Prob014333.1
Basic Information
- Insect
- Platygaster robiniae
- Gene Symbol
- RCOR3
- Assembly
- GCA_028476575.1
- Location
- CM052019.1:9648246-9660931[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8 8.8e+03 -1.2 0.0 20 41 43 67 40 69 0.77 2 4 2.6e-09 1.3e-05 27.1 0.0 3 46 128 171 126 171 0.96 3 4 1.9 8.9e+03 -1.3 0.3 37 44 276 283 271 284 0.87 4 4 1.4e-11 6.7e-08 34.3 0.0 3 46 374 417 373 417 0.97
Sequence Information
- Coding Sequence
- ATGGTTTTGGCCGAACGAGGCCCCGACAGCGTTCGAAACGGCCGTAGATCTCAGGGCCCCAGCCCAAACGGACAAACAGAGTCTTCGAGCGACGACGACGCACCAGCAGAAGAAAGAATCAAAGTTGGGCGAGATTATCAAGCTGTAGTTCCTGACTACATACCAATTAGTGATCGTCGCGTAGAACAATGCCCAGACCGTGCCCTGCTCGTTTGGTCACCAACGACGGATATTTCCGATCAAAAGTTGGACGAGTATATAATTCTTGCCAAGGAAAAATATGGTTACAATGGAGAGCAAGCATTAGGAATGCTTTTTTGGCACAAGCATAATTTAGAGCGCGCCATCTCCGACTTAGCGAATTTTACACCCTTCCCAGATGAGTGGACGATAGAAGACAAAGTACTGTTCGAACAAGCCTTTCAGTTCCATGGAAAAAGTTTTCATCGTATTCGTCAAATGCTTCCGGACAAATCCATAGCGAGCTTAGTAAAATATTACTATAGCTGGAAAAAAACGCGTACCAAGACATCTCTGATGGACCGTCAAGCGCGAAAATTGAATACCAGTGGAAGAGAGGGCGAAAACGGTAGCGAAAACGGTAGCGAAGTGGGCTCTGACACGAGTAACGAATCGGAGGAAAAAAAATGGACGATCCATCGCGGAATTCGTCGTGGAAAGAACCAGGCTGCCCCAGGAAGCCAAGGCGCCGATGCCAAGGCCTCGTCCGACTCGGAAAACGTTCCCCAGGTTCAGGGCTCGTGTAGCAACTGCGGAATTGCTTGCAATAACGTTCGTGTGACACCAAAGGGACACGCGTGTCATAGCTGTTATCTGCATTGGAGGCGAACGGGGTTAGCTCGGCCGTTGAGCTCGATGCCGGGTCGTTCGAACAAGCGAAAACCTCCGCGTGGATTGGTCGTGAACCAGGACGATTTGGCGGCCCTGGCTGCCCACCCAAATCAGGCCAACAACAGCTTGCAAACCATTGATTCCGAAATAGTTAGCCTGAGGCGACAAATCCAAACCAATAAGCAGCAAGTGAGCTCGTTGAAACGCAAACTGACCGACGGAATCAACGACTTCAGACCTCCAGAAATAGTTAATCGCATAAACGCGCGTTGGACCAACGATGAGCTTTTAATGGGCGTCCAAGGTGTGCGGAAATACGGAAGAAATTTCGCCGCTATCGCCGACGCGATCGGAACGAAGACCGAAGTACACGTTCGGTCATTTTTCATAAATTATCGTAGGAGGTACAATTTGGATAACGCGGTCAAAGATTACGAAGCTGAAAACGGTCCTATTTTGATCGACAGCGAAAAAGACGAGAAGGTCGAGGAGGATCAACCAATGCAGTAA
- Protein Sequence
- MVLAERGPDSVRNGRRSQGPSPNGQTESSSDDDAPAEERIKVGRDYQAVVPDYIPISDRRVEQCPDRALLVWSPTTDISDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAISDLANFTPFPDEWTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTKTSLMDRQARKLNTSGREGENGSENGSEVGSDTSNESEEKKWTIHRGIRRGKNQAAPGSQGADAKASSDSENVPQVQGSCSNCGIACNNVRVTPKGHACHSCYLHWRRTGLARPLSSMPGRSNKRKPPRGLVVNQDDLAALAAHPNQANNSLQTIDSEIVSLRRQIQTNKQQVSSLKRKLTDGINDFRPPEIVNRINARWTNDELLMGVQGVRKYGRNFAAIADAIGTKTEVHVRSFFINYRRRYNLDNAVKDYEAENGPILIDSEKDEKVEEDQPMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00684724;
- 90% Identity
- -
- 80% Identity
- -