Pcyl011972.1
Basic Information
- Insect
- Platypus cylindrus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_949748235.1
- Location
- OX456492.1:6055743-6059272[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.8e-15 8.4e-12 45.0 0.1 3 44 583 624 581 626 0.95
Sequence Information
- Coding Sequence
- ATGATGTCTGTGGGGCCTAAAATGGATGGTGGACCATGCCTAAACTTCTTCGATTCGTCAGAAACCTTAAATGCCTTGGAAGGTGTGAAAAGCTGGCTTCAAAAGAACGCCAAAAAGtatGTTACCGATTCATTGACCAACAAAACAATCTCTCAAACTGTAGTGCAACTATTACATTCCCAAGAGGAGTATTTAGGGAAGAAAGCTCAAAAGCCTCCAATGACTAGAATACCTgttaaatattttttcgatTTCAAACCTGGTGGTGGATTATGTCAAATTTTAGTTGCATTTTTCAAATGTAAAGCTGACCATAATTGTCGTAAGAATCCATCAAAGGATAAAATAGTGGATACACTccaatttatagaaaaatcaTTAATACAAAGTAAATTCTATATTCTTCCTATAGTTTGCATAAATCAAAATGTTGATAAAGCAGTTagtcaaaaaattaaagaaattgtaAGGAAACGAAATGGTCAAATAACTGAATCGGAAGAAGCTGCTacacatattttatataatccTGCTGATCCACCTGTTGAGGAATATGGACGACCAGTAATAAGACGAGACAAATTAGTTTTGATGCATTGGTATTATTTTCCTGATTCATTTGATACCTGGGTCAATTCAGATTCAATTGCATTGGATGGAATGGCTATCGATAGTCCCAGTCCACATACCGGTCCGTGGCGTGTAACATACACATGGATTTTCGATACAGATCAGTATAACGAATGGATGTCTGAAGAGGATTATGAAGTTGATGAAACTGGAAGGAAACGAATTCATCCAAGATTAATGTCTGTTGAAGATCTGATGAATCCATCAGAggatagaaataaaaaaagacgTGAAAGCAAAAGAAAGAGGTCACCTTCACCTCCATCAAAGATTGCGAAACGAAAAAGTGGAAGAAGTCCAGCTATTGGCAAAAAGAATAGTAAAGATGAAGAATGTGAAGATTTAACAAAAGACATGGAAGATCCAATACCTGAACCAAATATTGTTGAAGTGACACCTTCACCTAATAGCCAGCCATCAAATAAAAAAGACCATGATTTACAACCACTGAAAGGTGGTTCTATTACCGATTTAGAAGAACCAGAAGACAAAACGGAAGAAAACTCGCAAACTGgtaaaacagaaaataatatacaagACGATAGTCAAGAAGACAATGTTACTGAGCAAACGCATCATATTATTGTTCCCTCTTACTCGGCTTGGTTTGATTACAATTCGATtcatgaaattgaaaaacgaGCCATGCCAGAATTTTTTAATGCtagaaataaatcaaaaactCCAGAAATTTATCTCGCATATAGgaaTTTTATGGTAGATACATATAGATTAAATCCTACGGAATATATAACTAGTACAGCATGTAGAAGAAATTTAGCTGGTGATGTTTGCGCTATAATGCGAGTTCACGCATTTTTGGAACAATGGGGCCTAATCAATTACCAAGTAGATACTGATTGTCGGCCAACACCTATGGGTCCACCTCCTACTTCCCATTTTCATATATTGTCGGATACTCCATCAGGTTTACAACCTGTTAATCCGCCTAAAACTCCTCAACCAAGTGCAGCTAGAACATTACTAGATTTAGACAAACCTCAAGATAAAAAACCTGAAGGATTTGAACCATTAACTAGTTTTGGCTTGAAATTAGATCAGTACTCCAAAAAACCGGCAGTTCTCAGAAATAAAACAGCTGCATCATTAACTCGAGACTGGACGGAACAAGAAACTCTTCTGCTTTTGGAAGGTTTAGAAATGTATAAAGATGATTGGAATAAAGTTTGTGAACATGTTGGTTCTCGTACTCAGGATGAGTGTATACTACATTTTCTGCGTTTACCTATTGAAGATCCGTATCTTGAAGATCCTGAAGCGGGAGGTGCGTTAGGTCCATTGGCTTACCAACCAATTCCGTTTAGTAAAGCTGGAAATCCAATCATGTCTACTGTAGCTTTCTTGGCTTCAATAGTTGATCCAAGAGTTGCTGCTGCAGCTGCCAAATCTGCTATGAATGAATTTGCAACTATTAAAGATGAAGTTCCAGCTTCAGTAATGGATGCACATTTAAAGAATGTTGAAGCTTCATCTGCCGAAGGCAAATATGACCCAGCAGCGAATTTGGCTTTAACTGGAATAGCGGGTACTACCccagaaaaagaagaagaagataaaTTGAAGAAAGCGGAAAAAGACAATGAAAAATTGAACGATGAACAGAAGAAAAATGGCGAAGTTCAAGAAGAGAAATGTGAAAAAGTTAAATCTGAACCAGAGGCAGATAAAGACGAGAAGATGGATGCTGCAGATATAAAAACTGAAAGAATTGTGAAAGATAGTGAAATGCAAAGTGCAGCTGCGGCTGCCTTGGCTGCGGCAGCAGTAAAAGCTAAACATTTAGCTGCCGTAGAGGAGCGAAAGATTAAATCTCTCGTTGCATTACTAGTTGAGACACAAAtgaagaaattagaaattaaattacgcCATTTCGAGGAGTTAGAAACAACAATGGAACGTGAACGTGAAGGACTTGAATATCAAAGACAACAGTTAATCACTGAAAGACAACAGTTCCATTTAGAACAGTTAAAGGCGGCTGAATTTAGAGCTAGGCAACAAGCTCATCAAAGATTACAAATAGAACAAGGGCAATGGTCAAGTCAACAAATTCCTTCATCAGGCCAAAGTGTTGGCTCAAATTCAAGTGACACTGGAGCAAGTACTACGCCTACCCCTCCTTCACCACAAGCATCAGCTGTATCATCACCACAGGCTTCCTCCCACCACCACATAGGGGACGGTCAAGATAGTGAGTGA
- Protein Sequence
- MMSVGPKMDGGPCLNFFDSSETLNALEGVKSWLQKNAKKYVTDSLTNKTISQTVVQLLHSQEEYLGKKAQKPPMTRIPVKYFFDFKPGGGLCQILVAFFKCKADHNCRKNPSKDKIVDTLQFIEKSLIQSKFYILPIVCINQNVDKAVSQKIKEIVRKRNGQITESEEAATHILYNPADPPVEEYGRPVIRRDKLVLMHWYYFPDSFDTWVNSDSIALDGMAIDSPSPHTGPWRVTYTWIFDTDQYNEWMSEEDYEVDETGRKRIHPRLMSVEDLMNPSEDRNKKRRESKRKRSPSPPSKIAKRKSGRSPAIGKKNSKDEECEDLTKDMEDPIPEPNIVEVTPSPNSQPSNKKDHDLQPLKGGSITDLEEPEDKTEENSQTGKTENNIQDDSQEDNVTEQTHHIIVPSYSAWFDYNSIHEIEKRAMPEFFNARNKSKTPEIYLAYRNFMVDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTDCRPTPMGPPPTSHFHILSDTPSGLQPVNPPKTPQPSAARTLLDLDKPQDKKPEGFEPLTSFGLKLDQYSKKPAVLRNKTAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFATIKDEVPASVMDAHLKNVEASSAEGKYDPAANLALTGIAGTTPEKEEEDKLKKAEKDNEKLNDEQKKNGEVQEEKCEKVKSEPEADKDEKMDAADIKTERIVKDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQIEQGQWSSQQIPSSGQSVGSNSSDTGASTTPTPPSPQASAVSSPQASSHHHIGDGQDSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121544;
- 90% Identity
- -
- 80% Identity
- -