Pcyl000534.1
Basic Information
- Insect
- Platypus cylindrus
- Gene Symbol
- -
- Assembly
- GCA_949748235.1
- Location
- OX456488.1:3016701-3020223[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0097 19 4.9 0.0 16 30 122 135 118 139 0.80 2 3 0.0017 3.2 7.4 0.0 16 35 150 168 146 169 0.85 3 3 0.0011 2.1 7.9 0.1 15 34 205 223 203 225 0.85
Sequence Information
- Coding Sequence
- ATGGATGAGAACACATCGGATTTAAGAGCACTTACAAAAAAATTAGTCAACGAGGAAGATCCAAATGTTTCGGAAAATCAAAAGGATAAAAACGCGATCGAATCGAACTTGGCTACACAATCAGTTGATAATTCTGCTTCAGATAAATTGGAGATCGTAGATAATGAAGTAGATCCAGAAGGTGAAAAAAGCCAAGgagAAAGACCATATAAATGCGAATTCTGCCGTTATACAAGTGCTCGAGCAGGTGACTTAACGAGACATAAAAGAAcacacactgATGATAAGCcctttaaatgcaaattttgccCTTATGCATGTGCTGCCTCAGGATACTTAGCGATCCATGAAAGAACGCACACTggTGATAAGCCATATTTGTGCGAAACTTGCGGTAAGGCATTTCATCGACAAGATGCCTTAAACGGGCATTTAAgaattcacactggTGATGAGCCATATTTGTGCGAAATTTGCGGTAAGGCCTTTCGTCTACAAGAAGTCTTAAACAGACATTTAAGAAatcacactggTGATAAGCCATGTAAATGCAAAATTTGCGATTATGCATGTGCTCAAGCAGGAGACTTAGTGAAACATGAAAGAATTCACAGTGgTGATAAGCCATATTTGTGCGAAATTTGCGGTAAGGCATTTCGTCAACACAGTAACTTAAAAAGACATTTAAGAATTCACACCGGAACTGAATCACCTGAAGCTGAATCATCTACAAGTTCATCAAATCCAGAatataattga
- Protein Sequence
- MDENTSDLRALTKKLVNEEDPNVSENQKDKNAIESNLATQSVDNSASDKLEIVDNEVDPEGEKSQGERPYKCEFCRYTSARAGDLTRHKRTHTDDKPFKCKFCPYACAASGYLAIHERTHTGDKPYLCETCGKAFHRQDALNGHLRIHTGDEPYLCEICGKAFRLQEVLNRHLRNHTGDKPCKCKICDYACAQAGDLVKHERIHSGDKPYLCEICGKAFRQHSNLKRHLRIHTGTESPEAESSTSSSNPEYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01216215;
- 90% Identity
- iTF_01216215;
- 80% Identity
- iTF_01216215;