Pcyl003056.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Platypus cylindrus
Gene Symbol
JARID2
Assembly
GCA_949748235.1
Location
OX456488.1:27584057-27591382[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-21 2.7e-18 66.1 0.0 8 89 1504 1583 1499 1583 0.93

Sequence Information

Coding Sequence
ATGAAACGTAGACGAAAGGAAAACTGTGTTTCACCGATTTTGGACGACATCCCAAAGAGAATTAAAGTACAAGCACAAAGGAAATTCGCACAGAACTCCGGTATTCACAATCCAATTATAAGTCCAATCAGAGATTTAGAGCATACTGATTTATTACCAAATACTACCAATGAGACTCCAGAGCCGATAGAACTTTTGCCAATGAAACGTCCTAATACTGAAGATTTTGTAACATTTCTGTGTTATCGTGGTACGCCAGTTTTGCCACaacatttacaatttttcaatACAGCATCGATTGTTACTGACGGACAAGTGCATGAAATTAAAGGAGATTCACCAAAAAATGGTCCAATCGATATTACGAAATGTGTTAGTGGATCTTCCGAGAAACCATTTATAGCATTTGGTGTACGAAAAAGAGCCGATCCAGTGGTTATCAAAAAACAAATGGAAAAGAAACGCCGTCATGCACGCGTTATTCAGGCGTTACGAAGAGGATATCAACAACAAAAGATGGCAAAAATTCGCGCATTTACGATAAGTAAATTAAGCGAGAAAACAACCAATAAAACCATGGTAAAAACAAACACATTTCAAAAAACTGAAACTGTAACGAAAAAAACGGATACTTTACAAAAAACTAAAGTAGTGGCAACTAAACATATCAAAGTCACTACTGAAACATTGAAAACTTCTTTGAAGCCAAAAATGAAGCCGAGGATGTGTTTGAGAAGTTTCAGAGGAAAATTTGTACACAAAGAACTGCcgtttaaagcaaaaaaattcgTATCAGAAAATGAAGATGTTGGTAAAAAGAAATCGGAGAACATTGGTAAAAGTCCACCtgaagaaaaaattgatagcAGTAAATCAGTAATAGGCTATTCAACAATAACATCGCGCAAAATGTTAAATGAAACGAGTAGTGAATCAAATACGAAAAACAATAACAGTGACAGGATGACGCGTTCTGCTATGGGTGAAGGCGTGCGTTCATCGAACACTAGAGCTAATGTACAGAGAGCTCAATTGAAGAGGCGAATCTTGATACCAACAACTTCGTCAACAACTACAAGTTCAGTTGTTGTTAAACCAAAACTCAGATCTACAACATTAAAAAAGACAATTATATCGCGAAGAAAAGCTCAACAACGCTTACGTTCTACtgttgtaaaacaaaaaaatgaaaaatcggTAGTGAAAACTAACAATGCATCAACGGATACGTCTAATGAACAAAACAATTCGTCAAATGATGTTATTCGTAAGACAACAGAAATTACGAAGAAAGCAAACGATAACAATGTAAAGAGGGAATGTAAAAAGGGGGATTCTAAGAGAAAACTGAGACAAGGGCAGTCTATGATTCCTAAACGCATCACCAGAAATTTTTCTGAGAAAATTGCAAATGAAAATGTTATAAAGAAAGAATTCACGAAAAATGTTGAGTTAAAAAAAGAGGTTAAAATTGCGGAAAcaagtaataaaaaagaaataaaaaagaatagtaatttaaaaaaggaaCTAAACTTAAAAACAAATGAGAAGGAAATCAAGAAAAATGTCGACGTGAGAAAAGTACTGGATTCAATTTTGGAGAAAAACGAGAATGGtgtaaaaattacaaaagaaaGTAAAACAGTTGAAGTTACTATAAAGAAAATTCTTGCTAGAAAAACTCGAGAGAAAAGTGCTTTGGCAACCTTGAAAGATGATAATAAACAAGATGAAAAGAAACCACCATCACCACAATTACTACTATTGTCGGATGACAAAGAAACTGAACAGGATATTGTTAAAAAGTCAAAAAATCAAGTACTAGAAATCAAACTGAAAGATATTGTTAAAAATCCATCAACtttgaaagaaaaatcacCTGATatggaaataataaatgtcGAAGACAGTTCACCGACTGATGAAAAACTTACGAAAGGCCTTTCATCAAAAGAGATCCCAATTAAGAAAAAGTTATTAACAAATAGCAAGAAGGAAGTACTGAAAAGAActaaagaagaagaacaaaCACGGGAAGATGAACCGACGCAACGATCGATAACAAGAccaacaaggaaaacaaaagaGGCAGCAACACTTTATATGGAAATTTTAAGTCATAAACTTGTCAGTGATAATCATAGTGACGATGACAATGTTTCCATTGATAGTTTTCCTGAATTACCAAATGTTAAACGAACAGAACAACGTGAGAATGAACTAAGAGCGAAGGCTAGCAGTAGTAGAGCAGTGAAAGAAAAAGCTCAGAAACCAGCAGTCGAAATCGATgctgataaaaaaaagaaaatcagaAAGATGGTTAGTGAGAAGGAGGACGATAAAGATGAACAATTAAGTATTATTTCGGTGAACTCTTCAGAAACATTTATAGAAGCCGTCGTTCAGAAAGGCGTCACGAAGCAAGTAAATGAGAAACCTGCTATTGAAATTGATAGTGGAAATAAATCAGTAGCAACGGAACAGTCTCCTAACAAGACCTCATCAACGTCGAGTCGAAAACGATCCTGTTCAGTGGAAATACTTTCAGATTCGGCATCGGACGATGAagtattgcaaaaaaaaattcaaaaaatcgTCACTGCTGTCACTAATATTGATGATGATAGTATGACTAGAAGGCAAACAAGACGTTCCACACAACAAATGATTCGAGACAATGCAAGTAATACTTCAGATGAGTCATTTCATGCTGACAAAtcatctacaaaaaaaaaagttacaaCAAGAAGTCCAAAGACCAATCAATCAAACAAATCGATGAATGTACTTGAAAAGAATGTTGATATTATTTTGGAGGCAGCTCGAGTACTGGAGGCTGAAACGCTTTCAGAGCAGGAGTcagaaattcaaaaaaatacgGACAATGAAGAATTGGTGGTGGATGGACATGGTGAAATGGATGTTGCTGATAAAGCAATGAAGAAAAATGACAAATCAATGGAAAAGAGCAAGTCGTATAACGAAAGTGATACAAACGAATCAAGTACATCAGACATTAATTTGAAGAGTCTGCAAGTAAAGCAAAAAAACAAGCAAAAGAATATGAAATCAAAAGTAGATCAAAGTTTCAGTGATTCTGATGAAGAGCCACTATCCCGATTAACATCTGGAAAAACTATGTTCACAGATCCAGAAAAATTGGTCTGCAAACGACCGAGTACGAGAAAAACAGCTGATCAGACTTTAGCACAAACTACTCCAGCGTCATTGGTTAACGAACCTAAACCGAAACGGGAGTGTACAAAAAGGCCTTCCAATTATCTTCCAATGTTGTCCAGTAGCGAAGaagatgatgacgatgatgatgatgagccATATTTTCATGGATTTAATACATCGAAAGTAGCTGCAGCAACATGTAGTATTCCTGCTAGTGTTACTGGAAGTACTGATTTAAAACACACAGTGTTACAAACACTAACTCcatctttaaatttattaagtaAAGATATTGGTAGAAAAGAAAAGGTCAATATGTCTAAGGAACAAATCGAGCAGTGGCTTAAAGATTCGGCGTTAGCTGGAACAGGTGTGGCTAAAGAGAACGATGCTATGCTGAAATTTGGCGAACGAATACCGGCTGAATTACCGATTGTTGATATAAAGATAGTTGAAGTTGAGTCGATAGTAAAGCCATCGATTAAAGATGACGAAGAAAAGTCTCCGAGCAAAACCATTGAAGAGAAACCACCGAAAAGTGAAACAAAGTCGCCGCTTAGTGATCGTAAATTGATTTTCAAAAAGGATAAGAAAGACGTAACACCAAATAAAAATGCTTTCTCACCAGATAACGAGTGCAGTGTGTATGCTTTTGGTGAAGATAGTGAAGATGCAATTTGTACACCATTTAGAAGACCTTCGAGAAGACCATCTAGTACAGCAACATCTAGATCTGAAGAAGATTTACCAAAAACCGAAGAAGTTACGAAACAGAATCAATTTCGCAAGCCTTTAGAATCACCTGAAGATTCTCGCTGCTTTAACATACCACAGAACCCAGCTAAATGTTCAAAAAATGTTAAACACGAAACTATGGTACCGCCATCATCTAGTTTTCATGGCAAGAAGCCTTCAAAgttatttgataaatttccGGAACCATTTGacgataataaatataaaatacctAGTTCACCAAGTGCTAGTAGTGGTAGCAGTACCAAATTATATAAACGGGCATATAATAAACAAAAGGGGAAAGTGACCGAAATTAAACCAGTTTTTGTTACTGAATTTCCTAAACCGACTGATCCAGCAAAATTAGTTGAGGCACCAGTATTTCATCCAACAGAACAAGAATTCCAGGATCCACTCGAGTACATCGAACGAATTCGTCATAAAGCGGAACCATTTGGTATTTGTAGAATCATACCACCAAATAACTTCAAACCGGAATGTAAAGTGTCCGATGATATGCGTTTTACGGCATACAATCAATACGTTAATAAAATGTTACATCGATGGGGACCTAATTTCAAAGAATTTCtagcaattaaaaaatatttagcaacGCAAAATATCACATTAAAAACACCACCATTAATTGGTGGAATGGAAATCGATTTGCCTAGATTGTATCAAACAGTACAAGGACTTGGTGGTCTTAAAGAAGTAATAGAGAAGAAGAAATGGTCCCGTGTATCTGATAATATGAAAATACCAAAATCTGCTCAGGATCGAGTTACAAAACTAGACgatatttattgtaaatatcTATTACCATATGATACACTATCGCCTATTGAACGGGAAAGGCTTTTTGATGAAGTGGAAGCAAATTGGACTAAAAGACAAAATCCAAATACTTCCGATATAAAAGTGGAAACAAAAGTCGATGACGATGGTGGATCGGGAGGTGAAGATGGCGATggtgatgacgatgatgaagAAGACGACGAGGAAGATGAATGTAcggtaaaaggaaaaaatatgGCATTGAATGCATTTTATCGAGTTGCCAGAAATACGATGGCTATGTATTTTAAAGTACCAGAACCAACAGCACATGAAgTGGAGCTTGAGTTTTGGCGATATGTAATTCAAAGGCAAAACCACATATGTGTGCATTCCGCATCGATTGACTGTGGCAATTGGGGCTATGGTTTTCCAGTAACGAAAAATAGTCCAATTGCTAAACATCCTTGGAACCTTAAAGTATTGAGTAACAATGTCATTTCAGTATTACGTTCTCTTGGGCCAGTAATGGGCGTTACAGTACCAACTCTTCATGTTGGAATGGTATTTAGTACCTGCTGTTGGTATCGTGATCCACATGGGTTACCATGGATTGAATATCTTCATACTGGCGGCAATAAAATTTGGTACGGTATACCAAATTCGTCATGTGATTTATTCCATTCGGCAATGCAAAAACTGGTACCAAATTATTGTCGTGATAAAGAACTATGGCTACCATCTGATACCGCTATGATACCACCAACATTACTTATGGAACATAATGTTTCATTATGTCGAACGGTACAAGAACCTGGTCAATTTCTAGTCGTATTCCCCAAAGTGTTTACATCCAGTATCAGTACAGGATATGTTGTATCGGAAAGTGTCTATTTTGCACCACTTTACTGGCTAAAGACCACTAAGAGTTTATTTAACGATTTGAAAACTAGCTGCGAACCATCAATGTTTTCATTAGATAAATTATTAGTCAGTATTTCTTTGGATAACCGATCTGCAGTAGAAGTATTAAAAGTTGTTCAACCTTTTATGGAAGAATTGTATAGGAAAGAGAAAAAACATAGAGAAACGCTAAAGAATTTAGGTGTAACACAGCGGGAACGGATTACCATTCCAGGACTTTAcagcaaaaagaaaagaattcAAAATGTGGAAGGAGATGATTATGAGTGTGAAGTTTGTAGAATGAATTTGTACTTGTCAATGATTATTGATACCCAGgaagatttaatttattgcttaGAAGATGCTATTGATGTTATCAACAAcgataaaaacgaaaaatgtcAGGAACGATATAAATTGCAATATACTCAAGATGAGAAGGAATTGGAATCGATTCCAAGTAAAATTACATCTTTAATTGATTCAAAAATGCAGAAAACAAATGGTTGA
Protein Sequence
MKRRRKENCVSPILDDIPKRIKVQAQRKFAQNSGIHNPIISPIRDLEHTDLLPNTTNETPEPIELLPMKRPNTEDFVTFLCYRGTPVLPQHLQFFNTASIVTDGQVHEIKGDSPKNGPIDITKCVSGSSEKPFIAFGVRKRADPVVIKKQMEKKRRHARVIQALRRGYQQQKMAKIRAFTISKLSEKTTNKTMVKTNTFQKTETVTKKTDTLQKTKVVATKHIKVTTETLKTSLKPKMKPRMCLRSFRGKFVHKELPFKAKKFVSENEDVGKKKSENIGKSPPEEKIDSSKSVIGYSTITSRKMLNETSSESNTKNNNSDRMTRSAMGEGVRSSNTRANVQRAQLKRRILIPTTSSTTTSSVVVKPKLRSTTLKKTIISRRKAQQRLRSTVVKQKNEKSVVKTNNASTDTSNEQNNSSNDVIRKTTEITKKANDNNVKRECKKGDSKRKLRQGQSMIPKRITRNFSEKIANENVIKKEFTKNVELKKEVKIAETSNKKEIKKNSNLKKELNLKTNEKEIKKNVDVRKVLDSILEKNENGVKITKESKTVEVTIKKILARKTREKSALATLKDDNKQDEKKPPSPQLLLLSDDKETEQDIVKKSKNQVLEIKLKDIVKNPSTLKEKSPDMEIINVEDSSPTDEKLTKGLSSKEIPIKKKLLTNSKKEVLKRTKEEEQTREDEPTQRSITRPTRKTKEAATLYMEILSHKLVSDNHSDDDNVSIDSFPELPNVKRTEQRENELRAKASSSRAVKEKAQKPAVEIDADKKKKIRKMVSEKEDDKDEQLSIISVNSSETFIEAVVQKGVTKQVNEKPAIEIDSGNKSVATEQSPNKTSSTSSRKRSCSVEILSDSASDDEVLQKKIQKIVTAVTNIDDDSMTRRQTRRSTQQMIRDNASNTSDESFHADKSSTKKKVTTRSPKTNQSNKSMNVLEKNVDIILEAARVLEAETLSEQESEIQKNTDNEELVVDGHGEMDVADKAMKKNDKSMEKSKSYNESDTNESSTSDINLKSLQVKQKNKQKNMKSKVDQSFSDSDEEPLSRLTSGKTMFTDPEKLVCKRPSTRKTADQTLAQTTPASLVNEPKPKRECTKRPSNYLPMLSSSEEDDDDDDDEPYFHGFNTSKVAAATCSIPASVTGSTDLKHTVLQTLTPSLNLLSKDIGRKEKVNMSKEQIEQWLKDSALAGTGVAKENDAMLKFGERIPAELPIVDIKIVEVESIVKPSIKDDEEKSPSKTIEEKPPKSETKSPLSDRKLIFKKDKKDVTPNKNAFSPDNECSVYAFGEDSEDAICTPFRRPSRRPSSTATSRSEEDLPKTEEVTKQNQFRKPLESPEDSRCFNIPQNPAKCSKNVKHETMVPPSSSFHGKKPSKLFDKFPEPFDDNKYKIPSSPSASSGSSTKLYKRAYNKQKGKVTEIKPVFVTEFPKPTDPAKLVEAPVFHPTEQEFQDPLEYIERIRHKAEPFGICRIIPPNNFKPECKVSDDMRFTAYNQYVNKMLHRWGPNFKEFLAIKKYLATQNITLKTPPLIGGMEIDLPRLYQTVQGLGGLKEVIEKKKWSRVSDNMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPIERERLFDEVEANWTKRQNPNTSDIKVETKVDDDGGSGGEDGDGDDDDEEDDEEDECTVKGKNMALNAFYRVARNTMAMYFKVPEPTAHEVELEFWRYVIQRQNHICVHSASIDCGNWGYGFPVTKNSPIAKHPWNLKVLSNNVISVLRSLGPVMGVTVPTLHVGMVFSTCCWYRDPHGLPWIEYLHTGGNKIWYGIPNSSCDLFHSAMQKLVPNYCRDKELWLPSDTAMIPPTLLMEHNVSLCRTVQEPGQFLVVFPKVFTSSISTGYVVSESVYFAPLYWLKTTKSLFNDLKTSCEPSMFSLDKLLVSISLDNRSAVEVLKVVQPFMEELYRKEKKHRETLKNLGVTQRERITIPGLYSKKKRIQNVEGDDYECEVCRMNLYLSMIIDTQEDLIYCLEDAIDVINNDKNEKCQERYKLQYTQDEKELESIPSKITSLIDSKMQKTNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-