Prob008160.1
Basic Information
- Insect
- Platygaster robiniae
- Gene Symbol
- RERE
- Assembly
- GCA_028476575.1
- Location
- CM052024.1:30314177-30323938[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-09 1.8e-05 26.6 0.4 2 46 123 168 122 168 0.93
Sequence Information
- Coding Sequence
- ATGTCCGCTGGTGTCCAGGGCGAAATACGCATTGGCCCATCGCACCAGGCACAGTTGCCTGAGTACCGGCCAAGTGTTCCGGCCGACCAACTACTCCCCGACTCTGAATTTTACAAAGACCGCGAAGAGCTAAGATGGATGCCCGCGATGACCGCGGATTTGGATTTGCTAATGTACCTGAGGGCGGTGCGCTCGATATCCGCGTTCGCGGGAATGTGTGACGGCGGATCACCGGAGGATGGTTGCATGGCTGCGTCGAAAGACGGCACCACCATCAATGCCCTTGACGTATTCCACGACTCCGGATACACGACGGGAAAGGCGCTGCAAACCATCGTCAAGTGTCCCGTGCCTAAAGGCATCGACAAGAAGTGGTCGGAAGAAGAAACGAAACGTTTCGTCAAAGGCATCCGTCAGTTCGGGAAGAACTTTTTTCGGATCAAGAAGGATCTTCTACCTCACAAAGAGACGGCGGAGCTCGTCGAGTACTATTACGTGTGGAAAAAATCCCCGGGCGCTACCAACAACCGGCCCCATCGTCGCCGTCGCCAGGGTTCTCTGCGCCGGATACGAAACACGAGGAATTCGAGGGCGGGAACCCCGAAAGAGGAAGTGTCCACGCCGACGAAAGACGTGGCTCCGGCGCCCGCGAGCGCCAAGGAGCCAACGGAGCCCGAGATCGTGCCCGTGGGCACGCCCGCGAGCAACAATCCGGGCGGCGAAGTGAGTTCCGTCACGGAGGACGACAACTCGGAGGAGGACAGCGATTCCAGGGACACGAACACCAACGGCGTCTCCTCCCAAACCTGCCAGCACTGTTTCTCGACAAGTTCCAAGGACTACCAGATCGCCGGCAAGGATCGGCTACTTTTGTGCGCAGAATGCAGGAATCACTTGAAGAAAAACGGCGAGCTGTCGCCATCGTCGACGTACTTGTTTCGGCCCGTGCCAGCTGAGTCTCCGGAGAGTCCTGGTAGAATGCGCACGCGCAACAAGGCCAAGGAAACCCCGAGACCATCGAGACCTCGACGCGCCGGCGGCAACGACACGCCGGATCAAGAGAAGCAACAAGACAAGTCCAACCTGGACAAGGCCAAGAAAAAGTCCTCCTCGGGCAAACCCGAGACACCCAAAAAGGGCCCCAAGCGGTCAGCGGTGGAGGAAAACGAGGAGGACAAGGAGTCGCAGAAGAAGAAGAAAGGCGTGGAGAGGCCACCCGAGAGTCCGGCCGAGAGTTTGACGACGGACAGCAATTCTCTGATGGACGAGCCGGAAAGAGAGGGAGAGGGTGAAGTCGGGTCAGAGACCCAAGCCGGTGCCCAAGGTGGGGGAAGTGGCGGCGGTGGCGGGGAAGAAGTGGAAAGTCCCGAGAGGCCGAGGACACCCGTTGCCATGGAGGAAGAGACCGAGGCGAACGCTGGGCCCATTAGTGGAGCCCAGGTCGGGCCAGTCATTTCGGTCCCTGTTATCCACTCGGCTCTGGAGAAAAAGGCTGTCGACGATGCGGAGATAAAAGATCTACTCTGCCATTCAGTCGAAGACCCAGTAGCCACAATTCCTGACCAACAACCCGTGAAACTCGAGACCATGGACGTGACCCGCGCCCCGTCACCCATTGTAGAAGAAACCCCATTACTGAAATCAGAACCCGAACAACCACCCCCACCCTCGAACCTCAGCGAGCCACAACCTTTGCCCAACATCAGCGACCTCAGTCAAAACTTCCCCAGAAACTTACCCCTGTCGAACCTCGCGTCGTCCCTACCCCAAAGTCTCTCGGTGCCTCTGATATCGCAGAGCCAGCAACCGTTGTCGCTGACGATGCAATTCCCACCTCACAATGTCCCACCCGCGCAAAGTGTGCCGCAAAACCTCTCCCAGAATGTACCCAACGCGCAAAACACACCGTCCCAAATGATGGCGACGGCCCCCTCCCACGTCGACAACTCGCCAACCCTGACGGCGACGTCCGGTTTGACGGTGGCGCCTCCTCCTATGAACTTGCAGCAGCACAATCACCCGATCTCTTCCATGATGCCGAGCTCGCCGCAGCCGCAGCCCTTGGGCCTGACAATTTTGCACCAGGACAATAGAATGGCGATGGAGAACGAGAGGATGGCGAGTAGGGAGAGTAGGCAAGAGAGGACGCCGCAAGAGGGCGAACCTGAGCGAGCGGAGCTAGCGCCACCTCAGCCGCAGTTCAACTTGTTCCAACCGATACAGTCGTTGCAGCAACAGCCGAGCGGGGTGATGGGACCCTCGGAAAAGCTGCCGTCGTCCATGTACAGCGTGGCGGGGACTCCGCCTATGGAACCCCAGAACTTGAAGATCAAGCAGGAGATCATACCACCGCCGGACCCGGATCCACTGCAGAGCCTGAAGGAGGTGAAGGTGCCCGGGTATCAGAGCGGGTTTCCAGGTCCCAGTCTGGACAACATTAAGAAGGACCCGGACGGGGCGACGAAGCCCCCGACGCCCAAACACCACCATCCCCCGGTGTCTTGCTCCTCGTCGTCTTCCGGCCCCCCGTTGGGCATGCCGCAGAACATCGTGGCCTCCCCGAGCCCCGCCGCACCCACCCCTACGGCCATTGTCCCGAACCTGCCCCCGCCACCAGGCTCCATTCCCCAGCCCGTCATGCATCCATCCCAGCAGACAAGTCCCCACATGGCCCACGCCTTCCATCCCCATCACCTCATGCATCACCCGCTCTTTGCCGCGATTCATCCCACTTACCATCCTCATTACGGTTATCCCCCAGTGAGTAGTTACCCCTCGTTTCCGGCGTATCCATACGGGCCCGTGCCCCACGCGATCCCACCACCGTCCCCTCAGCGTAGCCAGGAAAGCACGACCATGATGACGGCTCATCACTCGAGCAGCTCCAGCGTCACCACGCGGGAGGAGGGTGAAAATTTGATAGCCACTCATCATCATTCGTCTAGTATGCATCAAGCCACTACGCTGCATCATGACAAAATGTTGACCATCTCCTCGCACAGTTCGCACAGTCACTCGCACAGCAGCTCTCAACAGAGGAAACCTAGCGCCATGGTGTCCTCTTCTTTGACGAGCTCCACGAGTTCCAGCGTTCATCACCATCACCATCATCATAGGCAGTCTCAGCAGCACCAGCCAAGTATAGTGAACGAGCCGAAGGTCGAGCCGGAGCAAGTCCTCGAGGAAGATGACCCGATCCCGAGCCCAAGGGGACCGAGTCCCGAGCCCAGAATCGAGGATTCCGAGTGTCATCGGTCCCAGTCGGCCATTTTCTTAAGGCACTGGAACCGGGGTGAGAATAATTCTTGCACCAGAACGGACCTGATGTTCAAACCCGTGCCGGACTCGAAGCTGGCGAGGAAAAGGGAGGAGAGGTCGAGGAAACAGGCCGAGAGGGAGAGGGAAGAACGAGACCGAGCGGCGGCAGCAGCTGCTGCGGCTGCACAAGCGCAGGTAAGAAGTTTTTAG
- Protein Sequence
- MSAGVQGEIRIGPSHQAQLPEYRPSVPADQLLPDSEFYKDREELRWMPAMTADLDLLMYLRAVRSISAFAGMCDGGSPEDGCMAASKDGTTINALDVFHDSGYTTGKALQTIVKCPVPKGIDKKWSEEETKRFVKGIRQFGKNFFRIKKDLLPHKETAELVEYYYVWKKSPGATNNRPHRRRRQGSLRRIRNTRNSRAGTPKEEVSTPTKDVAPAPASAKEPTEPEIVPVGTPASNNPGGEVSSVTEDDNSEEDSDSRDTNTNGVSSQTCQHCFSTSSKDYQIAGKDRLLLCAECRNHLKKNGELSPSSTYLFRPVPAESPESPGRMRTRNKAKETPRPSRPRRAGGNDTPDQEKQQDKSNLDKAKKKSSSGKPETPKKGPKRSAVEENEEDKESQKKKKGVERPPESPAESLTTDSNSLMDEPEREGEGEVGSETQAGAQGGGSGGGGGEEVESPERPRTPVAMEEETEANAGPISGAQVGPVISVPVIHSALEKKAVDDAEIKDLLCHSVEDPVATIPDQQPVKLETMDVTRAPSPIVEETPLLKSEPEQPPPPSNLSEPQPLPNISDLSQNFPRNLPLSNLASSLPQSLSVPLISQSQQPLSLTMQFPPHNVPPAQSVPQNLSQNVPNAQNTPSQMMATAPSHVDNSPTLTATSGLTVAPPPMNLQQHNHPISSMMPSSPQPQPLGLTILHQDNRMAMENERMASRESRQERTPQEGEPERAELAPPQPQFNLFQPIQSLQQQPSGVMGPSEKLPSSMYSVAGTPPMEPQNLKIKQEIIPPPDPDPLQSLKEVKVPGYQSGFPGPSLDNIKKDPDGATKPPTPKHHHPPVSCSSSSSGPPLGMPQNIVASPSPAAPTPTAIVPNLPPPPGSIPQPVMHPSQQTSPHMAHAFHPHHLMHHPLFAAIHPTYHPHYGYPPVSSYPSFPAYPYGPVPHAIPPPSPQRSQESTTMMTAHHSSSSSVTTREEGENLIATHHHSSSMHQATTLHHDKMLTISSHSSHSHSHSSSQQRKPSAMVSSSLTSSTSSSVHHHHHHHRQSQQHQPSIVNEPKVEPEQVLEEDDPIPSPRGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMFKPVPDSKLARKREERSRKQAEREREERDRAAAAAAAAAQAQVRSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01213988;
- 90% Identity
- -
- 80% Identity
- -