Pcyl012874.1
Basic Information
- Insect
- Platypus cylindrus
- Gene Symbol
- CSRNP3
- Assembly
- GCA_949748235.1
- Location
- OX456493.1:1898919-1901715[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.49 8.4e+03 -3.6 0.1 43 79 6 42 3 66 0.52 2 4 0.078 1.3e+03 -1.0 2.9 62 103 137 178 110 184 0.48 3 4 1.2e-87 2e-83 279.5 17.3 1 218 184 439 184 439 0.86 4 4 0.54 9.2e+03 -3.8 0.5 65 90 456 482 443 501 0.47
Sequence Information
- Coding Sequence
- atgtcatcatcatcagataATTTGACAATGTTGAATTTCGAAACGaatcaacaaaatacaaaCGATTCATCATTAAATCTTGATTTACATCAAAGAACATCAACGGAATTAATGGGAATAATTGTTCCCGTAGACgataatcatcatcataataGTAATACAGATCGATCAGAAGATGGCTCTGATTCCGGTTTAGGTTCCGAATTAATTTTGGAGGAACATGAAATAACTATCACGGGCAGCACCAATGTGATGACATCACCATCACCAAATTCATCGACATCATCAAATGAAATGATTGATGATCTTTTAAATGAAGTAGGcgaacaacagcaacaacataataataagaaagTTGTTGATATAATGGAAGTGCCACTACTAGATGGCGGCACTCCAAACAATGTCATTCgtaagcagcagcagcagcagaaaCAATCAATACTAAAATCAACGAATCGGAATCGAAAGCGTAAATTATCGTTATCAACATCAACAATGATGGAAGACGATGTAACAGCAGAAGACGATGACGAGCAACCGTTGTCAAAGAAAAAACGTCACGTATCATTCAGTGATATTACCGTATTTTATTTTCCTAGAATGCAAGGATTTACATGTGTACCATCGAAAGGTGGTTCCACATTGGGTATGGCACCACATCATCATCAAATGAAAACGTTCTCTTTGTCCGAACATGCGATTGAACAAAAAAAGCTACACCGTCTACAAATCTTACAGCAACAAATGGAAAATGGtcagcagcagcagcctgATGGATCATTATCACCTGCCATAATGGAAATAACTAGTGATGACACCACTGCACCGCCATCTAGTGGTATGAGTAGTGAAGACGACTTTACTGTTCAGAATCAAGTCGACGATTGTGATCCTGATGATAGTGGTGTTGCCGTCGGTGAGGATAGTAGCGATGAAACAGCAACATCTGAAGAATCGGAAATCGAAGATCTCGatgaaaattgttattatttcctTCAGCCAGTTTCAATTAAACAACGTCGTGCTCTATTACGTGCTTCCGGTATACGGAAAATCGATTCGTATGAAAAAGCTGAATGCGAAACAATACGTACATCACGTGAATTTTGTGGTTGTGCGTGTAAAGGTTACTGTGATCCAGATTCGTGTTCATGTAGTCAAGCCGGTATTAAATGTCAAGTGGATCGTTCGAATTTCCCATGCGGTTGTACTAGTCGCGATAATTGTGGCAATACATCCGGTCGCATTGAATTCAATCCGATCGGTGTACGTACGCATTTTATTCATACATTGATGCGTTTGGATTtagaaaagaaacaaaatgaTGAAGAAGAGGATGATGGCCGGAATGAACGAATGTTAAGAAGAAGAGATCGACATCAAAGGCAACTAAGATTTGGTGCAGTACAAGAAGATGGCGTCgtgcaacaacaacaacaacagcaatttttaacaaatgatGATGGATGGTTGCATTCATCATCAACCACCACGTCATTGGGCAGTAATGATTTACCACcgacatcatcatcatcatcgtctcGGGAAGATTCCATGGATTTATTATCGTTTcgtgaaaattattattgtcaagGAGATGTGGCAACTGCGGATGGCAAATTGTATACATCATCAGTATCACGTTATCCCGAATTCCATTTGGCTTTTCCTTTATCTAAATCTTTGATGGAATCTAACAGTATCGGTAGTGGCACAGCAACATCATCTTCCTTCCCCCTAgccaccaccacctccaccGCCACCTATATTTCTACCCCTTCTAATCAATATGCTCGCattcaacatcatcatcaacagcagcagcagcatgcGGTCGGAAATATTGAGGTTGGATTGTTTGGTAGTGGGGCTAGCAATGGCGGAGGGggattttctaataatttttttcactcGTCTTTTTCGGAAATTTATGAATCGTTTCAACAACAACGAAATACCGCACCACTATTAATTCAACCTACTGCCACTAGTGGTGGATGCGTTGACAATCATTTTCCCACCACTGCTGCTGTTTCTACGGGTGCCACGCCCATTTCGATGAACAACAGTCAGCCGCCAGCCTATACGTCGTTTCCGTTTGAAGAAAATCATCCGTTCACGAAAAATATCTTTGCGAGCAACGGTGGTGACACTCCCACTTTATCTACGCCCCCCACCACTACcaacaacaataatagtaataattcatcgaaattgaaatcattttgcgatttattaaaaaataatggtTATCATTATATAGATTATGATGGCAGTAATGATGGAGCGCtagttaataattattcaattaatacTTTTGACGAGGCAGAGGAGGAGGCAAGGAAAGAGGACGATAGCAATTCACTGATATTGAATGGTGCTAATAATTTACGTGGAACGGATGGAGATGAAAACTTTggtgaaattattaaaaaatcgaTTGTAGAAACAGATGGATTTTGTATTAACTAA
- Protein Sequence
- MSSSSDNLTMLNFETNQQNTNDSSLNLDLHQRTSTELMGIIVPVDDNHHHNSNTDRSEDGSDSGLGSELILEEHEITITGSTNVMTSPSPNSSTSSNEMIDDLLNEVGEQQQQHNNKKVVDIMEVPLLDGGTPNNVIRKQQQQQKQSILKSTNRNRKRKLSLSTSTMMEDDVTAEDDDEQPLSKKKRHVSFSDITVFYFPRMQGFTCVPSKGGSTLGMAPHHHQMKTFSLSEHAIEQKKLHRLQILQQQMENGQQQQPDGSLSPAIMEITSDDTTAPPSSGMSSEDDFTVQNQVDDCDPDDSGVAVGEDSSDETATSEESEIEDLDENCYYFLQPVSIKQRRALLRASGIRKIDSYEKAECETIRTSREFCGCACKGYCDPDSCSCSQAGIKCQVDRSNFPCGCTSRDNCGNTSGRIEFNPIGVRTHFIHTLMRLDLEKKQNDEEEDDGRNERMLRRRDRHQRQLRFGAVQEDGVVQQQQQQQFLTNDDGWLHSSSTTTSLGSNDLPPTSSSSSSREDSMDLLSFRENYYCQGDVATADGKLYTSSVSRYPEFHLAFPLSKSLMESNSIGSGTATSSSFPLATTTSTATYISTPSNQYARIQHHHQQQQQHAVGNIEVGLFGSGASNGGGGFSNNFFHSSFSEIYESFQQQRNTAPLLIQPTATSGGCVDNHFPTTAAVSTGATPISMNNSQPPAYTSFPFEENHPFTKNIFASNGGDTPTLSTPPTTTNNNNSNNSSKLKSFCDLLKNNGYHYIDYDGSNDGALVNNYSINTFDEAEEEARKEDDSNSLILNGANNLRGTDGDENFGEIIKKSIVETDGFCIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -