATATAATAATTCACAAAGAGGAACAGGTATTGATTCATCGAGTCTTGGTCCATATGCAAATACTGGTGATTATCTAAGTGGCAATGGGCCTTTATCGCATTTAAGTGAAAGTGTCAATCCATTAGATCCTCTTAATGCAATGGAGAAGAGTTTAAATGACCAGatGCCACACACACCCCATACACCTCATACACCGCACACACCCCATACGCCGGGTGGTGCAACACCGGGTAGCGCCCATACACCGGGAGGTCCACCAAGTGTACCATCATCAAATATGGATAGTTTAAATAATAGTGCAGGCAgtaacaacaacaacaataataataacaatggaAATGATATACCGAGTGATTTGAATTTCGATCCAGCGGCAGTTATTGATGGTGAGGGAACAGGACAGGAAGCTTTAAATctTTTACCCGACAGTGTAGATCCTATGGAGCTTCTATCATATTTAGATCCACCCGATTTAAATACACCACCATCGAGCGGTAGCAGTTCCGGCCATAATAATACGTCCACAAATGACGATATTTTGGCtctatttgaataa
- Protein Sequence
- MLGYTSYRDWSPGGINTQQQLSVVTTVFGVTTSTQSGPHGAYAGGPAPQAFAKGQPNGYGGANNFRGYGLNNYGPVPNGMNHQPDHTGGGNALSTAAMVAAATATATATAVALQENANQFTNQQYTQSYQQRMMPMNGMNPMGINGMNNMNQMSAMHGMNGMGNMGGLGPKMTIPMQRPGGAASNNMFPNRRMAPYPSAAMHLSQKRGSQNYSSDPCSTMGNPNMGPGNMSNPNMGSMGPNLGPNSMNPNFNPNSQYGNYGTRQPNYNQYPTQQSLGPTGNFGPGSMGPVTNPRQLRGATPPYTNQGQYFNGSMNQFPSNNSGQFNMNNMGHNVQGQYTSTNQFQQDVVLRNNMNYQHSPIPGNPTPPLTPASSIPPYISPNPDVKPNFSDMKPNFTDIKPNFPDIKPILPQKDEELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMWRTDLELQLKCFHHEDRQMSTNWPTSVQVSVNATPLVIDRGEHKNAHKPLYLKDVCQPGRNTIQITVAACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLVAEHCIAKIKRNFTGNGTTQNDRDAIEQTALKVSLKCPISFKKITLPARGHDCKHIQCFDLESYLLVNCDKGNWRCPVCNKTAQLEGLEVDQYMWGILNTLVASDIEEVTMDSQANWKPSKNGIKLEDDGGNNESSCTSSSSSTSSSKRIMNKAMSPGSMTLPTMNNWDMSQAMSPYLTPDMNSIASGSMINANQSYNNSQRGTGIDSSSLGPYANTGDYLSGNGPLSHLSESVNPLDPLNAMEKSLNDQMPHTPHTPHTPHTPHTPGGATPGSAHTPGGPPSVPSSNMDSLNNSAGSNNNNNNNNNGNDIPSDLNFDPAAVIDGEGTGQEALNLLPDSVDPMELLSYLDPPDLNTPPSSGSSSGHNNTSTNDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01108118;
- 90% Identity
- -
- 80% Identity
- -