Prob002298.1
Basic Information
- Insect
- Platygaster robiniae
- Gene Symbol
- kn
- Assembly
- GCA_028476575.1
- Location
- CM052029.1:13785240-13809432[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-138 1.1e-133 448.5 0.4 181 496 15 344 9 348 0.86 2 2 0.00057 19 5.3 1.4 500 562 318 377 316 388 0.66
Sequence Information
- Coding Sequence
- ATGCAGTATTCAGGCCCGCTTTTCGACCGAGCTCGCCTTCTAATTAAGTATTTCCTGAAATTCTTCCTGAAGTGCAATCAGAACTGCCTTAAGAACGCCGGGAATCCTAGAGACATGAGAAGGTTTCAGGTAATCATAGCGACGCAAGTTGGCGTGGAAGGACCATTGCTGGCAGTTTCGGATAACATGTTCGTCCACAACAACAGCAAACACGGGCGCAGGGCGAAACGATTGGACCCCAGTGATCCTGGTGAATATAATACTTTGTACCCACCGATTCCAACAACTATACCTTGCATAAAGGCGATGTCTCCGAGCGAGGGTTGGACAACGGGCGGAGGGACGACGGTTATTATCGGAGAGAATTTTTTCGATGGCCTTCAGGTCGTGTTCGGGACGATGCTGGTCTGGAGCGAGCTCATAACTCCGAACGCAATAAAGGTCCAAACTCCACCAAGGCAAATACCCGGAGTAGTCGATGTAACGCTATCATACAAAGGCAAACAATTCTGTAAAGGGGCTCCAGGACGATTTGTCTATGTCTCATTAACTGAACCAACGATCGACTACGGCTTTCAAAGGTTACAAAAGTTGATTCCAAGGCATCCTGGTGATCCTGAGAAAATACCAAAAGAGATCATTCTGAAGAGGGCTGCTGACCTCGCAGAAGCTCTCTACAACATGCCGAGACACAATTCCTCAAATGTTGCGATTACACCGAGAAGTCCCAGTTCTGGGCACCACTCAGTGCCCCCTACGTCGAGCTCAGCTGCGTCGTTCAATACTTACACTGGTCAACTGGCTGTCACTGTGCAAGAAAATGGCAGTCCTGCCAAGTGGACTGACAACGGTGGTTCCGTGACGACAGGTGCTGGCGGAGGTAACATCGACGCTTACAGGCAGAGCAGCAGCGTGAGCCCCAGAGGAGTCATCTCCAGCGGTGGCTACTGTGGAAGCTCAGCCAGCACGCCGCACAGTCACAGTACGAGTGGAAGTTACTCTGTTTCCAACCCCTATACAGGCAGTCCCACCCTCTACCCCCCACCGCACGAACAGTACAACCTTTTTTATACGTCCGGAGACGGGAGCGCGTTCGCACCCGTGGTCCGGCCACCGACCACCTCAGTCCCACCGCACTGGCCCACACAGCACCATCTCGCCACAGCCGCCCAGTAA
- Protein Sequence
- MQYSGPLFDRARLLIKYFLKFFLKCNQNCLKNAGNPRDMRRFQVIIATQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPGEYNTLYPPIPTTIPCIKAMSPSEGWTTGGGTTVIIGENFFDGLQVVFGTMLVWSELITPNAIKVQTPPRQIPGVVDVTLSYKGKQFCKGAPGRFVYVSLTEPTIDYGFQRLQKLIPRHPGDPEKIPKEIILKRAADLAEALYNMPRHNSSNVAITPRSPSSGHHSVPPTSSSAASFNTYTGQLAVTVQENGSPAKWTDNGGSVTTGAGGGNIDAYRQSSSVSPRGVISSGGYCGSSASTPHSHSTSGSYSVSNPYTGSPTLYPPPHEQYNLFYTSGDGSAFAPVVRPPTTSVPPHWPTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01489186;
- 90% Identity
- -
- 80% Identity
- -