Basic Information

Insect: Platygaster orseoliae
Gene Symbol: L
Assembly: GCA_030522825.1
Location: JAPYZL010037694.1:27740-36075[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3e-05 0.0067 18.4 1.5 1 23 170 192 170 192 0.98

2 16 0.53 1.2e+02 5.0 3.1 1 23 198 220 198 220 0.97

3 16 1.9e-06 0.00042 22.2 3.6 1 23 226 248 226 248 0.99

4 16 3.3e-05 0.0076 18.2 0.2 1 23 254 276 254 276 0.99

5 16 3.8 8.8e+02 2.3 0.4 3 23 340 362 338 362 0.79

6 16 0.47 1.1e+02 5.2 0.8 2 23 388 410 387 411 0.91

7 16 1.6 3.7e+02 3.5 0.1 2 21 441 460 440 463 0.83

8 16 1.6 3.8e+02 3.5 0.0 3 23 538 558 537 558 0.95

9 16 0.0043 0.98 11.6 3.0 1 23 578 601 578 601 0.96

10 16 3.2 7.3e+02 2.6 0.0 8 23 626 642 617 642 0.81

11 16 9.9 2.3e+03 1.0 0.0 6 23 701 719 694 719 0.84

12 16 0.1 24 7.2 0.4 1 23 757 780 757 780 0.94

13 16 0.015 3.5 9.9 0.4 1 23 834 857 834 857 0.93

14 16 1.1 2.5e+02 4.0 0.4 2 23 865 886 864 886 0.95

15 16 0.14 33 6.8 0.3 2 23 1040 1061 1039 1061 0.95

16 16 0.27 62 5.9 0.0 3 23 1071 1092 1069 1092 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3e-05	0.0067	18.4	1.5	1	23	170	192	170	192	0.98
2	16	0.53	1.2e+02	5.0	3.1	1	23	198	220	198	220	0.97
3	16	1.9e-06	0.00042	22.2	3.6	1	23	226	248	226	248	0.99
4	16	3.3e-05	0.0076	18.2	0.2	1	23	254	276	254	276	0.99
5	16	3.8	8.8e+02	2.3	0.4	3	23	340	362	338	362	0.79
6	16	0.47	1.1e+02	5.2	0.8	2	23	388	410	387	411	0.91
7	16	1.6	3.7e+02	3.5	0.1	2	21	441	460	440	463	0.83
8	16	1.6	3.8e+02	3.5	0.0	3	23	538	558	537	558	0.95
9	16	0.0043	0.98	11.6	3.0	1	23	578	601	578	601	0.96
10	16	3.2	7.3e+02	2.6	0.0	8	23	626	642	617	642	0.81
11	16	9.9	2.3e+03	1.0	0.0	6	23	701	719	694	719	0.84
12	16	0.1	24	7.2	0.4	1	23	757	780	757	780	0.94
13	16	0.015	3.5	9.9	0.4	1	23	834	857	834	857	0.93
14	16	1.1	2.5e+02	4.0	0.4	2	23	865	886	864	886	0.95
15	16	0.14	33	6.8	0.3	2	23	1040	1061	1039	1061	0.95
16	16	0.27	62	5.9	0.0	3	23	1071	1092	1069	1092	0.95

Sequence Information

Coding Sequence: ATGCTGTTCAAGGGAAACAGCTCGCGACTGGAGCTGCTCATCGGGAAAATCCAGGCTCACAAAGGCCCGGCTTCGGGCCCTGCTACTTCGAGTGCCAATGCCGCTACTCAAGGTGGTGAATTGCTCGATGGCGGCGATAGCAGTAGTAGCAGCAGTGATGTGCAACAACAAGAGCAACATTCGAGAAGAACAAGACGCAGGAGGCTCAAGATTGTGAAAAATTCTTTGTCAAACAAGGGGGGCGAAGGGGAGGCGGCTGATGAGGAGTATGACAAGGAGGATAAAGAGGGAGAAACGTCGTGCAGCCAAGGGACTTTGGCGAGCTCGTTGCCATGCTCCTCGGAGGTGCCGAATCTCGAGGAGGACCTTGGGCCGGCGACGATGACGACcaagcagcagcagcagcagcagcagcagcaagtTTTGACAACTGCTGCTGCCACCCCCCTCCGCACCCCCGCTGTTGCCACCCCGAAGGTCACCGGAGTTGCTACTGCCGCTGCGCCATATCCCTGTCAATTTTGCGAGCGCACCTTCCCCCGGTTGAGCTACCTCAAGAAACACGAGCAAAGCCACGGAGATGAAATGCCGTACAGATGCGGCTGGTGCGCGAGATTGTTCAAGCACAAGCGCAGCCGGGACAGGCATGTCAAGCTACACACCGGCGACAGGAGATATCGATGCTCGCACTGCGAGGCCGCTTTCTCGAGGAGTGATCACCTAAAAATCCACATAAAGACACACGATACTCAAAAGCCTTACCAGTGCAGTTGGTGCACAAGGGGCTACAACACCGCCGCGGCTTTGACGTCCCACATGCAGTCGCACAAGAAGCCCAAACAGTACGAAATGGACGAAAAAGACGATCGTCGACGGCAGCAGCAAGACGTCAGTGAAAATGGGACAGCGACGACATCCTCGCCTCGGCCTCCACTCACGCCTACGATCAACCTATTACCTCCCCCTCCGCCTCCAATGACAACAACAACAACGATCAACAAGCTTTTGAAACTGGCCTGCATGTACTGCACGAGGGACTCTTTCACGAGCATGCGTCAGCTGCAGTTGCACGTGCGAGGCATGCACGAGACCGCGCGCGGAAATGACGACGTCGAGCAAAAGATCGAGCAGCAACAGCAGCCTCCGAGCGAGCAACTGCTCTCGTGCGCCCAGTGCACCATCAAGCTGCCGAGCCTGAGCTCTCTTCGCGACCACTTGCTCTTCACCCACCACCGCCCGGGCCTCCCTCCCGCCCCGCAAGCAACAGTCCTGCTGAACAAAGAGTCGAATAAAGAGGAGGATGAGCAGCAGCACACGGTGACGTGCCCGTTGTGCGGGCTGGCGTGCGCCTCGGCCACGGTTTACGCGGAGCACTACGTCTTGAAGCATTGCGAGGAGCCGCAAACGTTCGCCGCCTCTTCAACTACTTCTGCTACCTGGCCAGCTGGAGCAGCGGGAGGAACGAAAGGGAAAAGAAGGGGGAGGAAAAGCAGCGACGAAGAAGAGAACGATGACAATACCGAGGAGGATCAAGAGGaagaggaggaggaggaggaggaggataAGAGGTGCGTTAAAGAGGGAAGCGTCTATTCAGCGGGGACGCTGCTGTGCGGCCAATGCGACGCGGTTCTCGAGGATTTCGAGTCTTTTCGGCAACACCTGGCCGGCCATCTTGTTTTGGCGGATCGTCGTCGGTCTTGGTCAAACTCGCTGCCGCAAGCGTCTCGGCACCGCTGCCCCGAGTGCGGGGCCAGCTTCCGCGAGCATGCTTCCATGCTCGCGCACTTGACGAGGTGTCATTACATGATGGCCACTAATATCTCCGACGTACAGCCGCAAGAGCAATACGCGTGCACCGCGTGCCTGCCCGAGCGGCGCTACCCACGGGCCGAGCAGCTCCAAGTTCATCTCCTCGAGGCCCACGCCGAGCGGCTCTTTAGATGTGCCCTGTGTCGCGATACTTTCGACTCGCTCGTTGCTATACAGGTGCACTTCGCTGTCAAGCACTGCAGCAAGAAAACCTGGAACAACGCGAAGAGTAGCCGAGAAGAGTGGTGCCGACCGGTCGCCACTGGCTTCAAATGCATCGGGCCCTCTTGCGGGGCCCTCTTAGCTTCCGAGGCCGAGCTCCGTCGGCACGTCGAGCGCGTTCACTTGCGAGCACCTTCGCCCTCTTGCTGCGCCGATGGCAGGCATCCCTCGTCTCCCCCGCCCCGAACCACCCCTTGCTTGTCCTCGAGTCCTCTGGCCGCCGCTGGTAGCAATTACCGCTGCGCGGTTTGCCACGAGGACTTTCACGTGGAGCTGCTTCTGGAGCGTCACCTCGCGTTGGCGCACAGGCCCGTGCGGCCCAGCAGCAGTGGCAGCGCTGGCGGCAGCAGCAGGAAACGAGCGAGACCGGCAAGCAACAACAATTCGCCGAGCCAGCGCGACCACAATAGGCAGCAGCAGCATCAAGACAACGAAGTGGGGAGCCAAGCCGAGAGCGGAGGCCGGCACAAGTGCAACATTTGCGACGAGCTGACGTCGACGGCGGCGAGCCTCGCGGAGCACAAGCTCCAAAGGCACTGCAAGATCCAGCTGGGCGACACTTGCGTCGTCTGCCGGTGCTCCCTCGGCAACGAGGCCGACTTTTTGCGACACCTCCAGGCccacagcagcagcagcagcagcagcagcagtcaCCTCGAGGCGAGCACGTCGCCCCCGCCGCCACCCCCTCACCTGCCAGCGCCCTGCGTTGTGTGCAGGCAAACCCTCGTGAGTGAGCTCGAGTGTCGAATGCACGCCAAGCACCACCTCCAGCGACCGCAGCTCGTCCTGCAAGGGCTGCTTCTCCCGCCTCCGAATCCCCAGCAGCTCGAGCGACAGCAAAGCGAGCCGAAAACGCAACTTTGCGGCTCGTGCCACGCTCATCGCGGGGAGGCTTACTCGTCGGCTCGTGGCGCAGTGCGGACACGGACAGATATCTCGAGAGCGAGGCGTTGCAGCGAGTGCGGCGTCAAGTTGGAGGACGACACGAAGCAAGAGGACAGCGAGCTTTTGGGTTTCAAAGACGAGGAGGACCACCAATTGGTTCAAGACAGCGCAGTTGTCGCGGCCTCGAAACAGCTGCGCTGTCATCTTTGCCCCCACGACGCTGCCAGCGCTATGCAGCTACAAGCCCACCTCATCGAGCACACCTTCGCCGGCTGCACAGCCCTCGCCTGCTACATCTGCCAGGCCCTCTTCACGGCCCCTCTCGGATTGCAGAATCACATGCTGCGCGAGCATGGCTTGGGAGCGCGGCCTTACGACTGCAGCCATTGCGCCTGCAACTTTTTCTTCAGGACCGAGCTCGATCATCACTTTTTGACTTTTCACCACCttcagcagcagcagcagcagcagcagcagcagcaactaCGGTCGAGCTCGCAAGTAAACGACAACGCCGAGAATAAGCACGTTGACGAGATGAAGCCCGTGATGATCAAGTCCGAGCTGCATCCACGTGGTTACTGCACAGACATGAAACAAGCGGATGCGATCGAGCTGGAGCAAACCACTGGGCAATCTTGTCCAGCCTGA
Protein Sequence: MLFKGNSSRLELLIGKIQAHKGPASGPATSSANAATQGGELLDGGDSSSSSSDVQQQEQHSRRTRRRRLKIVKNSLSNKGGEGEAADEEYDKEDKEGETSCSQGTLASSLPCSSEVPNLEEDLGPATMTTKQQQQQQQQQVLTTAAATPLRTPAVATPKVTGVATAAAPYPCQFCERTFPRLSYLKKHEQSHGDEMPYRCGWCARLFKHKRSRDRHVKLHTGDRRYRCSHCEAAFSRSDHLKIHIKTHDTQKPYQCSWCTRGYNTAAALTSHMQSHKKPKQYEMDEKDDRRRQQQDVSENGTATTSSPRPPLTPTINLLPPPPPPMTTTTTINKLLKLACMYCTRDSFTSMRQLQLHVRGMHETARGNDDVEQKIEQQQQPPSEQLLSCAQCTIKLPSLSSLRDHLLFTHHRPGLPPAPQATVLLNKESNKEEDEQQHTVTCPLCGLACASATVYAEHYVLKHCEEPQTFAASSTTSATWPAGAAGGTKGKRRGRKSSDEEENDDNTEEDQEEEEEEEEEDKRCVKEGSVYSAGTLLCGQCDAVLEDFESFRQHLAGHLVLADRRRSWSNSLPQASRHRCPECGASFREHASMLAHLTRCHYMMATNISDVQPQEQYACTACLPERRYPRAEQLQVHLLEAHAERLFRCALCRDTFDSLVAIQVHFAVKHCSKKTWNNAKSSREEWCRPVATGFKCIGPSCGALLASEAELRRHVERVHLRAPSPSCCADGRHPSSPPPRTTPCLSSSPLAAAGSNYRCAVCHEDFHVELLLERHLALAHRPVRPSSSGSAGGSSRKRARPASNNNSPSQRDHNRQQQHQDNEVGSQAESGGRHKCNICDELTSTAASLAEHKLQRHCKIQLGDTCVVCRCSLGNEADFLRHLQAHSSSSSSSSSHLEASTSPPPPPPHLPAPCVVCRQTLVSELECRMHAKHHLQRPQLVLQGLLLPPPNPQQLERQQSEPKTQLCGSCHAHRGEAYSSARGAVRTRTDISRARRCSECGVKLEDDTKQEDSELLGFKDEEDHQLVQDSAVVAASKQLRCHLCPHDAASAMQLQAHLIEHTFAGCTALACYICQALFTAPLGLQNHMLREHGLGARPYDCSHCACNFFFRTELDHHFLTFHHLQQQQQQQQQQQLRSSSQVNDNAENKHVDEMKPVMIKSELHPRGYCTDMKQADAIELEQTTGQSCPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -