Pcyl010600.1
Basic Information
- Insect
- Platypus cylindrus
- Gene Symbol
- ARID5B
- Assembly
- GCA_949748235.1
- Location
- OX456491.1:5734357-5752107[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6 1.6e+04 -3.7 0.0 33 46 218 231 217 232 0.81 2 2 5.2e-22 9.9e-19 67.5 0.0 1 89 329 415 329 415 0.93
Sequence Information
- Coding Sequence
- atggatttatatGATGTACAgTTAATTGGAAGTCCTTGTGGTCTTCACGGACCCTACACGTTCTATAAAGCATTTAAATATTCGAAACATAATATAAAACGTATTATAACATTGAATGAATTCTTCTTTGTGAAAATGTGGCGAGATTCGGATTTACTAAATATTGGCGAATTACAATTATTGTGGTTCGATAAAAATAGCGAACAAATTTTAACGAGTTTACGTTTGTATTTTTTACCCGAAAATACACCAGAAGGGCGAATGGATCATGGCGAGGACGAGGTTCTAGCAATATCCGAAAAAGTTATAATACGTTTAGAAGATCTTATTACATGGATTACAGTTGAAGCTGAATGGAATTGGGGACGTTTAGCTAAATGTGAAGCTGATCTTCAGCGGcgacagcagcagcaacaaacAATAACTACAATAGCAACGCCAGAAAATTATACATCGCCGCCACGTAAAGTAACTGGATCATCATTTAGTTTAGCGGAAAATATTTTGGATTTTTCCGATGTGgaacaagaaaaacaacatTTAGAACCATTAGTGGAAAATGATGATAAGGAACCTCACGTAATCATTCTCAGCTATCCAAAGTATTGCCGCTATAGGGCAATGATGAAACGACTGGAAGGCGTTGAAGATATTTATCTAAGATATAAAATTGTTAACAGTCTAGGTGGATTTTATGTGAAATATCCTAATACAAGGGTATTATTCTGTCGAGACAATTTCGATTATCCAGAATTGGAAGGTCACGAATTACTTTGTAATCATTTAGCGCCAAAATTAAAAGGTCGTCCGCGTGGTAAACGGAAAAAACGCAGCATCTCACCTGGTTCAGAAAGCAATGAATCTGAATCATCAGTTAGTAATCATTTTACCAGATCTTCCGAAAAAATCAACGGTATATGGCGTTCGGATTCACCAATGACAGTTGCAACACGTCGCAGTACCAGATGCCACAATGATAACAATGAGAATAAAGAATTTATGAAAGGCTTAACGATTTTTATGAAATCGAAGCATATACCTTTTGGACGGGTTCCTTCATTGGGTTACAAAGAATTAAACCTACGTGAATTTTACATAAAAGTCCAAAAACTTGGCGGTTACGATTGCGTAACAACAAATCGTTTATGGAAATCAGTTTTCGACGATATGACGGGCCATTTAAATAGTACAAGTGCAGCAACAATAATTAGAAGACATTACGAAAGATTTCTATTAGCCTACGAACGACATGAAAAAGGTGAAGAATATAAACCATTGCCAATATCCGAGAGAAGACGTTTGCACAGGAAACGATCTAGTATGTGTTTAAGTGATGCGGAATCTAGTAATGATGCTGGTAGTAGTACACCAACATCATCGTCTAATACATCAAGAGCAGATAGTACACCACCAATAATAATTGAACAAAAGgATTCAGTTTCACCAGGTAAAACATCTTCATCATTAAGAAGCGTTCGAGTGAAAACAGAAAGGCAAAAAGAGAAACAAAACTCACTTAGTGATTATAATCCAATCCAGGgatcaacaacaacagcaacagcaacaacaattGCTCTAATGCCATCACTATCATCTTCACCACCTCTTgtccatcatcatcaacatcatcataataatcatcagCCAATTTCCCCTATTACTGTTTTGCCACtaaatgaaatgaaagaaaGTGTTAAAATTGAaccaatagataataaaagtTGTAGTGAAGTtgtaaataattcaattactTTGTCTAATAATCAATTAGAGGAGGAGAAAAAAGTGACAGTTGAAGTTAATGTTAAAGTTAAAGTTGAAACGGCAACACGACTGCTGGAAGACGATGATGAAATGGAagaatgtaaaattaaaaaagaaataattaaagtagaggacgaagaagaagaggaaaaTGCCGCTTCGCCATCAATGATGAGTgatgtaattaatataaatccatCAACGCCAGAAGGAACAAAAACtgatttatcaaataaaaccAATGAGCCTCTAACTACAGCTGTTGCTCCTGTTACATCAGTTCGAACAGAAAATGTTGTTCTATCACCGATTGAAGGTAAAGAAAATGTTCCGGTTACAGCCGCCAATGATGCTGAAATAATGACACCTGAAATTATCAAATTTCCATATAAAGTTAAAGCTCctgatataattaaaattgataatgaAGTTTATAGTAATTCATTCATTGAAgatgttaaaaaaataaacaaactggACATATTGAAAGAGGGTGGATTGGAAGTGACACCAGTTATTCATCATGCAGCCGTTTCAGTTAAAGAAATTCGCCCAACAGTTATACAACCAACGTCACATTTGAAGGTGTATAATCAACCAGAATTCTTTagtggtaataataataatgtatcaacaaaaaataataataaaaagccAGCACAAAGTGTCCAAATGAAAGCAACATGTTGTCGTCCATCGAATAAAACTAATCGTGATTATTTGCCATCATCACAATTTATGATCAATGGTATTGATCAACCACCAAAAGATGTACATCAATCTAAATCGATTTATACGTATTCAGAGAAAATTATTTACGGCAATCCAAAGGATTATTTACAACCGCCATTCATGAATTCGGAAACACCAAAGTTTATTGGAACAAGTCataaaaataatggcggcGGTCATCCAATCGATTTATCCGTAACCAGTCCACAGAAACCATTTTCTGCTTTATTAGAATTTACACGACTACCTCAAAGTACTAATAGCAACAATATAAATTCTGTAAAGGCACATAGTAATACaatttataatagaaataatgtCAGTAGgaatttatataaaacttCTACGTCATTATCGTCATCATCAGCTCAATTACCACCAATAATGATAGATGGTAAACGAAAGTTGAGTGCAAATTTAGAAATTACATTAGTAAATCCGCAACAGAaagatcatcatcatcatcataattcTCATTTGTTGtcaaaaacaacaacagcagcagcaacaaggACAACGCCATCGAGTTACGTTTCCAAACGAAACAGTTATAAACCATATAATATTTCAAGGATAAATGGTGAAGAAAATTCTAAGCAATATAACAAATACAACATTCCAGCATTAATacacaataataatcataGTAAGCCAAATGTAGAAATAACAGTTCATCCACCACCCAAAGTCAGTCATAGTTCCGCGAATAAAATGGACATGCGGCCACCAATGCAAAAACCTATTAGTGCACCACTGACACCTACGTTCCTTCCCACATTACCACCATCACTgcaaccaccaccactaccaccgtCATCAACGCTACCagcatcatcaacatcatcatctaCCGCTGTACCACATCCGAGTCAATTTCCCGGTTTGGAGGGAATTAATCCATTTTTAATGGATTCACTCTACTATCATGCGGCATTACAAAatgtttattcaaatttttccaATGTTCCCCCTTCACCGATCCCGCTACCTCTTCTCACTCCCGAACAATTGAAATATTTCTATACGGAGCTGCTGACGTCACATAGTGCTAATAGACATAATTTATCATATAATTCGCTTCCAacgaatattaataaaaaaccaTAA
- Protein Sequence
- MDLYDVQLIGSPCGLHGPYTFYKAFKYSKHNIKRIITLNEFFFVKMWRDSDLLNIGELQLLWFDKNSEQILTSLRLYFLPENTPEGRMDHGEDEVLAISEKVIIRLEDLITWITVEAEWNWGRLAKCEADLQRRQQQQQTITTIATPENYTSPPRKVTGSSFSLAENILDFSDVEQEKQHLEPLVENDDKEPHVIILSYPKYCRYRAMMKRLEGVEDIYLRYKIVNSLGGFYVKYPNTRVLFCRDNFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSISPGSESNESESSVSNHFTRSSEKINGIWRSDSPMTVATRRSTRCHNDNNENKEFMKGLTIFMKSKHIPFGRVPSLGYKELNLREFYIKVQKLGGYDCVTTNRLWKSVFDDMTGHLNSTSAATIIRRHYERFLLAYERHEKGEEYKPLPISERRRLHRKRSSMCLSDAESSNDAGSSTPTSSSNTSRADSTPPIIIEQKDSVSPGKTSSSLRSVRVKTERQKEKQNSLSDYNPIQGSTTTATATTIALMPSLSSSPPLVHHHQHHHNNHQPISPITVLPLNEMKESVKIEPIDNKSCSEVVNNSITLSNNQLEEEKKVTVEVNVKVKVETATRLLEDDDEMEECKIKKEIIKVEDEEEEENAASPSMMSDVININPSTPEGTKTDLSNKTNEPLTTAVAPVTSVRTENVVLSPIEGKENVPVTAANDAEIMTPEIIKFPYKVKAPDIIKIDNEVYSNSFIEDVKKINKLDILKEGGLEVTPVIHHAAVSVKEIRPTVIQPTSHLKVYNQPEFFSGNNNNVSTKNNNKKPAQSVQMKATCCRPSNKTNRDYLPSSQFMINGIDQPPKDVHQSKSIYTYSEKIIYGNPKDYLQPPFMNSETPKFIGTSHKNNGGGHPIDLSVTSPQKPFSALLEFTRLPQSTNSNNINSVKAHSNTIYNRNNVSRNLYKTSTSLSSSSAQLPPIMIDGKRKLSANLEITLVNPQQKDHHHHHNSHLLSKTTTAAATRTTPSSYVSKRNSYKPYNISRINGEENSKQYNKYNIPALIHNNNHSKPNVEITVHPPPKVSHSSANKMDMRPPMQKPISAPLTPTFLPTLPPSLQPPPLPPSSTLPASSTSSSTAVPHPSQFPGLEGINPFLMDSLYYHAALQNVYSNFSNVPPSPIPLPLLTPEQLKYFYTELLTSHSANRHNLSYNSLPTNINKKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -