Prob040535.1
Basic Information
- Insect
- Platygaster robiniae
- Gene Symbol
- CDC5L
- Assembly
- GCA_028476575.1
- Location
- CM052021.1:47905436-47907668[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-14 9.2e-11 43.5 0.5 2 46 9 54 8 54 0.96 2 2 1.9e-06 0.0088 18.0 0.1 1 27 60 86 60 89 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGAGGAATGACGAAAGGCGGTGTCTGGCGGAATATCGAGgatgaaatcctgaaaggagctctgatgaaatatgggacaaaccaatggggccgaatcgcctcgctgctaccccaaaaatcagcacagcaatgcaaagcacgatggttcgaatggctcgacccgtcgataacaaaaacggaatggagtcgagaggaagatgagaacctgctttgcctgacgaagacaatgccagcgcaatggcagacgatcgccccaatgaaaaaggaggaaggcggtggcgatgacccctcggacgaccctcgcaaactgaaaccaggtgagatcgacccaaacccagaaataaaacccgctagacctgaccttaaagacatggacgaggacgagctagaaatgctatcggaagcaccagcacgattggcaaacacgcaaggcaagaaagccaagaggaaggctcgtgagaagcaactcaaagaggccagtcgcttggcagctcttcagaaaacgcgtcaactgcaagcagctgggatcgacatcccgcaaaagagcaaacgagagcgaggagttgattacagcgcggaaattccgtttgagaagaagccggctcagggattccatgacacgtccaaggagtacgtggatcccctgggggctgacttttccaagcagcacctcagtggtggagctcttcgtaagaagaaggaaaaggccgagaggaggaaggacaagcagaagctgcagaagagggaggagacttacgttcctaagaccatgctgaatactgaggagcccgcgagcaagaggagcaagcttgtgctgccagatccgaagatttcggaccaggaAACTTGA
- Protein Sequence
- MPRGMTKGGVWRNIEDEILKGALMKYGTNQWGRIASLLPQKSAQQCKARWFEWLDPSITKTEWSREEDENLLCLTKTMPAQWQTIAPMKKEEGGGDDPSDDPRKLKPGEIDPNPEIKPARPDLKDMDEDELEMLSEAPARLANTQGKKAKRKAREKQLKEASRLAALQKTRQLQAAGIDIPQKSKRERGVDYSAEIPFEKKPAQGFHDTSKEYVDPLGADFSKQHLSGGALRKKKEKAERRKDKQKLQKREETYVPKTMLNTEEPASKRSKLVLPDPKISDQET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -