Pors032997.1
Basic Information
- Insect
- Platygaster orseoliae
- Gene Symbol
- -
- Assembly
- GCA_030522825.1
- Location
- JAPYZL010114131.1:1-7383[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.001 0.23 13.6 0.1 1 20 98 117 98 119 0.94 2 29 0.44 1e+02 5.3 7.7 1 23 126 149 126 149 0.91 3 29 0.0036 0.82 11.8 2.8 3 23 160 181 158 181 0.95 4 29 0.12 27 7.1 0.4 1 20 274 293 274 294 0.93 5 29 0.43 98 5.3 0.8 1 23 302 325 302 325 0.93 6 29 0.037 8.4 8.7 2.1 2 23 338 360 337 360 0.92 7 29 0.046 10 8.4 1.0 2 23 713 735 712 735 0.95 8 29 4.1 9.5e+02 2.2 0.3 5 23 742 760 741 760 0.93 9 29 5.3 1.2e+03 1.9 1.3 2 23 767 788 767 788 0.96 10 29 0.00015 0.035 16.2 2.1 1 21 1046 1066 1046 1067 0.95 11 29 9.4 2.1e+03 1.1 3.9 2 19 1075 1092 1074 1097 0.90 12 29 1.4 3.2e+02 3.7 8.6 1 23 1107 1130 1107 1130 0.94 13 29 1.9 4.4e+02 3.3 0.2 2 21 1154 1173 1153 1174 0.90 14 29 0.19 43 6.4 1.8 1 23 1181 1204 1181 1204 0.93 15 29 0.00082 0.19 13.9 0.4 1 23 1215 1238 1215 1238 0.96 16 29 1.1 2.6e+02 4.0 0.0 2 19 1272 1289 1271 1291 0.93 17 29 0.0049 1.1 11.4 1.6 1 23 1299 1322 1299 1322 0.94 18 29 0.039 9 8.6 1.4 1 23 1331 1354 1331 1354 0.93 19 29 0.0054 1.2 11.3 1.7 2 23 1467 1488 1466 1488 0.94 20 29 0.047 11 8.3 1.2 1 23 1498 1521 1498 1521 0.93 21 29 0.07 16 7.8 1.3 2 21 1602 1621 1601 1622 0.93 22 29 0.45 1e+02 5.2 4.5 1 23 1631 1653 1631 1653 0.97 23 29 8.5 1.9e+03 1.2 0.7 1 10 1662 1671 1662 1685 0.77 24 29 0.49 1.1e+02 5.1 0.1 1 19 1771 1791 1771 1794 0.94 25 29 0.03 6.8 9.0 2.3 1 23 1798 1821 1798 1821 0.95 26 29 0.097 22 7.3 0.0 2 19 1976 1993 1975 1995 0.95 27 29 0.88 2e+02 4.3 0.6 2 23 2002 2023 2001 2023 0.96 28 29 3.6 8.3e+02 2.4 0.0 3 21 2028 2046 2026 2047 0.94 29 29 0.0088 2 10.6 0.1 3 23 2131 2152 2129 2152 0.96
Sequence Information
- Coding Sequence
- GAACCTACGGGATGTTCCTTGGTAAATTTAACAGAAAAAGAAACCCTGGAATCGGCTGATAAGCCGTCCAACTCATCACTGCAAGATGTTCGCACCCGCGCTTCCAGCATGAGTGATCCTAACGTCGTCGTGCGTCAATATAGAAAGCGAAAATCTCAATCTGAGACTCCGCTGGAAAATTCGTCGGATGAAGATGAGAACGAGGATACCGATAGgacgaaaaaatacaaagataATTCACGTACAGCTTCCAAGAAAAAGCCAGAGAAAGCAGCTGTAAAAAAACCGGTTCACAAATGTTCCATATGTGACGTGGCATTCACTTCCGAGGCATCATTGGAAGCCCACACTGCACGGTACAGAAACACCGGTAAGCATAAGTGTCCTAAGTGTCATATCTGTTTCGTTGACTCCCGAGACTTGCGATGCCACTCCAATTCTGCACATTCGAGAGAAGACCCTAAATGGCCTGTAAACTGCAAAGTATGTTaccaaaaatttgtacatattgaaaatttacaagCCCACATGAAACATTATCATCCGAATATCAAGAAGTCGAACGAGAAATCCACCCCGAAATCGCGAGATAATGAAAACATAAGTTCTCAAGTGCTGAACAATCCTAGCAACTCTTCGCGCAAATGTAACGAGCAAAGACACAAGAAAAAAGATTCTCGGGAATCCCGAACTGATTCGACAGCAGATACATCCACGAAAGTAAATGGAGATATTGGTGATAAACAAAAAGAGGGCACGGAAAAGCCAGCTGAGGCTGAAAAAACAAGGTCAGACAAACAACCTCCGAAAAAAGTTGTCTACAAATGCGACACTTGCGGCTTGAAATTCCATAAGGAGGCGGCATGGAAATACCACATCGTTGAGTATAGTAGCAACGGAAAGTTTGCGTGTTCTAAATgcggaatcatctttttttatgACCGAGATCGACGTCGTCATGAAAAGAATGCTCACAAAACACATGATCCTGAAAAACCTACCAGTTATGTGAGTTGCCAAGTATGCCAGCAAAATTTTAAGTATGACGAAAATTTGCATGCACACATGGTGCATTATCATAATAAAGCTGTAGAATCAAACGAGAAATCCAAGATAACCTTGAAAAATAAGGAGAAGACTTCCACAATGCATCATTCAGACAAAAAAACGAATGAACAAAAGAAAACGTCTCTTTTTCCAACCAGTACGAAACAGAACGTTATGAATCATTCAGACAAAAAAACGAAACAGGACGTTATGGATAAACGAGACGAAAAAACCGACGCAGAAAACAAAATCTCAATTTCTCCAATAACTTCGCCACAAGCGCCAAAACAAACTATCAAAAAAGAGATTCAGACTAAATTGACTGACTATCTGATAAGAACTCCTTCTGCGAAACCATGCCCGAAATCAAGAAAAGCAGAAACGTCTACCAGCGAATTGGGCCCCATTCGGAATTCACTGGCGCAAACTCAAGTTTACTCTCAAACAGTGGAGGTCAGAGAAAAATCCATATCACTCACTAAATCACCCGTCCAGTTTATGGGCCACATAAAGGAAGAAATCGATGCGGATTCTAACGAGCCTTATAAAACACCTCCGGAAACAGATGAAAGTTTGAGACAAAAATACGGATGTcagaaatgttttgtaaaaataccTTATTCAAGTCTGAATATGAAAATGGAAATTGAAGATTCTATGAGTGACGCAGGAGAAGAAATTCAGAACGAGTCCTCGCAAGAAGATAACATCGGCAATGATTCTCTGCAAATTCCCGTGAACAACTGTACCCAAGAAAATACCGTTGACGAAGTTTTCGAAGAAAGAACCATAAAGCAGAATTACGAAGAAAGTATGGAGATTGATTACCAAGAAGACATGGACGTTGACGACGTAGAAGGCATACATGAAGATCCACAAGAAGAATCTTCCAATGCAAATTCCAGTGAACCGTCTAAACAAGATTCCGCAGAAACAGAGCGTGCAGAAAAGAAACGCACGGAAGATAAGCTtcgttccaaaaaatatatagttaAGCTGACGAGATTAGATAACTCTGCACTTCCAACCAGCGTAGAACTTCCGGAAAAACTTGCCGATCCGAGTGTAGCGGGAGAAACTTCTGGCATAACATGCAACATCTGTAAGTTGACGTTTGATAACGAAAACAAATGGGAGCTCCACAAGAAAAAGTACCATTACGCTTACAAATCGACAATCTGTCAGGCTAGATTCACCTGCCAATCGAAACTTATTGCCCATTACTTGGAGCACATACCATCCAACAATCGTCAATGTTGTGTCTGCGGAGAAGCGATGGAGAATGCCCGAGTCTTATACCATCATCTTAAATTACACTGCCTTGAAATCGATCAAACCGTCGATGGACCCATGAACATGGCAATTACGTGTACTTTAAATAGAAAAACTTTTCGATGCGTGTGTGGCCTACAATGCGAAAATGAATTGGAATACAGGGATCACACCCAGAGCTGCACAGAATGGACTAAAGCCCATTACGTTGCTTTTGACTACAAAATGCCTTGCACTTCTGTTATCAGCAAAAATGTACCATCGATCGTTCCCGAAGACTTGAAAAATGCAACGCCTAGCGACGACAGCGAAGATAAAAGCAACGATAACGAATATCTTCATTCTGATGGAAGCGATTCAGAAACCTTGAGCGTCCAATCAGAGTTGGATTTCATAGAAAAAGATTATCCTCTGCGATCGAGAAATTCAGGTCTGGATCTGGGCTCGAAGAAGGCCAAGAACAAAACAGAAAACCGAAGCCTCAGGTCATATTCAGATTTAGAAAAAGAAGATCCCCTGCAATCAAGAACTCCAGAGACTTCGGACAGTACAACGCGATCTGGAAGAACATCGAAAAGCGTAAAACACTTCTCATCTCCCATAGACTCGTTGAAAAAACACGACAAATCAGAAGCAGTGCCAAAACCTTTGAAGAATCAAGAAAACAAAAACCGGAAGAATTCAACCAACGAGACTCCCCCAACATCTTCGGCAACCTTCCAGGTCATTTCATCGCAGCAAGGTAATTTCGTCTTTTTGCCGCAAGAAGAAGCAAGGAAAGAAGACGAAGAATCTGGATCGCCGAAAACTCAAAGTTACCCGTGCCATGTCTGCGGTACGAAATTCCAGAACTACGATAACTTCAAGAAACACCAGCAAAGTTATTCAAAAGAGTTTAACGATGAATGCTTACACTGTCATACCAAGTTCCCGGGGAAAATTTTGCTGAGGTACCACTGTCAAGCGACGCACGATACAGAAAATGTGAGAAACTACGCGTTTCATTGCACAATGTGCAAccaaggatttttcaaaaaatgcaccTTGAGAATGCACATGACCCACATACACCTTGTACAATGGGACGAATCCATGGCGCAGCCATGGATACACCAGAACGTCGATACACCAGATATCCTCAAGTGCGAAGTGTGCAGCATCGAATTTGAAACGGCTGAAGAATGCAAGGCTCATCGTAACTTGTACAACAAAGACCTCCAGCATTACTGTGCAGAATGCAAAATCACGTTTCAAGGTGCATACCTTTTAAAGCAGCATAACAAACTGTTCCATTTGAGTCAAGGAGCCATGATGAAATATAGATACCCATGCAACACTTGCGGCGAAGGTTTTGAGAACGACAATACGCTCAATTCGCACATGCTTCACGTGCATGTAGTTCAAAAAGAACAAGAAAAGGAGCCACCGTTTGATTCATTAATGGAAAATATTAATGTTGCTACGTTTGAGACGGAAAACAACTCCGAAGAACTTACTTGCCAAGTCTgcaatttgatttttgaaaccaTGGAGAGTATGGAGGCGCACGAAGACGAATTTACCAATGATGGAGAATTCCAGTGTGACATGTGCTACAAAAGATGTAGAAACGCTGCTTTGCTAGCTAACCACCGGGAGTTGACACACTTTTCAAAGGAGGAACATCCAAATTACAAGTGTACGACTTGCGGAGAAGTGCTGTCGACGTCTATTTTACTCGACAGTCACAACAAGCATTTCCATAATCGACAtttcaagaacttgaaaaaaaatagctCACGCGCGGAAAAAAATGATCACCAATACAGCCGACTGAGCCGACAAATCCAAGAACCATTGACAACTTTGCGAGTAACGGACAACCATGTGGGTTTAGCACCCGAGACACCAGCTGAAACACTCCCCCAAGAAATAACATCTAGGAAAGAGCTTGCAGTGAAAACTCCCTCATTGGTTACTACTGCATGTGAGAAAACTCCTTCCCCACCGAGACTACTGAAATGCGAAACGTGTCATGTATTGTTCACCGAGGAGGAAATGCAGAATCACTTGGCACAGTTCATGAACGACGGAGATTTGCGGTGCTCTCTATGCTCCAGGCGATTCGTCTCGGAAAATCATCTGCGAGCTCACGAGGTAAAGCATACGATGAAATTCCTGTCTAATCATCCTTTCAAATGCATTTATTGCGACGAAGGCTTTGAACGTCACGGACAGCTGGCAATGCACCAAGCCCACATCCACCGACAGGTGCCGCCGAGGAACCGTCCTCCACCTAGCCTCCCTCCAAAAAGTTCTGAAGAGATAGTGCAAGTCTGCCTCGACGACAAAACCACAATTTACATCAAAGTCGCGCTTGGCCCGAACGTTTATGGTAGTAGCAAATATCCATCATTGCAGGACAATAACTTGCAAACATTGATAGCGACTCTCTTCACTGACTACCACGCCAGGTATCCATTAGCCGGTGTACAGTCTGGATTACAATGCCAGGTCTGCAAGCTCATTTTTCTGGACCACCATAATCTGCAGAAACACATGGATCGGTACATGAAGGAAACTCCCTCATCGCACAGCTGCAGCTTCTGTAGTAAGCGATTCCGCTGGATTGCGTGTTTGGAAGATCACATCCGCAAGCACTTTAATATCAACATCAACAAAGTCTTCACCTGCAGTATTTGCAAGGAGACTTACCTCACGGAAATTTCTCGCTTCGCGCACGTGGCACATTTCCACCCTAAACAGAACACTATTTTGCGTGGCTTGCTGGCGATAGAAGAACAAAAACAGCAAAAACTCAATTCTCGGAGTTCTCTGGTCAAAGAGGTATCCATACTTGAGCGTACCCAGCAAAGCTTTGAGCAAAATTCTGATCAAAATGATATTCAAATCGTGCATGAAAAATCTGGAACGCCAAGTCACTCCAGGGCCCCAGATAtgccaaatttggaaaattctacAGCGTACAACGAACAAACAACGGATAAGGTTTTTATGTGCCCCATAGTCACCTGTCAAAAGTTGTTCTTTTCATCGGAAGATTATCGTCAACACGAAGCAATCTGCAAGAGTTTTCACTGCCAATTATGCAACACATTGTTCAACACTGAAATTTCTCTCAAGAGTCACATGGAATACATGCACAGAAACGTGGCTCCTATACAACCCGCTCCCGCAGTCGTAGAAGCTGCGAGCAAGCAAACGCCAGCCCAGGAAAATAAGGATCAAGCCAGCTCGGAACAGGTCGGTCGTTTGAAAGTCAAGTCCTTTGCCAAGCTTGTAGATAACCAAGAACAAGATCCGCTCAGACTCGCAAGAACATCAGCCCCACTTCAGCGACTGGATCAGTTGGTCAGCAACCCTCATTGGACGCAGATACAAATGAACCCCGATGATGCGGCCTCGCTCCAGACAGCTAGCACCAGTTTGAACCAAACTCATTCCGCAGCACTGTCAACTGCCAAATCAATTGAATCGACTCTGAAAGCACTAGGCGCCACGAAAAAGGTCGTTCTGAACCCTCTGGCAGAATTCATCAAACGCTCGATCACCGTAAACATGGATCGACTCATCGACGGACAGCCGCCCGAGACCCAGATCCCCGTGCAGTGCAAGATCTGCCAAGTCATGTTCTCTGGCATGGACCAGCTCATGCAGCATTTCGCTCTTAAGTGCTGGATCAATCGCTGCTTCATCTGTAACCATATGATGCCGTCAAAGGAAGCTCTGCAGTACCACGTAGCCATGCACAGTGACATCATCTGCCAAGTATGCAGCGCCGTGTTTCTTGACAGGCAGGACTTTCTGCTGCACATGCGTGGATGTGTGGACAATTTTAAGGCAAGCTGCGCGTCTCCTGAACCAGTTGTTGCGAACAACTCCAGTACTGGTAACACTCAGCAAGACGTGCCACCTCCGAGCCTCAGCTGTAACATGTGCAACACTGTACTCTCAGGCTTCCAGGAAATCAATGATCATCTCAAAGTGAACTGCAGGAGTCAAGAAGACATCGCGGGCACCTCCAGAAACACTGACATTATGGACGGACGAGAGCTGCGAAGAGGCGTCAACTGCAGCATTTGCAGGAAAATCTTCCCCAGTGTGTCAGCGATCACGGAGCACCTCAAGACGGAACACAATAATTACAAATGCGGTGCTTGCCAGCACAAGTTTTTCTCCAAGAAGATAATGTTCCTTCACATAATCCGGCGACACAACGTTACCGAGATGGATATTCACTTTTGCTACCTTTGCAAAACAGGCTTTCTACTGAGGACTGAGTTAGAGCGTCATCCCTGTTCCCCAAAAAACAACGTGTAA
- Protein Sequence
- EPTGCSLVNLTEKETLESADKPSNSSLQDVRTRASSMSDPNVVVRQYRKRKSQSETPLENSSDEDENEDTDRTKKYKDNSRTASKKKPEKAAVKKPVHKCSICDVAFTSEASLEAHTARYRNTGKHKCPKCHICFVDSRDLRCHSNSAHSREDPKWPVNCKVCYQKFVHIENLQAHMKHYHPNIKKSNEKSTPKSRDNENISSQVLNNPSNSSRKCNEQRHKKKDSRESRTDSTADTSTKVNGDIGDKQKEGTEKPAEAEKTRSDKQPPKKVVYKCDTCGLKFHKEAAWKYHIVEYSSNGKFACSKCGIIFFYDRDRRRHEKNAHKTHDPEKPTSYVSCQVCQQNFKYDENLHAHMVHYHNKAVESNEKSKITLKNKEKTSTMHHSDKKTNEQKKTSLFPTSTKQNVMNHSDKKTKQDVMDKRDEKTDAENKISISPITSPQAPKQTIKKEIQTKLTDYLIRTPSAKPCPKSRKAETSTSELGPIRNSLAQTQVYSQTVEVREKSISLTKSPVQFMGHIKEEIDADSNEPYKTPPETDESLRQKYGCQKCFVKIPYSSLNMKMEIEDSMSDAGEEIQNESSQEDNIGNDSLQIPVNNCTQENTVDEVFEERTIKQNYEESMEIDYQEDMDVDDVEGIHEDPQEESSNANSSEPSKQDSAETERAEKKRTEDKLRSKKYIVKLTRLDNSALPTSVELPEKLADPSVAGETSGITCNICKLTFDNENKWELHKKKYHYAYKSTICQARFTCQSKLIAHYLEHIPSNNRQCCVCGEAMENARVLYHHLKLHCLEIDQTVDGPMNMAITCTLNRKTFRCVCGLQCENELEYRDHTQSCTEWTKAHYVAFDYKMPCTSVISKNVPSIVPEDLKNATPSDDSEDKSNDNEYLHSDGSDSETLSVQSELDFIEKDYPLRSRNSGLDLGSKKAKNKTENRSLRSYSDLEKEDPLQSRTPETSDSTTRSGRTSKSVKHFSSPIDSLKKHDKSEAVPKPLKNQENKNRKNSTNETPPTSSATFQVISSQQGNFVFLPQEEARKEDEESGSPKTQSYPCHVCGTKFQNYDNFKKHQQSYSKEFNDECLHCHTKFPGKILLRYHCQATHDTENVRNYAFHCTMCNQGFFKKCTLRMHMTHIHLVQWDESMAQPWIHQNVDTPDILKCEVCSIEFETAEECKAHRNLYNKDLQHYCAECKITFQGAYLLKQHNKLFHLSQGAMMKYRYPCNTCGEGFENDNTLNSHMLHVHVVQKEQEKEPPFDSLMENINVATFETENNSEELTCQVCNLIFETMESMEAHEDEFTNDGEFQCDMCYKRCRNAALLANHRELTHFSKEEHPNYKCTTCGEVLSTSILLDSHNKHFHNRHFKNLKKNSSRAEKNDHQYSRLSRQIQEPLTTLRVTDNHVGLAPETPAETLPQEITSRKELAVKTPSLVTTACEKTPSPPRLLKCETCHVLFTEEEMQNHLAQFMNDGDLRCSLCSRRFVSENHLRAHEVKHTMKFLSNHPFKCIYCDEGFERHGQLAMHQAHIHRQVPPRNRPPPSLPPKSSEEIVQVCLDDKTTIYIKVALGPNVYGSSKYPSLQDNNLQTLIATLFTDYHARYPLAGVQSGLQCQVCKLIFLDHHNLQKHMDRYMKETPSSHSCSFCSKRFRWIACLEDHIRKHFNININKVFTCSICKETYLTEISRFAHVAHFHPKQNTILRGLLAIEEQKQQKLNSRSSLVKEVSILERTQQSFEQNSDQNDIQIVHEKSGTPSHSRAPDMPNLENSTAYNEQTTDKVFMCPIVTCQKLFFSSEDYRQHEAICKSFHCQLCNTLFNTEISLKSHMEYMHRNVAPIQPAPAVVEAASKQTPAQENKDQASSEQVGRLKVKSFAKLVDNQEQDPLRLARTSAPLQRLDQLVSNPHWTQIQMNPDDAASLQTASTSLNQTHSAALSTAKSIESTLKALGATKKVVLNPLAEFIKRSITVNMDRLIDGQPPETQIPVQCKICQVMFSGMDQLMQHFALKCWINRCFICNHMMPSKEALQYHVAMHSDIICQVCSAVFLDRQDFLLHMRGCVDNFKASCASPEPVVANNSSTGNTQQDVPPPSLSCNMCNTVLSGFQEINDHLKVNCRSQEDIAGTSRNTDIMDGRELRRGVNCSICRKIFPSVSAITEHLKTEHNNYKCGACQHKFFSKKIMFLHIIRRHNVTEMDIHFCYLCKTGFLLRTELERHPCSPKNNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -