Basic Information

Gene Symbol
stc
Assembly
GCA_030522825.1
Location
JAPYZL010194875.1:15637-22534[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 1 5.7e+04 -4.1 1.6 15 19 378 382 377 382 0.81
2 17 0.08 4.6e+03 -0.6 0.2 4 10 410 416 409 416 0.94
3 17 9.8e-08 0.0056 18.3 10.5 4 18 427 441 425 442 0.95
4 17 0.74 4.2e+04 -3.7 2.2 6 10 468 472 468 472 0.98
5 17 5.6e-05 3.2 9.5 15.4 1 18 478 495 478 496 0.91
6 17 0.39 2.2e+04 -2.8 0.5 1 5 505 509 505 514 0.82
7 17 6.8e-08 0.0039 18.8 12.6 1 19 534 552 534 552 0.96
8 17 0.44 2.5e+04 -3.0 0.7 5 10 581 586 581 586 0.94
9 17 7.5e-06 0.43 12.3 13.2 4 18 599 613 592 614 0.85
10 17 0.67 3.8e+04 -3.6 2.0 5 10 643 648 643 648 0.93
11 17 0.00084 48 5.7 8.2 1 11 654 664 654 665 0.96
12 17 0.56 3.2e+04 -3.3 0.7 6 18 671 675 668 676 0.56
13 17 5.9e-11 3.4e-06 28.6 14.0 1 18 681 698 681 699 0.97
14 17 0.34 2e+04 -2.6 1.2 6 10 728 732 727 732 0.88
15 17 1 5.7e+04 -5.5 9.0 1 18 738 755 738 756 0.70
16 17 3.6e-06 0.21 13.3 12.8 1 15 792 806 792 817 0.90
17 17 0.051 2.9e+03 0.0 14.9 1 19 824 843 824 843 0.95

Sequence Information

Coding Sequence
ATGGCCACTTGGAATGGCATGGATCCAGAAGAATCCCAAGACCCCAACTACTATTACTACTGCAATCAAAACAGCCACCTTCAAAATTGGCAATATTATGCCCAAAATTCACAAACTCCATATTACAATAATCCACCCAGCAACTCGGCTTACTATCAAAATTACAACAATCATTACATACCAGAGGGTGGTCCACATTACCATCCTGAACCACCCCGCGAGAAAAATTACCCCCATTACCAAGCATATCATCAAAACAGGAATGCAGAATCAAATTACAAGTACAGCAATCACCACCAGCGACATCCTAATCCCAGGAACCATGTAGGGCAGAGGAACGAAACCCCTGATTATCATTTTGAAAGGAAGCGCGAATCCAGGCAAAACTTTCATGGCAACTATGAAAATGCACAATCACAGCAGCAGAATCATTGCCCAGTTGGTAATAAACATAACAGGAATTACAATGGAGGCTCTGGGAGATTTCACAGTGATCGGCATCGCAATGATACATATAATTGGAACAGTAATCAATATGGTAGATCGAATTTGGCTGGCCCGAGTTCAGAAGAGCGGAGCAGGCGCAATTACAATAGGGACAAAGAAGAAAATAGGAATGTCAGAGAATATGAGGATCAAAGATTAGTTCGAAGCGAGAATTTCGGCACCCCGGGAAGGAAATGGAAGAATAGCGAAGAAAGAGTAGCTGGAGGAAACAAATCAGAAAAGTATCAGGACAAGTCAAAGGAACAGAAGagcaaatatataaataaagaaaagcAGCATCACCTGAAGAATAGGGAAAGTAAATTCGAAAGGAAATTGGAGAAGAGAGAAGTTGCCAAGGAAAGAGAAGAGGAGAGCACAAATTGGAGACAAAAATCTACCGTCGAGAGCAAACCGAGTGCGACGAAGAAGAAAGTCTTCAAAGATCAGAACTATGATGATGACGCGAGTCAGCGAGAGCGTTTGACGGATCAACTAAACAGAGGTCGATTGGAGTGTTTGGTTTGCTGCGAATCCATACGTCAAACTAATTCCATTTGGTCTTGTTCAAACTGTTACCACGTTTTGCACCTGAAATGTGTGGAACAATGGGCCAAAGTTTCGAAAGATGATAATGGCTGGCGTTGCCCTGCGTGTCAGAATATTTCAATTAGCGCGCCAGAAGACGTTTGCTTTTGTGGCAAAATGCAATGCCCAGAATGGAACCGTAACGACATGGCTCATTCTTGCGGTGACGTTTGCAAACGCTCTCGCACCTTGAACGACTGCGTCCACAAATGCACTCTCCTTTGTCACCCCGGCGCTTGTCAGCCTTGCTTCGCAATGGTCACGAGGTCCTGCGGATGCAAAAAAACTTCTCAAAGCGTGAAATGCAGCTCCACCGCTCTTTTGCTGTGCGAGCAAGTTTGCGACCAAATTCTCAACTGCGAGAAACACAAGTGCGCGAAAAAATGCCATCACGGAAGTTGCGGGGCTTGCGAGGAAAAAGTGAAACAAGTTTGCTTCTGTGGAGAACATAGCAGAGAAGTTTCTTGTGAAAAAGATACGCCTTTGATGTATTGTTGTGGGAATATTTGCAATAAGCTCTTGAATTGCAATAATCACAACTGCACCGAGATTTGTCACGAAGGACCTTGCAAAATTTGTCCTCTGAATCCTGACATTGTGACTCATTGCTGCTGCCAACAGACTCTGCTCGCGGATAAGAGGTCCAGCTGCTTTGACCCCGTTCCTACTTGTGATAAAATTTGCAGCAAGCCTTTGCCTTGTGGACAGCCAAgtaACCCTCACAAGTGCAAGGCAAACTGCCACACAGGAGACTGCCCGAAGTGCGAATTGACGACGATGGTTAGATGCCGCTGTGGACACATGGACAAGGAAATTTCATGCATGGAATTAGTCACGAAAGCTGACGACGCGAGATGCGAGAAAAAATGTACCAAGAAACGCGATTGTGGAAAGCACAAATGCAATCAAATGTGTTGCATCGAAATCGATCATTTCTGCCCACTTCCGTGTTCAAAGACTTTGAGTTGCGGCCGGCACAAATGCGAGCAAACCTGTCATAGCGGTCGCTGTCAACCATGTTATCGTAGCAGTTTTGAAGAATTGTATTGCGAGTGCAACACCGAAGTTATTTATCCGCCTGTGCCTTGTGGCACCAAGCGACCATCATGCGAAAAACCTTGTTCGCGTCGACATGCTTGCGGCCACGAAGTTTTGCACACATGTCACAGCAACGCGACGTGCCCTCCGTGCGCTGTACTGACTCAGAGGTTGTGCTACTGCAAACACGAGCTCCGAAAAGCAGTGCCCTGCTACATTAAAGAAATTTCGTGCGGCCGACCTTGCAACAAACCACTCCCTTGCGGCAAGCACAATTGCAAAACCTTGTGTCATGCTGGGTCTTGCGTTAAACAGGGCCAAACTTGCACGCAACCTTGCACAGTTCTTCGGGAAACGTGCGGACACATTTGCGGGGCGCCTTGTCACGATTCCAAATGCCGTGACCATCCGTGCAAGGAAATAGTCAAGGTATCGTGTCCTTGCGGTCACTTACGTTCCAGCCGAATATGTTCCGAAAACTACCGCGACTACCAAAGAATCGCGACTGGAATTTTAGCGAGCAAAATGGCTGACATTCAACTCGGCCACGCGTCCATAAATCTGAGCGACGTTTTCAACGCGAAAAAGCAAAATCAGCTGAAAACCCTGGAGTGCAACGAAGAGTGTAAGACGATCGAGAGAAATCGTCGCCTTGCTGTAGGGCTGCAAATCGCGAATCCAGACTTGAGTGGAAAACCGACGCCTCGTTACAGCGACAACATGAAGCTGTGGGCCAAGAAAGACCCAAAGTTTTGCCAAATGGTGCATGACAAGTTGACGGAGCTCGTACaaatgtcgaaaaattcgaaactcAAATCGAGAAGCCACTCTTTTGAGTGCATGAATCGAGATAAAAGATGTTTCGTGTACGAGGCTTGCGAGATTTTTGGATGCGAAAGTCAGGCTTACGATCAGGAACCGAATCGCAACATCGTAGCCACGGCTGTCAAAGATAAGTGTTGGCTGCCAAGTTACAGTTTACTGGAATTTGTCCAAAGAGAGAACGGTCAACGAAAAGTGCCTGGGccagttttgaaaaatacgatGGCTTTGACAAGgGGTGCCAATATGCTGCCATTGAACAGTTGGAAGAGCCAAAAGCCTTAA
Protein Sequence
MATWNGMDPEESQDPNYYYYCNQNSHLQNWQYYAQNSQTPYYNNPPSNSAYYQNYNNHYIPEGGPHYHPEPPREKNYPHYQAYHQNRNAESNYKYSNHHQRHPNPRNHVGQRNETPDYHFERKRESRQNFHGNYENAQSQQQNHCPVGNKHNRNYNGGSGRFHSDRHRNDTYNWNSNQYGRSNLAGPSSEERSRRNYNRDKEENRNVREYEDQRLVRSENFGTPGRKWKNSEERVAGGNKSEKYQDKSKEQKSKYINKEKQHHLKNRESKFERKLEKREVAKEREEESTNWRQKSTVESKPSATKKKVFKDQNYDDDASQRERLTDQLNRGRLECLVCCESIRQTNSIWSCSNCYHVLHLKCVEQWAKVSKDDNGWRCPACQNISISAPEDVCFCGKMQCPEWNRNDMAHSCGDVCKRSRTLNDCVHKCTLLCHPGACQPCFAMVTRSCGCKKTSQSVKCSSTALLLCEQVCDQILNCEKHKCAKKCHHGSCGACEEKVKQVCFCGEHSREVSCEKDTPLMYCCGNICNKLLNCNNHNCTEICHEGPCKICPLNPDIVTHCCCQQTLLADKRSSCFDPVPTCDKICSKPLPCGQPSNPHKCKANCHTGDCPKCELTTMVRCRCGHMDKEISCMELVTKADDARCEKKCTKKRDCGKHKCNQMCCIEIDHFCPLPCSKTLSCGRHKCEQTCHSGRCQPCYRSSFEELYCECNTEVIYPPVPCGTKRPSCEKPCSRRHACGHEVLHTCHSNATCPPCAVLTQRLCYCKHELRKAVPCYIKEISCGRPCNKPLPCGKHNCKTLCHAGSCVKQGQTCTQPCTVLRETCGHICGAPCHDSKCRDHPCKEIVKVSCPCGHLRSSRICSENYRDYQRIATGILASKMADIQLGHASINLSDVFNAKKQNQLKTLECNEECKTIERNRRLAVGLQIANPDLSGKPTPRYSDNMKLWAKKDPKFCQMVHDKLTELVQMSKNSKLKSRSHSFECMNRDKRCFVYEACEIFGCESQAYDQEPNRNIVATAVKDKCWLPSYSLLEFVQRENGQRKVPGPVLKNTMALTRGANMLPLNSWKSQKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01215634;
90% Identity
-
80% Identity
-