Prob034336.1
Basic Information
- Insect
- Platygaster robiniae
- Gene Symbol
- KLHL30_1
- Assembly
- GCA_028476575.1
- Location
- CM052021.1:1816212-1821782[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3 6.9e+03 -1.3 0.0 29 39 149 159 149 162 0.88 2 2 6.2e-13 1.4e-09 39.3 0.0 3 43 316 357 314 359 0.93
Sequence Information
- Coding Sequence
- ATGTCCAAAATGTCAGCCAAGGAGTTGACTTTTCGTTGGCATGACCACATGCCAAATATGATCTCCTCCATGGAGGAACTCCTCCAGGAAAGGCTCCTCACAGACGTGAGCATCATCCTCGAAGGTGGCCGACAAATCGAGTGCCACAAAATCGTCTTGGCCACAGCCTCCAACGTCTTCCACAAGTTACTGGTAGGACGAAATGACGTGTCGTCCGTCGCCTTCCTCGACATCAGTCACAAACTAATGTCGGATCTCTTGGAGTACATGTACTCTGGCAAGGTCCAAATTTTTGAATCGGAACTGGAGAAATTCCTGCAAATCGCAGACAGACTGGAAGTCAAAGGGCTCACCACCATCGACGGCGAGAATCGCCCAATCAACACCATAGCCAGCAGCCCTCCACCCATGGTCAACAGCAGTACTGTGAACCACCAATCTCCACCCCATTCCACCATGGAGGCCTTCTACAGAACCATGTTGGAAAACCCAGTCGTCGCAAATTACATATCACAGCAGTTTCCCATGAACCAAAATTTGCCCTACCCCATGGTACCGGGTTTTGGGTCCATGGGTCCCAGACTGCCGGTGGCTTATGATACCTTCAACGGGGCGAGCAACGACACCGTTGGCGTCCTCAACGTCAACCAGAAGTACGACCAGGAAAATCGAGGATCTCCGATGTTGAGGAACGTCCTGAATCAAGGTCCAGATGTTCATTGCTTTCCCCAAGAGGGCTTTTCGGTAAGGTCGCCCAGCAACAGTTCTCCGGACTCGGAAAGGCATTCCAGCGTCGACGGGTCCCAGGTCGAATCTTTCGGTCCCATATTCAAGAATGAGCCTAATGCTGAAGGACAGGTCATCCAATGTCCACGCTCCGCTGGAAAAACTGCTTCTGGCAAGTCTCAAAAAATGGACTGGAAGCGCTACAAACAATACAGCTCAGAAGATCTCGATAACGCGATTAAAGCTGTGCAAAATGACAAAATGTCGGCTTTAAAGGCATCAAAAAAGTATTCAGTTCCAAGCAGAACCTTATACGACAAAATCAAAAGGCTCAACATTGCGAAGACTCGAAAAATGAAACGCGAGCCATCGTCCAAAAACAATGGGAGAAGAGCCAGCAGCGCCTGTTTCCCTTACGGCATCGGATGCAACGTGGACGGCAATATTTACAACGGCAGTTTCTATTACAACGGCAACGAATCGATGGAAGTTGCCTATAACAACAGCACGAGCCCCGAAAACTCGCCTCTCTTGTCCTCGAACTCGCGAAACCATTCGATCGAGAATTTGCCGACACCGGTTCGCGAGCCTGCGGAGGACGCGATGAATTCGATTTCATCGCAGCCGCCCCAGCAACAGCCCCAAGAGCAGCCCCAGCAGCTGCCCCAGGAGCAGCCCCAGGAGCAGCTCCAGCAGCAGCCCGCTTGCAGCGAGGATTGCGAATTGCCCCAAGACCTCACGATGCGCAAGCCCGAGCCAAAAACGAAACCCGCCGACAATTCCGAGATGGCTCATTAG
- Protein Sequence
- MSKMSAKELTFRWHDHMPNMISSMEELLQERLLTDVSIILEGGRQIECHKIVLATASNVFHKLLVGRNDVSSVAFLDISHKLMSDLLEYMYSGKVQIFESELEKFLQIADRLEVKGLTTIDGENRPINTIASSPPPMVNSSTVNHQSPPHSTMEAFYRTMLENPVVANYISQQFPMNQNLPYPMVPGFGSMGPRLPVAYDTFNGASNDTVGVLNVNQKYDQENRGSPMLRNVLNQGPDVHCFPQEGFSVRSPSNSSPDSERHSSVDGSQVESFGPIFKNEPNAEGQVIQCPRSAGKTASGKSQKMDWKRYKQYSSEDLDNAIKAVQNDKMSALKASKKYSVPSRTLYDKIKRLNIAKTRKMKREPSSKNNGRRASSACFPYGIGCNVDGNIYNGSFYYNGNESMEVAYNNSTSPENSPLLSSNSRNHSIENLPTPVREPAEDAMNSISSQPPQQQPQEQPQQLPQEQPQEQLQQQPACSEDCELPQDLTMRKPEPKTKPADNSEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01215184;
- 90% Identity
- iTF_01215184;
- 80% Identity
- iTF_01215184;