Basic Information

Gene Symbol
St18
Assembly
GCA_030522825.1
Location
JAPYZL010062407.1:47621-60804[+]

Transcription Factor Domain

TF Family
zf-C2HC
Domain
zf-C2HC domain
PFAM
PF01530
TF Group
Zinc-Coordinating Group
Description
This is a DNA binding zinc finger domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.6e-17 1.9e-13 51.8 4.2 1 29 46 74 46 74 0.97
2 4 3.6e-19 4.1e-15 57.1 8.3 1 29 87 115 87 115 0.98
3 4 2e-17 2.2e-13 51.6 5.2 1 29 132 160 132 160 0.97
4 4 1.6e-19 1.8e-15 58.2 5.1 1 29 193 221 193 221 0.97

Sequence Information

Coding Sequence
ATGACACGAAAAGTCGAGCGTTTGTTCACTTCTGTGTTCACTGTTCGGTACAGTGTGAGCGGTATGAGTATGAGGCAATCAGTGAAATTCGTACCTCGGCCTGCCTTACGTGGTCGTGATGGCAAGGAGCTGATTCAGTGTCCCACGTTCAGCTGCGATGGCATGGGTCATGTCTCGGGAAACTACGCTACCCACAGAAGtatttccgGCTGCCCACGAGCCGATCGTTCCCAAATCCAAGCGCATTCGCAAGAACTAAAGTGCCCGACTCCAGGGTGCGACGGCTCAGGTCACGTGACCGGAAACTACTCGTCCCACAGAAGTTTATCGGGTTGTCCAAGAGCCAACAAGCCCAAAAGCAAACCCCGCGATGGCCAAGACTCCGAACCTCTGAGGTGTCCGATCCCAGGATGCGACGGGTCCGGTCATGCTACCGGAAAATTCTTGTCGCATCGCAGTGCTTCGGGTTGTCCGATCGCGAATCGCAATAAGATGAGAGTTCTGGAATCCGGAGGGACGGTCGAGCAGCACAAGGCAGTTGTTGCTGCTGCGACAGCGATGAAATTCGAGGGCGTCAATTGTCCGACGCCGGGTTGCGACGGAATTGGACACATAAACGGCTCTTTCTCGACTCACAGATCCCTATCGGGTTGCCCGATCGCGGGTCATTCCGTCAGAAAACCCAAGTTCGAGGACATGTCCGTCATGTACAGTAAAGGAATTACCGGGGCAGATTCTGGTGGTCCGGGCGGTCCGGTGAATGTGGCAGCGGTTGCTGGTCAGGGAAATGGCGGTAACGGATCGACAGGGGTTCAGGGCGATAATCTCTATACCCTGGACGCGGAGATAATCGAGCTTCAGAGGGAAAACGCCCGCGTCGAGTCCCAGGTCAATCGCCTGCGCTCGGATATTCACGCCATGGAGTACCAGCTGAAGCAGGGTGACAAGGAGAATATGGTCATATCCCAGCGCAACAGCAACTTCAACGAGTACTACCAATCGCTACGTGAGAACATGATCACGCTGTTGGAGCACGTGCGGATACCAAACGCGCCCGGGGCCCCGCAGGACAAAATGGGTCACGAGAACTTCGACAGTTACTTGACCAAGCTGCAGACCTTGTGCACGGCCGACGGTTACTGCGCCGAGGAGAACCAGAGGCCGATCTACGAGACCGTGAAAACCGCTCTCCAAGACTTCACCGTGCTGCCCACGCCCATCTGA
Protein Sequence
MTRKVERLFTSVFTVRYSVSGMSMRQSVKFVPRPALRGRDGKELIQCPTFSCDGMGHVSGNYATHRSISGCPRADRSQIQAHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPIANRNKMRVLESGGTVEQHKAVVAAATAMKFEGVNCPTPGCDGIGHINGSFSTHRSLSGCPIAGHSVRKPKFEDMSVMYSKGITGADSGGPGGPVNVAAVAGQGNGGNGSTGVQGDNLYTLDAEIIELQRENARVESQVNRLRSDIHAMEYQLKQGDKENMVISQRNSNFNEYYQSLRENMITLLEHVRIPNAPGAPQDKMGHENFDSYLTKLQTLCTADGYCAEENQRPIYETVKTALQDFTVLPTPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01418667;
90% Identity
iTF_01215608;
80% Identity
-