Basic Information

Insect: Platypus cylindrus
Gene Symbol: su(Hw)
Assembly: GCA_949748235.1
Location: OX456491.1:7166930-7172999[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.045 2.2 8.9 3.8 2 23 169 190 168 190 0.97

2 16 2.6e-05 0.0013 19.0 4.1 1 23 195 217 195 217 0.97

3 16 0.00011 0.0053 17.1 3.8 1 23 223 245 223 245 0.97

4 16 0.0072 0.35 11.4 2.2 1 20 251 270 251 270 0.96

5 16 9.1e-05 0.0044 17.3 0.3 1 23 279 301 279 301 0.96

6 16 0.00092 0.044 14.2 0.1 1 23 543 566 543 566 0.93

7 16 2.2e-05 0.0011 19.3 6.5 1 20 572 591 572 594 0.95

8 16 2.8e-06 0.00014 22.1 3.9 1 23 600 622 600 622 0.98

9 16 0.00014 0.007 16.7 1.9 1 23 628 651 628 651 0.94

10 16 0.0017 0.082 13.3 0.7 1 23 665 687 665 687 0.97

11 16 0.0016 0.078 13.4 5.2 1 23 693 715 693 715 0.97

12 16 2.6e-06 0.00013 22.2 0.5 1 23 722 744 722 744 0.96

13 16 5.9e-05 0.0029 17.9 1.3 1 23 750 772 750 772 0.98

14 16 8.9e-07 4.3e-05 23.7 0.8 3 23 780 800 778 800 0.96

15 16 2.6e-05 0.0013 19.0 0.1 1 23 806 828 806 828 0.99

16 16 0.07 3.4 8.3 0.7 1 23 833 856 833 856 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.045	2.2	8.9	3.8	2	23	169	190	168	190	0.97
2	16	2.6e-05	0.0013	19.0	4.1	1	23	195	217	195	217	0.97
3	16	0.00011	0.0053	17.1	3.8	1	23	223	245	223	245	0.97
4	16	0.0072	0.35	11.4	2.2	1	20	251	270	251	270	0.96
5	16	9.1e-05	0.0044	17.3	0.3	1	23	279	301	279	301	0.96
6	16	0.00092	0.044	14.2	0.1	1	23	543	566	543	566	0.93
7	16	2.2e-05	0.0011	19.3	6.5	1	20	572	591	572	594	0.95
8	16	2.8e-06	0.00014	22.1	3.9	1	23	600	622	600	622	0.98
9	16	0.00014	0.007	16.7	1.9	1	23	628	651	628	651	0.94
10	16	0.0017	0.082	13.3	0.7	1	23	665	687	665	687	0.97
11	16	0.0016	0.078	13.4	5.2	1	23	693	715	693	715	0.97
12	16	2.6e-06	0.00013	22.2	0.5	1	23	722	744	722	744	0.96
13	16	5.9e-05	0.0029	17.9	1.3	1	23	750	772	750	772	0.98
14	16	8.9e-07	4.3e-05	23.7	0.8	3	23	780	800	778	800	0.96
15	16	2.6e-05	0.0013	19.0	0.1	1	23	806	828	806	828	0.99
16	16	0.07	3.4	8.3	0.7	1	23	833	856	833	856	0.97

Sequence Information

Coding Sequence: atggATACTGATAGAGTCGATTTATCATTAATTTGCCGTACGTGTAAAGCGGTATCGGATCaaatgaaaaacatttttgaaGCATTAGATCCTGATAATATGTCTATAGACAACCCCCGTATTGACGAGATGCTAATGGCCTGTGCATCTGTACagATTTCATTTGGAGATGGTTTACCGACTTTAATGTGCTCAATGTGTATTCAAAGTTTAAAAAATgcttttcaatttaaaaaacaatgcGAATCTACTGATGCCAGTCTACGACAGTATACGAAAACTGAAAGTGAACACTCTGCTATAAAACAAGAATTACACCATTCGGTGTTTATGGAATCCATAAACACATTAAACAATTTACTAACTTCGAATGAGCCACAATCAAAAGATGAACAGTCATCTCTTATATCAGTGAATGATACTTTTACCTCAAGTACAGATCATAAAATTCGAAATTCCGAAGCTGATTACATTCAGCTTTTGGATCATAATCAACTTTTGGTAACTTGTCGGGAATGTTCGAAGTATTTTACAACTTTAGATGGTTTAAGGTGTCATAAACGTACACATTCAGGTGACACGTTTAAGTGCAAGCAATGCGATAAAGAGTATACAAGAAAAAATCATTTGGAACGTCATGAAACCATCCATGGAAAGCGAAAAGTTCACGTATGCAAAATATGCAATAAAACATTAACAAGAATAGAACATCTGAAAAGGCATTTAGTTACCCATTTAAGAGAGAAGCCGTTTAATTGTAAAACCTGCAATCGTGGCTTCAATCGAATCGAACATTTACATAATCATATTCCAAGGTGTAAAGGTGATTTTGTTCACGTGTGTCCCGTATGTAATAAAGCATTCGCTCGCGAAGATAGTTTAGATGTACATAAACAACAACATAATACTGCCCAATTACTGCTGCCTACCATTGAGAATTTAGAAAACATTGAGGACCATTATTATGaaGTCGATTACGATGACAGTACTAAAATCTTCTCCGACAACTCCGATCTGGAAGATTGTTTCGAGCCACATGTCGAAGTGATAACAGAAAGTATCGATGATAGTAAAATGGAAATGGGAAGTGATTGTGGTGGTCATGCTGATGGTGGTGTATCACCTATCGATGATAGTAGCTCATCCGAAGATACAATTCAACGtacagaagaagaagaagtgaTACACAAAATTAAGCAAAAacatagaaagaaaaaattaaaagcaaacaTCAAACCAATTGGTGATAATTTAGATTCAACAAAAGAAGCACAACtgccactaccaccaccatcagATGTAATCGATAGTGATAATGATGAAAAACCATTAGCTGATTTAGTATCACATGTAAAATCAGAGAATGAATTGATACAAATTGACAAACATCATTTAAAAGAGGATAATTATGGTGCAGACGGTAACGATGAAGGTCACGACAGTTCAGGCGATACTTCAGATGAAGAGTATTTACCGAAGAAAGCAACAACTCTATCACCGAATAGCAGAAAAAGAGGTAGACCTCGTAAACATCCACCAAAACAGAAAGCAGGAGGACGAAGAGGACGGCCTCGAGGAAGTATAGctagaaaaaaattcaaaattgacGATGAGGACTATGGCGATTTTCCTTGTACAATTTGCAATGAAATTTTTGATAGATTGAGTTTACTAGACAAACATGGAAAAGAAGCCCATCCTGGACTTAGAGTTCATAAATGTAATATTTGTGGCAAAGATTTTAATCGGCAAAATCATTTGAAACGTCACATGATTTGCCATTCGCAAGATAAACCGTACACATGTGAAATTTGCACTAGAAGTTTCAATCGACGTGATCACTTAAATCAACACCAAAAACTACATGAAATAACTGGTGATCATCCGTGCGATATTTGTGAAAAACCATTCAATAGATTGGATCATTTAGTTAAACATAAAGCATCTAAACATGGTATTGGCGAAAAAACTACTtattccggggagaaaaaatataattgtgAAATATGCCAGAAAGGCTTCACCACTGAAAAATATCGCGATGTTCATATGAAAGCGCACAATGGCGAGAAAACATTTAGATGTAAAGTTTGCGAGAAAACATTCTTATCAAAATCGCATCTGACAGAACATACAAAATTCCATAATGAGAATTCaaagaaatttttatgttCCGAATGTGGACAGCGTTTCATTCGAAATGATTATCTAGTGATACATATGCGTAGGCATCGGGGAGAGAAACCGTTTAAGTGCCGTTTTTGTGGCAAAGGTTTTCCTCGAACAACAGATCTAACAGTTCACGAGAGGTATCACACCGGTGAAAAAACACATTTATGTACTGTATGTGGGCGTGGATTTGGAAGagCATATAACTTAACAGTTCACATGCGTACGCACACAGGTGAAAAACCCTATCAATGTACATATTGTGAAGCAGCTTTCGCTCAAGGAAATGATTTGAAAGCGCATATTCGCCGACATACTGGTGAAAGATTCCAGTGCGATTTGTGCACTGAAAGCTTTTTAATGGGCTATTTATTGACACAACATAAAAGAACAGTTCATGGTTTGAATGTTGTCAGCAATATACGTCGTCTAAAACCGGTAAACAAACAAGAAAATCCTGATGATCCACCACCAATTACCATTCCATTGCCAAAGCCAGTTGTACCCGAAAGTTTATTGTTCAGTAATTTGTTGCCGTCAATtcaaaaacaagaaaaaccCGATGACGTATTAACGTCATCGGCAACTGGTACATCACTTGCTCTTCCATTATCTACAAAAACGGGGGTGGTACCTGAAActttttttcattcaattaaTAGTTTACAAGCGCAATTATCTTTTTCGCAAATGCAATTTAATGCCACAAGTCAAAGACCAGCGGTATAA
Protein Sequence: MDTDRVDLSLICRTCKAVSDQMKNIFEALDPDNMSIDNPRIDEMLMACASVQISFGDGLPTLMCSMCIQSLKNAFQFKKQCESTDASLRQYTKTESEHSAIKQELHHSVFMESINTLNNLLTSNEPQSKDEQSSLISVNDTFTSSTDHKIRNSEADYIQLLDHNQLLVTCRECSKYFTTLDGLRCHKRTHSGDTFKCKQCDKEYTRKNHLERHETIHGKRKVHVCKICNKTLTRIEHLKRHLVTHLREKPFNCKTCNRGFNRIEHLHNHIPRCKGDFVHVCPVCNKAFAREDSLDVHKQQHNTAQLLLPTIENLENIEDHYYEVDYDDSTKIFSDNSDLEDCFEPHVEVITESIDDSKMEMGSDCGGHADGGVSPIDDSSSSEDTIQRTEEEEVIHKIKQKHRKKKLKANIKPIGDNLDSTKEAQLPLPPPSDVIDSDNDEKPLADLVSHVKSENELIQIDKHHLKEDNYGADGNDEGHDSSGDTSDEEYLPKKATTLSPNSRKRGRPRKHPPKQKAGGRRGRPRGSIARKKFKIDDEDYGDFPCTICNEIFDRLSLLDKHGKEAHPGLRVHKCNICGKDFNRQNHLKRHMICHSQDKPYTCEICTRSFNRRDHLNQHQKLHEITGDHPCDICEKPFNRLDHLVKHKASKHGIGEKTTYSGEKKYNCEICQKGFTTEKYRDVHMKAHNGEKTFRCKVCEKTFLSKSHLTEHTKFHNENSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCRFCGKGFPRTTDLTVHERYHTGEKTHLCTVCGRGFGRAYNLTVHMRTHTGEKPYQCTYCEAAFAQGNDLKAHIRRHTGERFQCDLCTESFLMGYLLTQHKRTVHGLNVVSNIRRLKPVNKQENPDDPPPITIPLPKPVVPESLLFSNLLPSIQKQEKPDDVLTSSATGTSLALPLSTKTGVVPETFFHSINSLQAQLSFSQMQFNATSQRPAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -