Basic Information

Insect: Platygaster orseoliae
Gene Symbol: -
Assembly: GCA_030522825.1
Location: JAPYZL010077493.1:5333-10733[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.049 11 8.3 4.8 1 21 123 143 123 146 0.86

2 22 1.3 3e+02 3.8 6.0 2 23 156 178 155 178 0.94

3 22 0.0022 0.5 12.5 0.2 1 20 271 290 271 292 0.96

4 22 0.0052 1.2 11.3 0.6 1 23 299 322 299 322 0.96

5 22 0.018 4.2 9.6 2.8 2 23 335 357 334 357 0.92

6 22 0.021 4.9 9.4 1.2 2 23 713 735 712 735 0.96

7 22 4.7 1.1e+03 2.0 0.6 5 23 742 760 741 760 0.93

8 22 1.8 4.2e+02 3.3 1.1 2 23 767 788 767 788 0.97

9 22 0.0026 0.58 12.3 0.6 1 21 998 1018 998 1019 0.93

10 22 4.6 1.1e+03 2.1 3.6 2 19 1027 1044 1026 1049 0.90

11 22 0.37 85 5.5 7.6 1 23 1059 1082 1059 1082 0.94

12 22 0.88 2e+02 4.3 0.3 2 21 1106 1125 1105 1126 0.91

13 22 0.17 40 6.5 0.5 3 23 1135 1156 1134 1156 0.92

14 22 0.00016 0.036 16.1 0.4 1 23 1167 1190 1167 1190 0.96

15 22 0.26 59 6.0 0.0 1 19 1223 1241 1223 1243 0.94

16 22 3.5 7.9e+02 2.4 0.4 1 13 1251 1263 1251 1274 0.83

17 22 0.0017 0.39 12.9 0.5 2 23 1380 1401 1379 1401 0.94

18 22 0.059 13 8.0 1.0 1 23 1411 1434 1411 1434 0.93

19 22 0.0011 0.25 13.5 1.9 1 21 1514 1534 1514 1535 0.95

20 22 7.6 1.7e+03 1.4 6.9 1 23 1544 1566 1544 1566 0.95

21 22 5.7 1.3e+03 1.8 0.8 1 10 1575 1584 1575 1598 0.77

22 22 7.5 1.7e+03 1.4 0.2 2 17 1685 1702 1684 1703 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.049	11	8.3	4.8	1	21	123	143	123	146	0.86
2	22	1.3	3e+02	3.8	6.0	2	23	156	178	155	178	0.94
3	22	0.0022	0.5	12.5	0.2	1	20	271	290	271	292	0.96
4	22	0.0052	1.2	11.3	0.6	1	23	299	322	299	322	0.96
5	22	0.018	4.2	9.6	2.8	2	23	335	357	334	357	0.92
6	22	0.021	4.9	9.4	1.2	2	23	713	735	712	735	0.96
7	22	4.7	1.1e+03	2.0	0.6	5	23	742	760	741	760	0.93
8	22	1.8	4.2e+02	3.3	1.1	2	23	767	788	767	788	0.97
9	22	0.0026	0.58	12.3	0.6	1	21	998	1018	998	1019	0.93
10	22	4.6	1.1e+03	2.1	3.6	2	19	1027	1044	1026	1049	0.90
11	22	0.37	85	5.5	7.6	1	23	1059	1082	1059	1082	0.94
12	22	0.88	2e+02	4.3	0.3	2	21	1106	1125	1105	1126	0.91
13	22	0.17	40	6.5	0.5	3	23	1135	1156	1134	1156	0.92
14	22	0.00016	0.036	16.1	0.4	1	23	1167	1190	1167	1190	0.96
15	22	0.26	59	6.0	0.0	1	19	1223	1241	1223	1243	0.94
16	22	3.5	7.9e+02	2.4	0.4	1	13	1251	1263	1251	1274	0.83
17	22	0.0017	0.39	12.9	0.5	2	23	1380	1401	1379	1401	0.94
18	22	0.059	13	8.0	1.0	1	23	1411	1434	1411	1434	0.93
19	22	0.0011	0.25	13.5	1.9	1	21	1514	1534	1514	1535	0.95
20	22	7.6	1.7e+03	1.4	6.9	1	23	1544	1566	1544	1566	0.95
21	22	5.7	1.3e+03	1.8	0.8	1	10	1575	1584	1575	1598	0.77
22	22	7.5	1.7e+03	1.4	0.2	2	17	1685	1702	1684	1703	0.86

Sequence Information

Coding Sequence: ATGTTCCTTGGCAgatttaacagaaaaaaaaaaacgccgGAATCGGCTAATAAGCCATCCAACTCATCACTGCAAGATTTTCGCACCCGCGCTTCCAGCACGAGTGATCCTAGCGTCATCGTCCGTCAATATAGAAAGCGAAAATCTAAATCTGAGACTCCGCTGGAAAATTCGTTGGATGAAGATGAGAACGAGGATACTGATAGgacgaaaaaatacaaagagAATTCATCTACAGCTTCCAAGAAAAAGCCAGAAAAAGTAGGTGTAGAAAAACCGGTTTTCCAATGTTCCATATATGACGTGGCATTCACTTGCAAGGCATCATTGGAAGCCCACACTGCACGGTACAGAACCACCGGTAAGCATAAGTGTCCTAAGTGTGATATCTGTTTCGTTAACTCTCGAGACTTGCGATGCCACTCCAATGGTGCACATTCGAGCAGAGACCCTAAATGGCCTCTAAACTGCAAAATATGTCACCAAAAATTTCTACATGTTGAAAACTTACAAACTCACGTGAAACATTATCATCAGAATATCAAGAAATTGAACGAGAAATCCACCCCGAAATTGCGAGATAATGAAAACGTAAGTTCTAAAGTGCTGAACAATCTTAGAAACTCTCCGCGCAAAAGTAACGAGCAAACACACAAGAAAAAAGATTCTCAGGAATCCCGAACTGATTCGACAGCAGATACATCCATGAAAGTAAATGGAGATATTGGCGATAAACAGAAAGAAGGCATGGAAAAGCCAGCTGAggctgagaaaaaaatgtcagaCACACAACTTCCGAAAAAAGTTGTCTACCAATGCGACACTTGCGGCTTGGAATTCTATAAGGAGTCGTCAATGAAAAACCACATCGCTCAGTACAGTAGCAACGGAAAATTTGCGTGTTCTACATGCGGAATCAGCTTTTTTTATGCACGAGATCGACGTCGTCATGAGAGGAGCGCTCACAAAACACATGATCCTGAAAAACCTACGAATTATATGAGTTGTCAACTATGTCAGCAAAATTTtaagtatgaagaaaatttgcatGCACACATGGTGCATTACCATATTGAAGTTGTTGAATCAAACGAGAAATCCAAGATGACTTTGAAGTATAAAGAGAAGACTTCCAGTATGAATCATTCAGACAGAAAAACGAATGAACAAAAGAAAATGTCTGTTTCCCAAACCAGTACGAAACAGAACTTTATAAATCATTCAGAGAAAAAAACGAATGAGCAAAAGAAAATGTTTGTTTCTCCAACCAGCACGAAACAGAACGTTATGGATAATCGAGACAAAAAAAACGACGCAGAAAAGAAAGTTTCAATTTCTCCAATAACTTCGCCGCAAGCGCCAAAACAAACTATCAAAAAAGAGATTCAGACTATATTGACTGACTATCTGATAAAAACTCCTGCAAAACCATCCCCGGAATCAAGGAAAGCAGAAACGTCTACCAACGAATTAGGCCCCATTCGGAACTCACCGGCGCAAATTCAAGTTTACTCTCAAACAGTGGAGGTCAGAGAAAAATCCATATCACCCACTGAATCACCTGTCCAATTTATGGGCCACATAAACGAAGAAATCCATGTGGATTCTAACGAGCCTTATAAAACACCTTCAGAAACAGATAAAAGTTGGAGACAAAAATACGAATGTCAGgaatgttttgtaaaaatatctAATCCAAATCTAAATATGAAAATGGAGATTGAAGATTCTATGAATGACGCAGGAAAAGAAATTCAGAACGAGCTCTCGCAAGAAAATAACATCGGCAATGATTCTCTGCGAACTCCCGTGAACAACTGTGCCGAAGAAAATACTCTCGATGAAGTTTTCGAAGAAAGTATGGAGATTGATTACCAAGAAGCCATGGACGTTGATGACGTAGGAGGCATACTTGAAGATCCACAAGAAGAATCTTCCGATGCAAGTTCCAGTGAACTATCTAAACAAGATTATGCAGAAACAGAGCTTGCAGAAAAGAAACGCACGGAGGATAAACTTCActccaaaaaatatattgtaaagcTGACGAAATTAGATAACTTTGCACTTCCGACCAGCGTAGAACTTCCGGAAAAACTTGCCGATCCGAGTGTAGTGGGAGAAACTTCTGGCATAACATGCAACATCTGCAAGTTAacttttaataatgaaaataaatgggAGCTCCACAAGAAAAAGTCCCATTACGCTTACAAATCGACAATCTGTCAGGCTAGATTCACCTGCCAATCGAAACTTATTACCCATTACTTAGAGCACATACCATCCAACAATCGCCAATGTTGTGTCTGCGGAGAAGCGATGGAGAATGCTCGAGTCTTATACCATCATCTTAAAATACACTGCCTTGAAATCGATCAAACCGTTGATGGACCCATGAACATGGCAATTACGTGTACTTTAAATAGAAAAACTTTTCGATGCGTGTGTGGTCTACAATGCGAAAATGAGTTAGAATACAAGGATCACACCCAGAGCTGCATAGAATGGACTAAAGCCCATTACGTCGCTTTTGACTACAAAATGCCTTACTCTTCTGTAATCAGCAAAAATGTACCATCGATCGTTCTCAAAGACTCGAAAAGTGCAACGCCTAGCGACGACAGCGAAGATGAAAGCAACGATAAAGAATATCTTCATTCTGATGGGAGCGATTCTGAAACATTGAGCGTTCAATCAGAGTCggttttcatagaaaaatattatcCTCTGCGATCGAGAAATTCAGGCCTGGATCTGGACTTGAAGAGGGTCaagaaaaatacagaaaaccGAAGCCTTAGGTCAAATTCAGGTTTAGAAAAAGAAGATCCCCTGCAATCAAGCAGTCCAGCGACTTCGGACAGTACAACGCGATCTGGAAGAACATCGAAAAGCGTAATTTCATCACAGGAAGGTAATTTCGTCTTTTTGCCGCAGGAAGAAGCAAGGAAACAAGATGAAAAACCTGGATCTCTGAAAACTCAAAGTTACCCGTGCCTTGTCTGCGGTACGAAATTTCAGAACTACGATAACTACAAGAAACACGAGCAAAGTTATTCGAAAGAGTTCAACGATGAATGCGTACACTGTCATTACAAGTTCCCGGGGAAAATTTTGCTGAGGTACCACTGTCAAGCGACGCACGACACAGAAAATGTGAGAAACTACGTGTTTCATTGCCCAATGTGCTACCaaggatttttcagaaaatgcaCCTTGAGAATGCACATGACCCACATACACCTTGTACAATGGGACAATTCCATGGCGAAGCCATGGACATACCAGAGCGTCGATACACCAGATATCCTCAAGTGTGAAGAAtgcagtatcgaatttgaaacgGCTGAAGACTGCAAGGCTCATCGTAACTTGTACAACAAAGACCTCCAGCGTTACTGTGCAGAATGCAAAATCACGTTTCAAGGTGCATACCTTTTGAAGCAGCATAACAAACTGTTCCATTTGAGTCAAGGAGCCATGGTGAAATATAGATATCCATGCAACACTTGCGGCGAAGGTTTTGAGAATGAAAATACGCTCAACTCACACATGCTTCACGTGCACGTAGTTCAGAAAGAACAAGAAAAGGAGCTACTGTTTGATTCATTAAtggaaaatattgatattattacgCTTGAGACGACAAACAACTCCGAAGACTTTACTTGCCAAGTTTGCAATTTGATTTTCGAAACTGTCGAGAGTATGGAGGCGCACGAAGACCAAATTACTAATAATGGAGAATTCCAGTGTGACATGTGCTACAAAAGATGCATAAACGCTGCTGTACCAGCTAACCACCAGGAGTTGACCCACTTTTCAAAGGAGGAACATCCAAATTACAAGTGTACGACTTGCGAAGAAGTGCTCCGACTGATCCGAGAACCATTGATAACTTTGCGAGTAACGGACAATCATGTAGTTTTAGCACCCGAGACACCAGCTGAAACACTCcctcaagaaataaaaatcggGAAAGAGCTTGCAGTGAAAACTCCCTCATTGGTTGTTACTGCGTGTGAGAAAACTCCTTCCCCGCCGAGATTACTGAAATGCGAAACGTGTCATGTATTGTTCACCGAGGAGGAAATGCAGAATTTTTTGGCAGAGTTCCTGAACGACGGAGATTTGCCGTGCTCTCTATGCTCCAGGCGATTTGTCTCGGAAAATAATCTGCGAGCTCACAAGGTGAAGCATACGATGAAATTCCTGGCTAATCATCCGTTCAAGTGCATTTATTGCGACGAAGGCTTTGAAAGTCACGGACAGTTGGCAATGCACCAGGCCCACATCCACCGACAGGTGCTGCCGAGGAACCCCGTTCCACCTAGCCTCcctcaaaaaagttttgaagagATAGTGCAAGTCTGCCTCGACGACAAAACCACAATTTACATCAAAGTCGCGCTTGGCCCGAACGTCTATGGTAGTAGCAACTATCCATCATTGCAGGACAATAACTTGCAAACATTCATAGCGACTCTCTTCACTGACTACCACGCCAGGTATCCAGTAGCCGGTATACAGTCTGGATTTCAATGCCAGATCTGCAAGCTCACTTTTCTGAACCGCCATAATCTCCAGAAACACATGGATCGGTACATGAAGGAAACTGCCTCATCGCACAATTGCAACTTCTGTAGTAAGCGATTCCGCTGGATAGCGTGTTTGGAAGATCACATCTGCAAGCACTTTAATATCAACATTAACAGAGTCTTCACGTGCACCATTTGCAAGGAGACTTACCTCACGGAAATTTCTCGCTTCGCGCATGTGGCACACTTCCACCCTGAACGGAACACTATTTTGCGTGGCTTGCTGGCGATAAAAGAACAAAAACAGCAAAAACTCAATTCTCGGAGTCCTCAGGTCAAAGAGGCATCCATTGGTGAGCGTATCCAGCACAACTTTGAGCAAGATTCCGATCAAAATGATATCCAAATCGTGCATGAAACATCTGGAATGCCAAGTCACTCCAGGGCCCCAGATATGCcgaattcagaaaattccaTAGCGTACACCGAACAAACAACGGATAAGGTTCTCATGTGCCCCGTAATCACCTgtcaaaagtttttcttttcatCGGAAGATTACCGTCAATACGAAGCAATCTGCAAGAGCTTTCACTGCTAA
Protein Sequence: MFLGRFNRKKKTPESANKPSNSSLQDFRTRASSTSDPSVIVRQYRKRKSKSETPLENSLDEDENEDTDRTKKYKENSSTASKKKPEKVGVEKPVFQCSIYDVAFTCKASLEAHTARYRTTGKHKCPKCDICFVNSRDLRCHSNGAHSSRDPKWPLNCKICHQKFLHVENLQTHVKHYHQNIKKLNEKSTPKLRDNENVSSKVLNNLRNSPRKSNEQTHKKKDSQESRTDSTADTSMKVNGDIGDKQKEGMEKPAEAEKKMSDTQLPKKVVYQCDTCGLEFYKESSMKNHIAQYSSNGKFACSTCGISFFYARDRRRHERSAHKTHDPEKPTNYMSCQLCQQNFKYEENLHAHMVHYHIEVVESNEKSKMTLKYKEKTSSMNHSDRKTNEQKKMSVSQTSTKQNFINHSEKKTNEQKKMFVSPTSTKQNVMDNRDKKNDAEKKVSISPITSPQAPKQTIKKEIQTILTDYLIKTPAKPSPESRKAETSTNELGPIRNSPAQIQVYSQTVEVREKSISPTESPVQFMGHINEEIHVDSNEPYKTPSETDKSWRQKYECQECFVKISNPNLNMKMEIEDSMNDAGKEIQNELSQENNIGNDSLRTPVNNCAEENTLDEVFEESMEIDYQEAMDVDDVGGILEDPQEESSDASSSELSKQDYAETELAEKKRTEDKLHSKKYIVKLTKLDNFALPTSVELPEKLADPSVVGETSGITCNICKLTFNNENKWELHKKKSHYAYKSTICQARFTCQSKLITHYLEHIPSNNRQCCVCGEAMENARVLYHHLKIHCLEIDQTVDGPMNMAITCTLNRKTFRCVCGLQCENELEYKDHTQSCIEWTKAHYVAFDYKMPYSSVISKNVPSIVLKDSKSATPSDDSEDESNDKEYLHSDGSDSETLSVQSESVFIEKYYPLRSRNSGLDLDLKRVKKNTENRSLRSNSGLEKEDPLQSSSPATSDSTTRSGRTSKSVISSQEGNFVFLPQEEARKQDEKPGSLKTQSYPCLVCGTKFQNYDNYKKHEQSYSKEFNDECVHCHYKFPGKILLRYHCQATHDTENVRNYVFHCPMCYQGFFRKCTLRMHMTHIHLVQWDNSMAKPWTYQSVDTPDILKCEECSIEFETAEDCKAHRNLYNKDLQRYCAECKITFQGAYLLKQHNKLFHLSQGAMVKYRYPCNTCGEGFENENTLNSHMLHVHVVQKEQEKELLFDSLMENIDIITLETTNNSEDFTCQVCNLIFETVESMEAHEDQITNNGEFQCDMCYKRCINAAVPANHQELTHFSKEEHPNYKCTTCEEVLRLIREPLITLRVTDNHVVLAPETPAETLPQEIKIGKELAVKTPSLVVTACEKTPSPPRLLKCETCHVLFTEEEMQNFLAEFLNDGDLPCSLCSRRFVSENNLRAHKVKHTMKFLANHPFKCIYCDEGFESHGQLAMHQAHIHRQVLPRNPVPPSLPQKSFEEIVQVCLDDKTTIYIKVALGPNVYGSSNYPSLQDNNLQTFIATLFTDYHARYPVAGIQSGFQCQICKLTFLNRHNLQKHMDRYMKETASSHNCNFCSKRFRWIACLEDHICKHFNININRVFTCTICKETYLTEISRFAHVAHFHPERNTILRGLLAIKEQKQQKLNSRSPQVKEASIGERIQHNFEQDSDQNDIQIVHETSGMPSHSRAPDMPNSENSIAYTEQTTDKVLMCPVITCQKFFFSSEDYRQYEAICKSFHC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -