Pcyl012694.1
Basic Information
- Insect
- Platypus cylindrus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949748235.1
- Location
- OX456493.1:815858-831469[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-17 1.2e-14 53.6 0.0 1 45 477 522 477 522 0.95 2 2 1.8e-18 2.2e-15 56.0 0.0 1 43 872 915 872 917 0.94
Sequence Information
- Coding Sequence
- atggcggAGTGTTTATACGGGAAATGTGCACAACAACggaaaaatattagaaaagaATTGCAGCGATGGACAAAAAATATGGTTCATATTGTTGGCTTAGAACGCATTGCTGAAGAGTTGATGGGTCGGAGGAAATGGAAAATCTACCAGGAATCCATGTCAAAGAATTATTTGgaaccattattattaaacaacaatataaacaaacaacagcaacaacaacaacaacatacATCAACAACATTAAGAAATATCAATCGACTGTTAGTAACGGAAAACGAAGACGAATATTTttcaacaaaagaaaaaaccaGTCCGCATCCATTATTGCCTATTGGCAGTCCAAGAAACAGTCAAATAATCGAAGAGACattgaaaaaagaagaagaagagaacGACGGAGAGAAGAAATCGGCGTCCACCGCATTGTCGGTGGTCGCCGCCGTCAACGTCGTCGCCGCCGCCGACGGCGACATCGAGGCTTCGGAATTTGATTGGAAACCTCAAAACAAGTGCGTATTCTGTTCAGCAGAAGAGAAAAAGGAGGTGGTggaggaagaagaagaagaagacgaagaagaaaaGGGGAAGGGTGAAGAAAAAGCAAGAGGGACGAGGCGGTGCGGAAAATTAGATAGTGAAGATATAGGACGGGAACTGTACGAGGTATTACTGaGTCCACGTAATTCAGATACATCGGATTCATTGGAaagttgtggtggtggtggtggtggtgaacGTATTAGTGGCGACGACGGTGACGGTGGTGGTGTTCGCCAATTGTCCATATCGCCCATATCATTATCGCCATCTTCACAAACGCCCTCCTCccaacaattttatcattcAGCTCTatcacatcatcatcatcatcatactGCACATAGTATGTCTTCAGTTGATGTTGCGGCATTAGCTGTTGCCGCCCTAACAGGTGGTGGCCccagtggtggtggtggtggattgTTAGCTCGAGCTGTACATCCAGGAGGTAGTAGCAACGTAATCACCACAGGCATTAAtaccactactactactaataCTACCACAACCACCACACATTTACCATTGTATACTTCCAGTATGTTTGCGCATAATTGGTACTTGGCCAGCGTGGCGCGACAATTACAAAATGCCGAATTAATCgagaaaaattgtaataacAATACGGGCAGCGGCAGTTTAATCGGTAATGGAGGAGGTGATCAACCATTAGATCTCAGTAAAGGatcaaataataacaatagtaGTAGCAGTAATAATTGTAACAATCATCACCATGCGACCGTAAATAATTCGTTAGAATCTAAAGCGACaacggcagcagcagcagcagcagcgcaAAATCGCCTTCCAACATTGGATAATCAACAGCAAATATTTAAAGCGAAACCTCGAATGTCGGCAGTGGCCGGTCGCCGAACATATACGGAAGATGAACTACAAGCGGCCCTACGTGATATTCAATCAGGTAAATTGGGAACAAGAAGAGCGGCAGTGATTTATGGAATACCACGATCAACATTAAGAAATAAAGTGTACAAGTTGGCATTAGAAAAGGAACGTGAAACGATCCATTTGGTAAACAGTTCATCATCAGCGGCAACCACATTGAAACTGGATGAGGACGAAGCGATGGATGAAGATAAAGAATTATCGGGAGCGGAAGAGGAGAAGGAAGTCGAAAAAGCTTTACAGGCTCCGCTACTCTCTATGGCGGACATTTATcgaatttcgaatagtttaGGACACAGTCCAGATgctttgaaatatttttttcaaaaaatacgagaaaatCCTGATGGGCAAAATGacattattaattactttCATTCCTTGATCGCATCCAAAGAATTATTGAAACTACCCGAAGGATTATCAGTATTAAATCGATCGATACCACCagatttattaaagaaattgaACGAAGACAAAACACTACTacaaaataatgggaaaactgATCGAATTATGATGATGAGgccaaatttattaaattcgGTGGAGAAATTAAAATCGTCAGAATCGTCGGATACCGAGGAGCCCACCTCAAATGTGATACTTAAAATTCCGTCCTTCAAaccaacatcatcatcatcatctacaaacaacaacaacaacaacaataataataataataaaaatggatgcgatcttttatatagaaataacTCCCTCGATTGTTCCCCTCCCCCACCACCAGCGGCGGTGAACACGACAAACTGCTCAAATTCATCATCCATTTTATCATCGGACAAAGGCCTCTTGATCGCTGAATCGTTTTCGCATAAAATTGGTCAAAAATTTCAACAAACCCTTGAACAACCCCAACTAACACCGCCCATAAGGAGATCAATAGATTTAGAATTTAAAGGAACCggtagtagtggtggtggtggtggtggtggattCACGCCGCCATTGGCTAATAGTGGTGGTGGCAGTGCCAGTTTACTATCGCCATCCGTAATTAATATTCCACAAGAAGCTAGTAGACAGTACCAACAACATACTAAAGTACCAAATAGTATTGGAGCAGTTGGTGGTGGAATTGGAGCAGGAGGTGGCGGTGGAAAAGGTACAAGACCAAAACGTGGAAAGTATCGAAACTACGATCGAGACAGTTTAGTGGAAGCTGTGAGAGCGGTGCAACGTGGTGAAATGTCAGTACATCGTGCTGGCAGTTACTATGGCGTTCCGCATTCAACACTCGAATATAAAGTGAAAGAAAGACATTTAATGCGTCCGAGGAAAAGGGATCCGAAACCGAATCCGGTCGATGAGAAAATTGCCAGTTTAAAGCAAAATGACCTCAAAATGGCTCAGGAAAAGTTAAAACAAAGCGCCAGCGCCATTAAACCACCGCCATCACTAACTCAATCATCATCGACTCAAAAGTTTTCCGCCGCAACAGCAGCATCACCTAACGGTATGAAACTGCCGATTTTCGAGTCGCCGACCAGTGCAATTTCCGCAACAAACAACTATTCAACAGCACCACCGCCACCATTTCCATTTTGGCATCATCCAGCcatttcatcaaatcctattGAATACGTAACGGCAGCAGTAACGCGAAATCCAACTACATCACCATTCATAACGGCTGCGGCGGCCGCCGCGGCTGCAGCAGCTGCGGCCGCAGCGAATTCCGAAATATACGCTGCGTCACATCAAATGATACAGAAAATACAAGAGGATACGAAAAATAGTACGCCTATATCGCCAACATCATCACGATTACCAGGTGGTGTGAATACAGTTGCTACACTAGCGAAAAGTACCAGACAAATAGCGGAATCGTTATTGGATAGTCCCGGATCTAATGGCTCATTTCTGGACGGAATTATTCGTTCGAGTCTCGAATCCGGTGTGCCGCCCGTTGAtgaaaaatcatttaataagGAGGATAAAAATGTGGCCCCCGAAAATATGTCAAATAAAGCGCTATTGGATCAGTTATGTCGAAATAGTAGAATAACACCGTTATCAAAAGACTGTGGCAATAATAGTTCGAGTGATGAATCATCATTCAAACGAAGCAGCAGTAGTCCATTGAATTTTTCAACAGCAAGCAAAGATGGATCATTGAAATGTCAAAACAGTACCATGGAAATGGCGCATAATACCATTGAAATTTCCAATGATTCGGATGATGGCGATGCTGACGATGACGATGACGACGATGACATTGAAGATGACATTGACGATGAAGACGCTGATAATaaggaaagaagaaaaaaaagcaatgaaaatgGCGATGCTGCGTCCCTTTCAccgcagcagcagcagcagcaagaACGATTGCATCCACCTCCGCGCATCTATTTGAAGCCGGAATTGGCGAAACCGGAGAATTTGAAACCGGAAATGCTGGTTCGGTTTAGAACAGAAATCCTGTCAGATAGAAATGGCGGTAGTGCAGAAAATCAAATAACAGCAGCATTCACAGCAGCTcaacatgatgatgatgcatCTGATAGTGATGCACCGCACGACTGA
- Protein Sequence
- MAECLYGKCAQQRKNIRKELQRWTKNMVHIVGLERIAEELMGRRKWKIYQESMSKNYLEPLLLNNNINKQQQQQQQHTSTTLRNINRLLVTENEDEYFSTKEKTSPHPLLPIGSPRNSQIIEETLKKEEEENDGEKKSASTALSVVAAVNVVAAADGDIEASEFDWKPQNKCVFCSAEEKKEVVEEEEEEDEEEKGKGEEKARGTRRCGKLDSEDIGRELYEVLLSPRNSDTSDSLESCGGGGGGERISGDDGDGGGVRQLSISPISLSPSSQTPSSQQFYHSALSHHHHHHTAHSMSSVDVAALAVAALTGGGPSGGGGGLLARAVHPGGSSNVITTGINTTTTTNTTTTTTHLPLYTSSMFAHNWYLASVARQLQNAELIEKNCNNNTGSGSLIGNGGGDQPLDLSKGSNNNNSSSSNNCNNHHHATVNNSLESKATTAAAAAAAQNRLPTLDNQQQIFKAKPRMSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALEKERETIHLVNSSSSAATTLKLDEDEAMDEDKELSGAEEEKEVEKALQAPLLSMADIYRISNSLGHSPDALKYFFQKIRENPDGQNDIINYFHSLIASKELLKLPEGLSVLNRSIPPDLLKKLNEDKTLLQNNGKTDRIMMMRPNLLNSVEKLKSSESSDTEEPTSNVILKIPSFKPTSSSSSTNNNNNNNNNNNKNGCDLLYRNNSLDCSPPPPPAAVNTTNCSNSSSILSSDKGLLIAESFSHKIGQKFQQTLEQPQLTPPIRRSIDLEFKGTGSSGGGGGGGFTPPLANSGGGSASLLSPSVINIPQEASRQYQQHTKVPNSIGAVGGGIGAGGGGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLKMAQEKLKQSASAIKPPPSLTQSSSTQKFSAATAASPNGMKLPIFESPTSAISATNNYSTAPPPPFPFWHHPAISSNPIEYVTAAVTRNPTTSPFITAAAAAAAAAAAAAANSEIYAASHQMIQKIQEDTKNSTPISPTSSRLPGGVNTVATLAKSTRQIAESLLDSPGSNGSFLDGIIRSSLESGVPPVDEKSFNKEDKNVAPENMSNKALLDQLCRNSRITPLSKDCGNNSSSDESSFKRSSSSPLNFSTASKDGSLKCQNSTMEMAHNTIEISNDSDDGDADDDDDDDDIEDDIDDEDADNKERRKKSNENGDAASLSPQQQQQQERLHPPPRIYLKPELAKPENLKPEMLVRFRTEILSDRNGGSAENQITAAFTAAQHDDDASDSDAPHD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -