Pcyl010672.1
Basic Information
- Insect
- Platypus cylindrus
- Gene Symbol
- GATA5
- Assembly
- GCA_949748235.1
- Location
- OX456491.1:6240986-6246124[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 3.2e-14 52.2 2.3 1 35 398 431 398 432 0.97 2 2 1.6e-18 3e-15 55.4 6.6 1 35 454 487 454 488 0.97
Sequence Information
- Coding Sequence
- ATGGAACCAAAATCCGAATCACAAGAATCCCAAGAATGGGGAACGACCGAAgagattaaaataaaaattaaagaggAATGCGTCAGTAACACTGAGACCTGCACCCCGACAAATGACCAACAACCAGAAGAACAAATGAATGAAACACCACCATCATCTACTAATCAGCAGTTCGATGATTCAAGTCAAGTGCAGTCACACCAACAACACAACCATTCAGAACCGTTAGCAACTGTGATCCGACGAAATGTAATAACACCAGCCGGTACAATTGAAACGGTCGAAGATCAAATGGAAGTACAAAACGAAGAAATTGTTAATACAACAGGGACATCAATAGAAGCTGCGTCTAGTGCTAATCAAGAAACAAAAGTGCCATATGAAATTATTGCGCAGGTATCAACAGGGAATGGAGCGGGCAGTTTCACCATTGCTCATCCAGCAACTGATCAATCTGTTTATCAATCAACATCACATGGTGCGGCATCCACACCACCAAATCAACAGCAGTATTCAACATATGCTCAACACCACCAGGCACATTCGCTAATTCTTACTATACCAAGCTCGAAtggtgctggtggtggtggtagtggtggtggtggtgacaCTGTCATTCATCATTCGATGCCGACAATTGTTGAAACGGTTGCCATTGATTCGCCAACGGACTATGCGAATTTAGAGCCAGCTCATTATCAGCATAATGGTGGAAACAATCAGTATCCACCGGATGGTTCTCAGTATTTACAACAGCATCAGTATCAGAATCTGCAATATCAATTAGATCGATCTAGTAGCAGTGGCTCACCAACGAATAATATGCTATTTCGAAATAACGATCCTACATTGGCTTCGTCACGATATTCAGATCCACGTTTAACATCAAATTACGAGCAGCAAATGAATCAAATCACATTAACATCACCACAAACTGGGCATTCATTTCAAGTTCAAGCAACTGCTGATGGTTGGTCAACTCCAACACCAATTTCAGCTGCCCAATATCAATCATCTTCTTCATCAGCACCAGTATATCATAATCAAGTAATGCCCGATAGTAGCGGTACTCAATTCTATGTGAACAATAACAATTGGACACCAGGCACTACAATTGACGATGgtaatgtaattgtagcaCTACCAACGGGTCATAGATCGACAGCAGCATCTGAGGTACTTGTCAAAGAATGTGTGAATTGCGGTGCTAGTGTCACACCACTTTGGCGTAGAGACGGTACTGGTCATTATTTGTGCAATGCATGTGgcctatataataaaattaatgggGTGAATAGGCCGCCGATCAGGCCAACAAAAAAGCCACAAGCGACTGGCAATCGTCGTACCGGTGTCTCATGTGCAAATTGCAAAACAACAAACACAACATTATGGCGGCGTAACAATCAAGGAGAGCCAGTCTGTAATGCATGTGGTTTATATTACAAATTACACGCAGTCAATCGACCAATGACAATGAAAAAAGAAGGAATCCAAACAAGAAAAAGACGACCCAAAAGTGCTGGAACCAATAATACAATGCATTCTGGTTTACCCTGTAATCCGTCGCTTCATCAACAAAGATTAAACAATCATTCAAATGCCGCCTACTATCAACATCAAGAAATTAGTATGGAATTATCACGTGATGAATATGAATTGGCACCAAATACTATTTACCAACAAACTTATCGCCATATATCCCAatcacaaccaccaccaccaccaccaccaccaacatcTTCACCATCTTCATCAGCATCCCAAATGAATAATATAAATCCACAAATTGCTAAtgttcaaTTACAACCAATCATAGCCAACCAGGATGATGAACAAAATAACGTAATTTTAACACCAACAGTTGTACAATATCAAAGTACAACGAAATATGAACCCGAAGAAAGTCATGATGAATCAATGGGACAATAG
- Protein Sequence
- MEPKSESQESQEWGTTEEIKIKIKEECVSNTETCTPTNDQQPEEQMNETPPSSTNQQFDDSSQVQSHQQHNHSEPLATVIRRNVITPAGTIETVEDQMEVQNEEIVNTTGTSIEAASSANQETKVPYEIIAQVSTGNGAGSFTIAHPATDQSVYQSTSHGAASTPPNQQQYSTYAQHHQAHSLILTIPSSNGAGGGGSGGGGDTVIHHSMPTIVETVAIDSPTDYANLEPAHYQHNGGNNQYPPDGSQYLQQHQYQNLQYQLDRSSSSGSPTNNMLFRNNDPTLASSRYSDPRLTSNYEQQMNQITLTSPQTGHSFQVQATADGWSTPTPISAAQYQSSSSSAPVYHNQVMPDSSGTQFYVNNNNWTPGTTIDDGNVIVALPTGHRSTAASEVLVKECVNCGASVTPLWRRDGTGHYLCNACGLYNKINGVNRPPIRPTKKPQATGNRRTGVSCANCKTTNTTLWRRNNQGEPVCNACGLYYKLHAVNRPMTMKKEGIQTRKRRPKSAGTNNTMHSGLPCNPSLHQQRLNNHSNAAYYQHQEISMELSRDEYELAPNTIYQQTYRHISQSQPPPPPPPPTSSPSSSASQMNNINPQIANVQLQPIIANQDDEQNNVILTPTVVQYQSTTKYEPEESHDESMGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -