Basic Information

Insect: Platygaster orseoliae
Gene Symbol: SPAC25B8.19c
Assembly: GCA_030522825.1
Location: JAPYZL010178688.1:5526-9994[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0006 0.14 14.3 0.6 2 23 72 94 71 94 0.96

2 15 0.0044 1 11.6 1.1 1 23 108 131 108 131 0.96

3 15 0.00057 0.13 14.4 2.6 1 23 138 161 138 161 0.97

4 15 5.6 1.3e+03 1.8 0.5 2 12 167 177 167 179 0.85

5 15 0.00013 0.031 16.3 0.9 1 23 194 216 194 216 0.98

6 15 2.1e-05 0.0048 18.9 0.2 1 23 220 242 220 242 0.98

7 15 8.6e-06 0.002 20.1 0.7 2 23 247 268 246 268 0.97

8 15 7.8e-07 0.00018 23.4 1.2 1 23 274 296 274 296 0.99

9 15 3.4e-05 0.0077 18.2 1.8 1 23 325 348 325 348 0.91

10 15 2.2e-05 0.005 18.8 1.9 1 23 354 378 354 378 0.97

11 15 0.024 5.5 9.2 5.0 1 19 384 402 384 407 0.90

12 15 9.6e-05 0.022 16.8 0.3 1 23 413 435 413 435 0.96

13 15 0.00021 0.048 15.7 0.3 2 23 441 463 440 463 0.96

14 15 1.3e-05 0.0029 19.6 0.7 1 23 469 491 469 491 0.97

15 15 0.00017 0.039 16.0 2.5 1 23 495 517 495 517 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0006	0.14	14.3	0.6	2	23	72	94	71	94	0.96
2	15	0.0044	1	11.6	1.1	1	23	108	131	108	131	0.96
3	15	0.00057	0.13	14.4	2.6	1	23	138	161	138	161	0.97
4	15	5.6	1.3e+03	1.8	0.5	2	12	167	177	167	179	0.85
5	15	0.00013	0.031	16.3	0.9	1	23	194	216	194	216	0.98
6	15	2.1e-05	0.0048	18.9	0.2	1	23	220	242	220	242	0.98
7	15	8.6e-06	0.002	20.1	0.7	2	23	247	268	246	268	0.97
8	15	7.8e-07	0.00018	23.4	1.2	1	23	274	296	274	296	0.99
9	15	3.4e-05	0.0077	18.2	1.8	1	23	325	348	325	348	0.91
10	15	2.2e-05	0.005	18.8	1.9	1	23	354	378	354	378	0.97
11	15	0.024	5.5	9.2	5.0	1	19	384	402	384	407	0.90
12	15	9.6e-05	0.022	16.8	0.3	1	23	413	435	413	435	0.96
13	15	0.00021	0.048	15.7	0.3	2	23	441	463	440	463	0.96
14	15	1.3e-05	0.0029	19.6	0.7	1	23	469	491	469	491	0.97
15	15	0.00017	0.039	16.0	2.5	1	23	495	517	495	517	0.98

Sequence Information

Coding Sequence: ATGTGCCTCCAGGTTCCCATCTATCTCTCCACCCATCCTGGCAGCCGTCATCGGCTCCAGTGGGCTCCAGCCTCCTTTCCAAACCACACTCACTCCTGGcagccgtcaccggctccaggtcACCCTACCCCGTGTCGGCGCGGTTCGGCGGAGCAGCACCTGCAAGTGATGGAGATCGAAATGGAAACGGAGTACGTCCATTGGGACCCGAAAGTATGCCCATTCTGCGACAAGCAGTTGAAAAGCGAAAAGCAAGTTAGACGACACATCAACAGCGTGCACTCGCAACCCCATAAGGCCCACGACAAGGCCCAGGTTTACTTCGAGTGCGAGGCCTGCCACCTCAAGTACAAACGCGAGGAAGGCTTGAAACAGCATTACGCTCGCGTCCACAGCTCGATCGAAGCCAAGTTCGTGTGTTTTCACTGCGACAAAAGGTACAAGCTCAAGATGGACCTTATCCTGCACATCAGCAGGACCCACATGTGCGACACTCGGGTCTGCAGGTTCTGCGGCAAGTCCGTCAAGGACATCAAAGGTCACGAGTGGCGCCACCAGGTCCAAGAACGAAGTAAGGACTACCCGTGCGGTCTGTGCTATAAAAAGTTTCGCTCCCAGACGAGCCTTGATAATCACGTCCTCAGGCATAGGGAAATGTACACTTGTGGAGAGTGCGGATTGGAGTTCTCGGGGCCGACTCAGTTGCGGAATCATAAGTTGAGGCACAAGCCTGGGACACCGTGTACTATTTGCGGGAAAGAGTTTTTTTCCAGGAGCAACTTTTATCAGCACGTTCTGACGCACCAGAATGTAAGGCCGTACAAGTGCGACGTGTGCAACGAGGATTTCACGCAGAGGTCGAGTCTGCTGCGGCATAGGAAGATACATCCTGGGCCTTTGCCACCGTTGACGGCTCCGACTGCGATTGCTGAGTTGGCGAAGAATATTCTTAGCAAGGCTAAAAAGGGCGAATTCAGCTGCGAGTTGTGTAGGAAAAGCTTCAAGCAACGCGCTAAATTGACTCGCCACGTGACGGGAAAACACGGCACTCAGCGGCCGTTTCCTTGCGACTTTTACGGTTGCGGTAAGGCCTTCAAATACAAATGCGACCTGAAATCGCACCAACTTGTCCACGAAACGGAGACATTTTACACTTGCGATCAATGCGAGTATCGCACCAAGAGTAAAAATAACCTCAAAACCCATTGCATACGAAAACACACGAGCCACCACAAATTCGAGTGCTCGGTGTGTTCCAAGAAATTCAAGCTCAAGTGGGACCTCAAAGTCCACGCCGCGATTCATCTCGAAAAGTGCCTCGTATGCGAAATTTGCGGTCGTTTGTACACTAGCCAATTGTCGCTCTCCAAACACCGCAAAATGGCGCACGTCAACCAGTACAAATTTCGCTGCGAGTTGTGCGGAAAACGCTTGATGACGAGGGAAAATCTGCAAAGCCACATGTCCCTCCACCAGCAGACCCACGAGTGCAACGAATGTGGAAAAGTCTTCCTCGTCAAGCGCTACCTGCAAATGCATCGCAAGACGCACTTCTAG
Protein Sequence: MCLQVPIYLSTHPGSRHRLQWAPASFPNHTHSWQPSPAPGHPTPCRRGSAEQHLQVMEIEMETEYVHWDPKVCPFCDKQLKSEKQVRRHINSVHSQPHKAHDKAQVYFECEACHLKYKREEGLKQHYARVHSSIEAKFVCFHCDKRYKLKMDLILHISRTHMCDTRVCRFCGKSVKDIKGHEWRHQVQERSKDYPCGLCYKKFRSQTSLDNHVLRHREMYTCGECGLEFSGPTQLRNHKLRHKPGTPCTICGKEFFSRSNFYQHVLTHQNVRPYKCDVCNEDFTQRSSLLRHRKIHPGPLPPLTAPTAIAELAKNILSKAKKGEFSCELCRKSFKQRAKLTRHVTGKHGTQRPFPCDFYGCGKAFKYKCDLKSHQLVHETETFYTCDQCEYRTKSKNNLKTHCIRKHTSHHKFECSVCSKKFKLKWDLKVHAAIHLEKCLVCEICGRLYTSQLSLSKHRKMAHVNQYKFRCELCGKRLMTRENLQSHMSLHQQTHECNECGKVFLVKRYLQMHRKTHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -