Prob007516.1
Basic Information
- Insect
- Platygaster robiniae
- Gene Symbol
- grn
- Assembly
- GCA_028476575.1
- Location
- CM052024.1:25131538-25132348[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-18 1.8e-14 54.8 4.2 1 35 16 49 16 50 0.97 2 2 3.4 2.9e+04 -3.4 0.5 3 7 147 151 146 151 0.81
Sequence Information
- Coding Sequence
- ATGAATGGTAAATTTTTCAGTGCTGCCAGACGAGCGGGCACGAGCTGCGCCAACTGCAAAACGGTGACGACAACTTTGTGGCGGAGGAACCAAGCGGGCGAACCAGTTTGCAATGCTTGCGGGCTGTATTATAAACTCCACAATGTTTCGGGAAAAAGACCGTTTGTTCGTCATTGTTTCCTACAACACGTATCAAGAGCTTTGGCTGCTTCCGCGCTGCGGAAGTCGAGAGTTTGTCTTCTCACAAGCTTTTCTTTCCGGCCACGGGAAAATAATGGGGAGCCAAAACACAGAGCTCGAGGGCCTCTCTTGATGCCAACAGTGTACGTACACTTCCGGCGCTTCCTGTGTCACACGCAGTTGAGCACGCTCGACCCGAACGAAAAAGGGAGCTGCGTCGATGCAACTCTGCTTTTTTCAACAAATTGTCGCAGCTTCACATGCCACACTACATTAGTCACCATTGGGATTTGGGATGTAGAGAGTTGGGGGGATAGTTCGAGTAAAAATTAA
- Protein Sequence
- MNGKFFSAARRAGTSCANCKTVTTTLWRRNQAGEPVCNACGLYYKLHNVSGKRPFVRHCFLQHVSRALAASALRKSRVCLLTSFSFRPRENNGEPKHRARGPLLMPTVYVHFRRFLCHTQLSTLDPNEKGSCVDATLLFSTNCRSFTCHTTLVTIGIWDVESWGDSSSKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -