Pcyl006018.1
Basic Information
- Insect
- Platypus cylindrus
- Gene Symbol
- Jra
- Assembly
- GCA_949748235.1
- Location
- OX456488.1:50987357-50988079[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-16 8.6e-14 51.2 9.6 4 63 151 210 148 212 0.93
Sequence Information
- Coding Sequence
- atgagTCAATTCAATGAAAATGCTAATAAGCCAAATGTGTCTACCTTGAAACGAAATCTGACGTTGGATTTTAATCAGGCAAAGAAAAACTTGGCATTTCCACTATCGACTGGAGAAGTACTTTCATCGCCagatttaatgaaattaaaagttGATACACCAGAATTGGAAAACATGATATTAGacAATCCCTTACCAAACACTCCAACGCCTTCAACATTCTCATTCCCTAAAAATGTGACAGCAGAACAAGAACGATTTGCTGGCGGTTTTGTGGAAGCACTAAGCAATTTACATAACAATTCCCAACAAGGTTCTGATAGTAATACAAGTACAGTATACAGCGAATCATCGTTTATACcacaaataaaagaagaacCGCAAATTGTACCAAATATCAGTAATTCACCACCAATGTCACCTGTTGACATGGAATATCAAGAACGAATGAAATTGGAAAGAAAACGACAACGGAATAGATTGGCAGCATCTAAGTGTCGTTCAAGAAAATTAGAGAGAATATCAAAACTGGAAGATAAAGTGAGAATGttgaaatcagaaaatgcggAACTTAGTTCTGTAGTGAATCAATTAAAAGAATCGGTTGGTTTATTAAAACTGGAAGTTATCAGTCATAATAAAGCTGGTTGTcaaataatgatttattaa
- Protein Sequence
- MSQFNENANKPNVSTLKRNLTLDFNQAKKNLAFPLSTGEVLSSPDLMKLKVDTPELENMILDNPLPNTPTPSTFSFPKNVTAEQERFAGGFVEALSNLHNNSQQGSDSNTSTVYSESSFIPQIKEEPQIVPNISNSPPMSPVDMEYQERMKLERKRQRNRLAASKCRSRKLERISKLEDKVRMLKSENAELSSVVNQLKESVGLLKLEVISHNKAGCQIMIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01106932;
- 90% Identity
- -
- 80% Identity
- -