Pors039266.1
Basic Information
- Insect
- Platygaster orseoliae
- Gene Symbol
- -
- Assembly
- GCA_030522825.1
- Location
- JAPYZL010135737.1:1-6688[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.46 1.1e+02 5.2 0.3 2 20 105 123 104 125 0.91 2 27 0.05 11 8.2 4.6 1 21 132 152 132 155 0.86 3 27 0.3 69 5.8 0.0 2 20 277 295 276 296 0.91 4 27 0.1 23 7.3 1.9 1 23 304 327 304 327 0.94 5 27 0.41 94 5.4 1.7 2 23 340 362 339 362 0.92 6 27 5.9 1.3e+03 1.7 0.2 2 12 567 577 566 582 0.84 7 27 6.3 1.4e+03 1.6 0.4 5 23 596 614 595 614 0.93 8 27 0.0014 0.31 13.2 1.2 1 21 900 920 900 921 0.95 9 27 1.9 4.3e+02 3.3 1.3 2 19 929 946 928 949 0.94 10 27 1.2 2.7e+02 3.9 8.6 1 23 961 984 961 984 0.94 11 27 0.42 96 5.3 0.4 2 21 1008 1027 1007 1028 0.91 12 27 0.83 1.9e+02 4.4 1.6 3 23 1037 1058 1036 1058 0.93 13 27 0.00069 0.16 14.1 0.4 1 23 1068 1091 1068 1091 0.96 14 27 1.5 3.4e+02 3.6 0.2 2 20 1173 1190 1172 1192 0.89 15 27 0.0021 0.47 12.6 0.9 2 23 1200 1221 1199 1221 0.94 16 27 0.0043 0.99 11.6 2.7 1 23 1231 1254 1231 1254 0.94 17 27 0.00076 0.17 14.0 2.5 1 22 1305 1326 1305 1326 0.96 18 27 0.33 74 5.7 2.5 1 23 1335 1357 1335 1357 0.95 19 27 9.1 2.1e+03 1.1 2.4 1 21 1366 1386 1366 1389 0.80 20 27 0.33 76 5.7 0.1 2 19 1476 1495 1475 1498 0.91 21 27 0.0084 1.9 10.7 2.2 1 23 1502 1525 1502 1525 0.95 22 27 0.13 30 6.9 0.1 2 19 1662 1679 1661 1681 0.95 23 27 0.52 1.2e+02 5.1 0.3 2 23 1688 1709 1687 1709 0.96 24 27 0.38 86 5.5 0.1 3 21 1714 1732 1712 1733 0.94 25 27 4.4 1e+03 2.1 0.0 6 23 1769 1786 1767 1786 0.95 26 27 0.043 9.9 8.4 0.1 2 23 1813 1835 1812 1835 0.96 27 27 0.76 1.7e+02 4.5 2.8 1 23 1838 1861 1838 1861 0.96
Sequence Information
- Coding Sequence
- GTAACTCATTTATGGACCATAGCATCGCTGGAAGAAGGTTCTTATAATGAACCTACGGGATGTTCCGTGCCAGATTTAACAGAGCAAAATACCCCGGAATCAGTTGATAAGCCATCCAACTCATCACTGCAAGATGTTCGCACCCGCGCTTCCAGCACGAGTGATCCTAGTGTTGTCGTCCGTCAATATAGAAAGCGAAAATTTCAATCTGTAACTCCGCTGGAAAATTCGTCGGATAAAGATGAGAACGAGGATTCATCTACAGCTTCCAAGAAAAAGCCAGAAGATGCAGGTGTGGAAAAACCGGTTTCCAAATGTTCCATATGTGACGCGGCATTCACTTGCGAGGCATCATTGGAAGCCCACACAACACGGTACAGAACCACCGGTGAACATAAGTGTCCTAAGTGTGATATCTGTTTTGTTAACTCCCGAGACTTGCGATGCCACTCCAATGCAGCACATTCGAGCGGAGACCCTAAATGGCCTCTAAACTGCAGAGTATGTTACCAAAAATTTCTACatgttgatgattttttttcccacGTGAAACATTATCATCAGAATATTAAGAAAACGAAAGAGAAATCGACCCATACATTGAGGAATAATGTAAGTTCTGAAGTACTGAACAATTCTATCAACTCTCCGCGCAAAAGTAACGAGCAAACAGACAAGAAAAAAGATTCTCGGGAATCCCGAAATGACTTGACAGCAGATGCATCCACGGAAGAAAATGGAGATATTGGCGATAAACAGAAAGAGGGCCCGGAAAAGCCAGCTGAGGCTGAAAAAACAGACACACAATCTCCGAAAAAAGTTGTCGGCAAATGCAACATTTGCGGCTTGAAATTCTATGAGGAGCCGTTAATGAAAGACCACATCGTTGAGTTTAGTAGCAACGGAAAATTTGCGTGTTCTACATGCGGAATCAGCTTTTTTTATGAACGAGATCGACGTAGGCATGAGAAGTACTTTCACAGAACACATGatcctgaaaaatttatgaattatgtgACTTGCGAACTATGCCAGCAAATTTCCAAGTATGAACAAAATTTGCATGCACATATGGTGCATTACCACGATAAAGCTGTTGAATTAAACGAGAAATCCGTGATTACTTTGAAGAATAAGGATAAGATTTTCAGTGAGAATCATTCagacaaaaaaagaaatgaacaaaaaaaaatgtctgtttCCCCAAACAGTACGAAACAGAACGTTACGAATCATTCAGACAAAAAAATGAATGAGCCAAAGAAAATGTTTGTTTCTCCAAGCAGCAGGAAACAGAACGTTATGGATAGCCGAGACAAAAAAACCGACGCAGAAAAGGAAGATTCAATTTCTCCAATAACTTCGCCGCAAGCGCCAAAACAAACTCAGGAAAGAACCATAAATCAGAATTACGAAGAAAGTATGGAGATTGATCACCAAGAAGACATGAACGTTGACGACGTAGGAGGCATACATGAAGATCCACAAAAAGAATCTTCCAATACAAGTTCCAGTGAACTATCTAAACAATATTCTGTAGAAACAGAGCTTGCAGAAAAGAAACGCACGGAGGATAAATTTCACtccaaaaaatgtattgttaAGCTGACGAGATTGGATAACTCTGCACTTCCGACTAGTGTAGAACTTCCAGAAAAACTTACCGATCCGAGTGTAGTGGAAAAAACTTCTGGCATAACATGCAACACCTGCAAGTTGACTTTTGATAACGAAAATAAATGGGAGCTCTACAAGAAAAAGTCCCATTACGCTTACAAATCGACAATCTGCCAGGCTAGATTCACCTGCCAATCGAaacttattattcattatttggAGCACATACCATTCAGCAATCGCCAATGCTGTGTCTGCGGAGAAGCGATGGAGAATGTCCGAGTCTTATACCATCATCTTAAACTACATTGCCTTGAAATCAGTCAAACCGTCGATGGACCCATGAACATGGCAATTACGTGTAGTTTAAATCGAAAAACTTTTCGATGCGTGTGTGGCCTACAATGCGAAAATGGATTGGAATACAAGGAACACACCCAGAGCTGCATAGAATGGACTAAAACCCATTACGTCGCTTTTGATTACGAAATGCCTTACACTGTTGTAATCAGCAAAAATGTACCATCGATCGTTCCCAAAGACTCGAAAAATGCAACTCCCAGCGACGACAGCGAAGATAAAAGCAACGATAAAGAATATTTTCATTCTGATAGGAGCGATTCAGGAACCTTGAGCGTCCAATCAGAGTCGGATTTAATAGAAAAAGATTATCCTCTGCAATCCAGAAATTCAGGCCTGGATCTGGACTTGAAGACTGTCAAGAACAATACAGAAAACCAAAGCCTCAGGTCAGATTCAGGTTTAGAAAAAGAAGATCCTCTGCAATCAAGCAATCCAGCGACTTGGGACAGTACAACGCGATCTGGAAGAACATCGAAAAGCGTAAAACACTACCTGTCTCCCATAGACTCTTTTAAAAAACAGGACAAATCAGAAGCAGTGCCAAAACCTgcgaaaaatacagaaaacaaAAACCGGAAGAATTCAACAAACGAGACTACCACAACATCTTCGACAACCTTCCAGGTCATTTCATCGCAGAAAGGTGATTTCGTCTTTTTGTCCCAAGAAGAAGCAAAGAAAGAAGATGAAGAACCTGGATCGTCTAGAACTCAAAGTTACCCGTGCCACGTCTGCGGTATGAAATTTCAGGTTTACGATAACTACAAGAAACACCAGCAAAATTATTCGAAAGAGTTCAACGATGAATGCGTACACTGTCATACCGCGTTCCCGGGGAAAATTTTGCTGAGATACCACTGTTATGCGACGCACAACACAAAAAAGGCGAGAAACTACGAGTTTCATTGCACAATGTGCAAccaaggatttttcaaaaaatgcaccTTGAGAATGCACATGACCCACATACACCGTGTACAATGGGACGATTCCATGGCGGAGCTAGGGACACACCAGAGCGTCGATACACCAGATATCCTCAAGTGCGAAGTAtgcagtatcgaatttaaaacgGCTGAAGACTGCAAGGCTCATCGTAACTTGTACAACAAAGACCTCCAGCGTCACTGTGCAGAATGCAAAATCACGTTTCAAGGTGAATACCTTTTGAAGCAACATAGCAAACTGTTCCATTTGGGTCAAGGAGCCATGAAGTATAGATACCCATGCAACACTTGCGGCGAAGGTTTTGAGAACGACAATACGCTCAACTCGCACATGCTTCACGTGCACGTAGTTCAGAAAGAACAAGAAAAGGAGCTATCGTTTGATTCATCAATGGAAAATAATGATGTTACGCTTGAGACGGCAAACAACTCCGAAGACCTTACTTGCCAAGTCACACCAGAGACATCATCAGAGACACCAGCTGAAACATTCCCTCAAGAAATAACAACTAGGAAAGAGCTTGCAGTGAAAACTCCCTCATTGGTTGCTACTGCATGTGAGAAAACTCCTTCCCTGCCAAGACTACTGAAATGCAAAACATGCCGTGAATTTTTCACCGAGGAGGAAATGCAGAATCACTTGGCAGAATTCCTGAACGACGGAGATTTGCGGTGCTCTATATGCTCCAGGCGATTTTTCTCGGAAAATAATCTGCGAGCTCACGAGGTGAAGCATACGATGAAATTCCTGGCTAATCATCCTTTCAAGTGCACTTTTTGCGACGAAGGCTTTGAACGTCACGGACAGTTGGCAATGCACCAGACCCACATCCACCGACAGGCGTCGCCGAGGAACCGTCCTCCACCTAGCCTCcctcaaaaaagttttgatgaGATAGTACAAGTCTGCCTCGACGACAAAACCACAATTTACATGAAAGTCGCGCTTTACCCGAACGTCTATGTAGCTGGTATACAGTCTGGATTTCAATGCCAGATCTGCAAGCTCACTTTTCTGAACCGCCATAATCTGCAGAAACACATGAATCGGTACATGAAGGAAACTGCCTCAGCGCACACTTGCAACTTCTGTAGTAAGCGATTCCGCTGGATAGCGCGTTTGGAAGATCACGTCCGCAAGCACTTTAACATCAAAATTAACGAAGTCTTCACGTGCGCCATTTGCAAGGAGACTTACGTCACGGAAATTTCTTGCTTCGCGCACGTGGAACACTTCCACCCTAAAGAGAACACTATTTTGCGTGGCTTGCTGGcgatagaaaaagaaaaaccgcaaaatataaattctcgGAGTCCTCAAGTCAAAGAGGTATCCCTGCTTGAGTGTATCCAGCACAACTTTGAGCAAGATTCCGATAAAAATGATATCCAAAACGCGCATGAAAAATCTAGAACGCCAAGTCACTCCAGGGCCCCAGATATgccgaatttgaaaaattcccaaGCGTGCGCCAAACAAACAACGGATAAGGTTCTCATGTGCCCCGCAGTCACCTGTAAAAAGTCTTTCTTTCCATCAGAAGATTACCGTCAACACGAAACAATCTGCAAGAGATTTCACTGCCAATTATGCAAAATGATATTCAACACTGAAATTTCTCTCAAGACTCACATGGAATACATGCACAGAAACGTGGGTCCCATACAACCCGCTCCCGTAGTTGTGGAAGCTGCGAGCAAGCAAACGCCAGCCCAGGAAAACAAGGGTCAAGCCGGTATGGAACTGGTCGGTCGTTTGAGAGTCAAGTCCTTCGCCAAGCTCATAGATAACCAAGAACAAGATCCGCTCAGACTCGCAAGACCATCAGCCCCACTTCAGCGACTGGATCGGTTGCTCCGGACAGCTAGCATCAGTTTCACCCAAACTCCTTCCGCAGCGAATCACCCTGGCAAATCAATTAAATCGACTCTGAAAGCGCTAGGCGCCACGAAAAGGGTCGTTCTGAACCCTTTGACAGAATTTTACAAACGCTCGATCATCACAAACATGAATAGACTCATCGACGGACAGCCACCCAAGACCCAGATCCCCGTGCAGTGCAAGATCTGCCAAGTCATGTTCTCTGGCGGATACCAGCTCACGCAGCATTTCGCTCTTAAGTGCTGGATCAATCGCTGCTTCATCTGCAATCAAATGATGCCGTCAAAGGAAGCTTTGCAGTACCACGTGTACATGCACATTGACATCATCTGCCAAGTCTGCGGCGCCAAATTTCTTGACAGGAAGTACTTTTTCCTGCACATGCGTGGATGTGTGGACAATTTCAAGGCAAACTGCGCGTCTCCTGAACCAATTGTTGCGAACAACTCCAGTACTGGTAACATTCAGCAAGGCGTGCCGCCTCCGAGCCTCAGCTGTAACACCGTACTCCCAAGCTTCCAGGAACTCAATGATCACCTCAAGGTTCACTGCACGGGCCAAGAAGACATCGCGAGCACCTCCAGAAACACTGACGTTCTGGACGGGCGAGAGCTGCTAAGAGGCGTCAGCTGCGGCATCtgcagaaaaattttccctAGTGTGTCAAAGATCGCGGAGCACCTCAACACTGAGCACAATAATTACAAATGCGATGCTTGCAAGCACAAGTTTTACTCCAAGAAGGTAATAATCCTTCACATGATACGGCGACACAGCGTTAACGAACAGGATATTCACTTTTGCTACGCTTGTAAAACAGGTTTTCTACTGAAGACTGAGTTTGAGCGTCATCCCTGTTCCCCAAATAACAACGCgtaa
- Protein Sequence
- VTHLWTIASLEEGSYNEPTGCSVPDLTEQNTPESVDKPSNSSLQDVRTRASSTSDPSVVVRQYRKRKFQSVTPLENSSDKDENEDSSTASKKKPEDAGVEKPVSKCSICDAAFTCEASLEAHTTRYRTTGEHKCPKCDICFVNSRDLRCHSNAAHSSGDPKWPLNCRVCYQKFLHVDDFFSHVKHYHQNIKKTKEKSTHTLRNNVSSEVLNNSINSPRKSNEQTDKKKDSRESRNDLTADASTEENGDIGDKQKEGPEKPAEAEKTDTQSPKKVVGKCNICGLKFYEEPLMKDHIVEFSSNGKFACSTCGISFFYERDRRRHEKYFHRTHDPEKFMNYVTCELCQQISKYEQNLHAHMVHYHDKAVELNEKSVITLKNKDKIFSENHSDKKRNEQKKMSVSPNSTKQNVTNHSDKKMNEPKKMFVSPSSRKQNVMDSRDKKTDAEKEDSISPITSPQAPKQTQERTINQNYEESMEIDHQEDMNVDDVGGIHEDPQKESSNTSSSELSKQYSVETELAEKKRTEDKFHSKKCIVKLTRLDNSALPTSVELPEKLTDPSVVEKTSGITCNTCKLTFDNENKWELYKKKSHYAYKSTICQARFTCQSKLIIHYLEHIPFSNRQCCVCGEAMENVRVLYHHLKLHCLEISQTVDGPMNMAITCSLNRKTFRCVCGLQCENGLEYKEHTQSCIEWTKTHYVAFDYEMPYTVVISKNVPSIVPKDSKNATPSDDSEDKSNDKEYFHSDRSDSGTLSVQSESDLIEKDYPLQSRNSGLDLDLKTVKNNTENQSLRSDSGLEKEDPLQSSNPATWDSTTRSGRTSKSVKHYLSPIDSFKKQDKSEAVPKPAKNTENKNRKNSTNETTTTSSTTFQVISSQKGDFVFLSQEEAKKEDEEPGSSRTQSYPCHVCGMKFQVYDNYKKHQQNYSKEFNDECVHCHTAFPGKILLRYHCYATHNTKKARNYEFHCTMCNQGFFKKCTLRMHMTHIHRVQWDDSMAELGTHQSVDTPDILKCEVCSIEFKTAEDCKAHRNLYNKDLQRHCAECKITFQGEYLLKQHSKLFHLGQGAMKYRYPCNTCGEGFENDNTLNSHMLHVHVVQKEQEKELSFDSSMENNDVTLETANNSEDLTCQVTPETSSETPAETFPQEITTRKELAVKTPSLVATACEKTPSLPRLLKCKTCREFFTEEEMQNHLAEFLNDGDLRCSICSRRFFSENNLRAHEVKHTMKFLANHPFKCTFCDEGFERHGQLAMHQTHIHRQASPRNRPPPSLPQKSFDEIVQVCLDDKTTIYMKVALYPNVYVAGIQSGFQCQICKLTFLNRHNLQKHMNRYMKETASAHTCNFCSKRFRWIARLEDHVRKHFNIKINEVFTCAICKETYVTEISCFAHVEHFHPKENTILRGLLAIEKEKPQNINSRSPQVKEVSLLECIQHNFEQDSDKNDIQNAHEKSRTPSHSRAPDMPNLKNSQACAKQTTDKVLMCPAVTCKKSFFPSEDYRQHETICKRFHCQLCKMIFNTEISLKTHMEYMHRNVGPIQPAPVVVEAASKQTPAQENKGQAGMELVGRLRVKSFAKLIDNQEQDPLRLARPSAPLQRLDRLLRTASISFTQTPSAANHPGKSIKSTLKALGATKRVVLNPLTEFYKRSIITNMNRLIDGQPPKTQIPVQCKICQVMFSGGYQLTQHFALKCWINRCFICNQMMPSKEALQYHVYMHIDIICQVCGAKFLDRKYFFLHMRGCVDNFKANCASPEPIVANNSSTGNIQQGVPPPSLSCNTVLPSFQELNDHLKVHCTGQEDIASTSRNTDVLDGRELLRGVSCGICRKIFPSVSKIAEHLNTEHNNYKCDACKHKFYSKKVIILHMIRRHSVNEQDIHFCYACKTGFLLKTEFERHPCSPNNNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -