Basic Information

Insect: Platygaster robiniae
Gene Symbol: RREB1
Assembly: GCA_028476575.1
Location: CM052027.1:25828025-25837991[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.9 6.7e+02 2.9 4.6 1 23 282 305 282 305 0.95

2 10 0.082 29 7.2 0.3 1 19 429 447 429 449 0.96

3 10 0.022 7.9 9.0 0.2 1 23 562 584 562 584 0.98

4 10 0.02 6.9 9.2 2.3 1 23 593 615 593 615 0.98

5 10 0.044 15 8.1 8.1 1 23 621 644 621 644 0.97

6 10 0.0054 1.9 10.9 1.2 1 23 1002 1025 1002 1025 0.95

7 10 0.0037 1.3 11.4 0.4 2 23 1316 1337 1315 1337 0.97

8 10 0.0048 1.7 11.1 0.9 1 23 1415 1439 1415 1439 0.97

9 10 0.0082 2.9 10.3 0.3 2 23 1595 1616 1594 1616 0.95

10 10 0.0023 0.8 12.1 4.6 1 23 1622 1644 1622 1644 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.9	6.7e+02	2.9	4.6	1	23	282	305	282	305	0.95
2	10	0.082	29	7.2	0.3	1	19	429	447	429	449	0.96
3	10	0.022	7.9	9.0	0.2	1	23	562	584	562	584	0.98
4	10	0.02	6.9	9.2	2.3	1	23	593	615	593	615	0.98
5	10	0.044	15	8.1	8.1	1	23	621	644	621	644	0.97
6	10	0.0054	1.9	10.9	1.2	1	23	1002	1025	1002	1025	0.95
7	10	0.0037	1.3	11.4	0.4	2	23	1316	1337	1315	1337	0.97
8	10	0.0048	1.7	11.1	0.9	1	23	1415	1439	1415	1439	0.97
9	10	0.0082	2.9	10.3	0.3	2	23	1595	1616	1594	1616	0.95
10	10	0.0023	0.8	12.1	4.6	1	23	1622	1644	1622	1644	0.97

Sequence Information

Coding Sequence: ATGTGGAGTGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGGGGGGAAATTGTGGGCTTGTCTCTGCATCAAGATTTTCTCGATTTGTTTTGTTCCGTCCGTTTGTTTTTGGGTTTAGAGGCGGATACGCGAGAAATTTCTAGTCCGGGAAAAAGCGATCAGTCTCCCGAGAAAATCGAGGTGAAATGTGTTTGGGGGATAAATTTATCAGTTATAGGTATTTACACCTTGAGGGTGAGATTTTCCCGGAAGCTCGAGGAACGCGCGTTCATCGGCGTGTACGTGCATATCTACACATCTGCATATTCTACACGTCGCGATTCGTTGGCGAGCTTGCGTCACTTGACGCTCGCCCGAATCGCACGTAATGCTTTTCTCGGATTCTGCGCTCGTTGCTCGGAGGCATCGCGCTCCGCTCGCAGGTACATGCTTTCGTCGTCGAGCGTGTCCGGAATCGCGCGGATCGAACAAGCCAAAACTCAGCATTATTGGCAATTATTTTCACCGACGTCTTTTGCGAGTATCAGTGACTGTGATTGGGTACCAAGTACTTCGATCAGCGGTAAATGTGACCGAGCGCACAGAGTTACCGAACAGCCGAACAGTGTGAATGAGCACTGGAGAATGTGCCTCGAGAACAAAAATCTAAAGCAACTGCTCAAAAAACGGCGAGAAAGTGTTTTCAATATTGAGAACACTGCTTCAGAGCGAAACTCGAACGTTGAGCGAGCGACTAGAGCTTTAGATATACGCCTTTCGCCCATGGTGACGGGGCGTAGCAGCAGCCTGATGGTCCAGTTGCAGCCGACCAGCCCTTCCATCGAGTACCAAAGGTACCCGTGCCGCTACTGCAACCAGGTATTCTTTGACTTTTGCGCCATGACCTGTCACATTAGAAGCGTCCACCAGGACTTGACCGCGACGCTCGCCGGCGGGGCCTTTTGCGGCAATTTCGGGACCGACTCCGAGGGCCAGCACAGCAGCAGCGGCGGCGCAAACTCGGAAGAAGACGACGAGGAAGTCGAAGAAGAGCGCAACAACAACGACATCTTCAAGCCCTTGAACTTTGCGTGCAAGGAGAGCTTGTCCCGCGGGGACAGGGACAGCGCATCGGGAGAGGTCCGAAAAGCCCAACGATGCGACGACCCGACGAGTCCGGTGCACGGTTTCAAGGACTTGAACTTTGTGGATTTCACGACGACAAAATTCTCGGCGATCGCGAGGAGCGTGTGCGAGCAGACGGTGCACAGGCCGTCGCCTTGCGACTCGCTCCGCTTCCAGTGCCGCAAGTGCCCGCGCGGCTTCCCGTGCCAGTCGGCCCTGGAGGCCCACGAGGTGGACTGCGGCCGGCCCCCGGCCCGGCCCAGCCAGCCCCCGCAAGGCCAAGTTTCCAGCGCGACGGCGTTTTTCGACGGCCTCCACCTCCGGAACAAGGCCTGCCTCGCGGCCAGGGAGAGTCCCAAGGACCTCGCCGACATCTCGTCCATACTCTCGATAACCGCGCCGAGTTACGCGGCCTTGGCGGGCCTGAAGCCACTGGCCCAGCAAGCGAGTGCCGCCGGCGGCCAGGAGCGCAAGGACAGCGGGTCCAACTCCTCGCTGGACAACTACCACGACGAGGAGCTCCAGGACGACTTTGCCAGCGAGTTTCGGCGAATGAAGAACAAGGGCGAGTTCCCCTGCCTGCTCTGCAAGTCCGTGTTCCCGAACCTGCGAGCCCTCAAGGGCCACAACAGGACCCACTTGAACGTCACCTCCGGCGAGCCTTATCCTTGCTGCTTGTGCCCCTACTCCAGCACGGACAAGTCCATATTCCTCAAGCACCTGCGCACCCACAACGGCGACCGCCCCTACGAGTGCACCGAGTGCCACTTCCATTTCACGACCAAGGCCAACTGCGAGCGCCACGTCCGCAATCGCCACGGCAAGACCAACAAGAAGGAGATCCAGAACTACATCCTCCAGCACCCCATCGAGGACAGCAACGTCGATCCGAGCATCGAGACGGCGAGCACCGGTAAGTCTCGGGCATCGCTCGCTGAGCGTTGCTTGGCGAGCGTCGCTCGGTGTAGCGTTGCTTGGCGAGCGTCGCTCGGTGTAGCGTTGCTTGGCGAGCGTGATGCGACGAGGAAAGCGCCCGAGGCGAGGCCTCTGAAAGCCTTCTGCAAACGCTCGAGCCCGAGCGCCCCCGAGACCCAGTCGTTCCTGCAGCTGAGGGCGCTGCCGCCCCAGGACCAGCCCGAGAACCTCTGCACGAAGACGCGAGGAGAGCCACCTCTAGTCATGCCCGAAGGCCCGGTGTCGCCGCGCGAAGGGGACGACGTGGCCGAATGCGATGACGAGGACGAGGAAATGGGCGACTCGCCGCTCGACCTCTCCGTCGAGCCCAACGTCCTCGATCTCAGTCAGAGGAGCAAACGCCCGGAACCCCGCCCCTCCCCAGCCCCTTCGTCCTCGTCCGCGCCAGCGGCAACAGCTCCCCTGGACATCGACCAGCTGCTGATATCCGGGGCCCTGATGCAGCACGTCTACGCCAACGAAATGCTGCGCAGGAACTTGAGCTACGCAGAGTCCCCGATTGCAGCGGCGGTGGCCCCTCCGCGACAGGCCCCGTACCTCGTCAACCCGCCGCGCTACGTGAACCAGCCGCGCTTTGTCGGCACCCCGCACTCGTACCTCTTCCAAAAGGAACTCGTGCGCGGTCTCCAGACCAGCGGGGGCAGCCTCGTGCAGCCCCTCGCGCCGCCGCTCCTGAGCGCCCTCGCGCCTCCCAGCGCCCCGATTCTGGGCCCTCTGCCGCGGCTCCCGAGCGCGGCCCCGGCCCCTCTCCCCCCGCCGACGCCTCCCGAGGCGCCGTCCTTTGCCCAGCAGCAGCGGCAAGGCAACGCGGACAGAACTGCGTCGCCGCCGACCTCGACCACGGTGCGCATGCTCCTCAAACACGGCCACCTCGTGCCCAAGCAAAAGCAGCGACGCTACCGCACCGAGCGTCCCCACGTCTGTCCCGTCTGCTCCGCCAAGTTCACCCTGCGCAGCAACATGGACCGCCACGTGAAGCAGCAGCACCCAGCGAGCTGGAAGAAGCGCCCGCGCAACGCGAGGTCCAACCGCGGCCGGCCGCCGTCCCTGGCCTCGAGTTTCGGATCCCCGAAGAAGCGCCCCGGCGACGCGTCCCCTTTGCCCGAGGCGTCCCCTTTGCCCGAGGCGTCCCCGGATCCCGCCAAGCACGCCATATCCCGGGAGGTCAAGTGCGCCATACTCGCGCAGCAGCAGAAGCACGTGGTCAAGCAGGACCTCAAGCAGGACCTCAAGCAGGACCTCAAGCAGGACCTCAAGCAGGACCTCAAGCAGGACCTCAAGCAGGACCTCAAGCAGGACCTCAAGCAGGACCTCAAGCAGGACCTCAAGCAGGACCTCAAGCAGGAACACGCGGTCAAGCAGGAACAGCTCGAGTCGGACGAGGAGCTCGTCATCGACGAGCAGCGACCCCCGGCACCGGTCAAGATGGAGACGGACGACCAAGGCGACAGTGAGCAGCGAGTCTCGGACTTGGCCCGCGAAAACGGGGCTGAGCAGGCGGCAACGCTCCCCGATCGCGGCCTCGACGACCTCGGGAATCCCGTCCCCGGCACTTCGAGGGCGACCGACTCGGGGCCCAGCCAGCCCCGCGAGGCCCGGGATTTCGCGAGCGTCGATGAGATTCTCGACAACGCGTCCCGGAGGTACCAGCAGTTCCAGTCGCAGTACATGAGCGAGGACGAGGACACGGCCAGCGACGGCAACAATTCCGGCAGCGACGAAAGGTCCATGCCGGACTCGCCGCACTCGGCGAGCTCCGCTCAATCGGCCCTGTCCGCCAGGAGGAAGATGAGGAGGAAGAAAAAGAAGAAGATGTCGAAGAAGAAGTCGGCCTACTCGACGGCCCCGAATCGCGTCACCTGCCCGTACTGCTACAGGCAGTTCCCATGGACCTCGTCCCTCAGGCGGCACGTCCTCACGCACACCGGGCAGAAGCCCTTCTGCTGCCGGCACTGCTCCCTCCTGTTCACCACCAAGTCCAACTGCGACCGGCACCTCATTCGAAAGCACCCCGAGAAGAGTCTCGCGGCCGCTGCCCCCGCCAACGAAAACCAGAGCCAGGGGAGCCCTTTCAACGACAGCGACCTCGCCAACAACAGCAGCAATGGCGCCAGCGGCGGCGCCTTCGCCATGAGGAACGTCCCGGAACGCCCGTACAAATGCAACCTGTGCCCGAGCTCGACTTTCGCGAGCCTCGGCAACCTGCGCAAGCACCAGCAGTCGAAGCACCGAGCGTCCAGGCCGCCGGCAAGCCCCGAGAGGGAGGACCGGAGCCCGGAGAGGAGCAACAAGTCGCGGCCCGAGCAGCAGAGCGATTACGAGAGCTCCTCCGCTGGCTCGTCCTCCGAGCTCGCGACCGCCGGGGCCACGCCCGAGAGCTCGCCCGTCGCCTCGCTCGAGCCTCGCCCGAGCGACGGGCGAGGCTCCCGGCGCTGCCCGAGGTCACCGGCAGCGCGGCCGTCGTCGCCGGCGCCCGCGCCGTCCGAGGCGCCCTTCAAGTGCCACCTCTGCGACAGCGGCTTCGCCGCCCGCGACGACTGCCTCGAGCACCTCAAGCACCTGCACCGACGACAGTACGACGAGCTCATGGCCAAGAACGCCTTCGACGAGGAGGAACGACGCCAGCCTTCCGCCAGCGACGGCGAGGACAAGCAGCGAGCTGGCAAGTTGCCCGACTACAGCAATCGAAAGGTGAAGTGCGCTTTCTGCATGCGACCCTTCTGGTCGGCCGAAGACTTGCGCAGGCACATGCGGACGCACACTGGGGAGCGCCCCTTCGCCTGCGACATCTGCCAGAGGCGCTTCACGCTCAAGCACAGCATGCTGCGACATCGCAAGAAGCACAAGTCCAAGAGCGTCGAGCGGGCCCGCCTCAGGCGCTCCGCCAGCGAGGACGAGGACCAGGCCCCGCAGCAGGCCCAGCAGCGAGTCGGCTCCAGCCCGGCGGCGGTCATCGCGCCCCGCTCCAGCGACCACCAGCTGGCCACTCGCTACGAGAGCGTCCGGGGCCACTCCCTGCCGACCTTCTTCCCCGCGCCCCCCGCCGGCGACGCCGCCCCGAGCGCCCTGCAGCCCTTCGAGCACCGCTACGAGCGGCTCACCGGGCGCATGGGCAACATCAGCGACATCAGCGACGCCGCCGACCACGACAACAACGACCTCATCTCCAACCTCCTCGGCATCCGCGACAAGAGCATCATCGACAGGGTCCTCCAGGCGTCGCCCGACGACGCCGCGAAACTGCTGGGCGTCCAGGACGACCGCGAGTGA
Protein Sequence: MWSDGGGGGGGGGGGGGGEIVGLSLHQDFLDLFCSVRLFLGLEADTREISSPGKSDQSPEKIEVKCVWGINLSVIGIYTLRVRFSRKLEERAFIGVYVHIYTSAYSTRRDSLASLRHLTLARIARNAFLGFCARCSEASRSARRYMLSSSSVSGIARIEQAKTQHYWQLFSPTSFASISDCDWVPSTSISGKCDRAHRVTEQPNSVNEHWRMCLENKNLKQLLKKRRESVFNIENTASERNSNVERATRALDIRLSPMVTGRSSSLMVQLQPTSPSIEYQRYPCRYCNQVFFDFCAMTCHIRSVHQDLTATLAGGAFCGNFGTDSEGQHSSSGGANSEEDDEEVEEERNNNDIFKPLNFACKESLSRGDRDSASGEVRKAQRCDDPTSPVHGFKDLNFVDFTTTKFSAIARSVCEQTVHRPSPCDSLRFQCRKCPRGFPCQSALEAHEVDCGRPPARPSQPPQGQVSSATAFFDGLHLRNKACLAARESPKDLADISSILSITAPSYAALAGLKPLAQQASAAGGQERKDSGSNSSLDNYHDEELQDDFASEFRRMKNKGEFPCLLCKSVFPNLRALKGHNRTHLNVTSGEPYPCCLCPYSSTDKSIFLKHLRTHNGDRPYECTECHFHFTTKANCERHVRNRHGKTNKKEIQNYILQHPIEDSNVDPSIETASTGKSRASLAERCLASVARCSVAWRASLGVALLGERDATRKAPEARPLKAFCKRSSPSAPETQSFLQLRALPPQDQPENLCTKTRGEPPLVMPEGPVSPREGDDVAECDDEDEEMGDSPLDLSVEPNVLDLSQRSKRPEPRPSPAPSSSSAPAATAPLDIDQLLISGALMQHVYANEMLRRNLSYAESPIAAAVAPPRQAPYLVNPPRYVNQPRFVGTPHSYLFQKELVRGLQTSGGSLVQPLAPPLLSALAPPSAPILGPLPRLPSAAPAPLPPPTPPEAPSFAQQQRQGNADRTASPPTSTTVRMLLKHGHLVPKQKQRRYRTERPHVCPVCSAKFTLRSNMDRHVKQQHPASWKKRPRNARSNRGRPPSLASSFGSPKKRPGDASPLPEASPLPEASPDPAKHAISREVKCAILAQQQKHVVKQDLKQDLKQDLKQDLKQDLKQDLKQDLKQDLKQDLKQDLKQDLKQEHAVKQEQLESDEELVIDEQRPPAPVKMETDDQGDSEQRVSDLARENGAEQAATLPDRGLDDLGNPVPGTSRATDSGPSQPREARDFASVDEILDNASRRYQQFQSQYMSEDEDTASDGNNSGSDERSMPDSPHSASSAQSALSARRKMRRKKKKKMSKKKSAYSTAPNRVTCPYCYRQFPWTSSLRRHVLTHTGQKPFCCRHCSLLFTTKSNCDRHLIRKHPEKSLAAAAPANENQSQGSPFNDSDLANNSSNGASGGAFAMRNVPERPYKCNLCPSSTFASLGNLRKHQQSKHRASRPPASPEREDRSPERSNKSRPEQQSDYESSSAGSSSELATAGATPESSPVASLEPRPSDGRGSRRCPRSPAARPSSPAPAPSEAPFKCHLCDSGFAARDDCLEHLKHLHRRQYDELMAKNAFDEEERRQPSASDGEDKQRAGKLPDYSNRKVKCAFCMRPFWSAEDLRRHMRTHTGERPFACDICQRRFTLKHSMLRHRKKHKSKSVERARLRRSASEDEDQAPQQAQQRVGSSPAAVIAPRSSDHQLATRYESVRGHSLPTFFPAPPAGDAAPSALQPFEHRYERLTGRMGNISDISDAADHDNNDLISNLLGIRDKSIIDRVLQASPDDAAKLLGVQDDRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -