Basic Information

Gene Symbol
Cdc5l
Assembly
GCA_030522825.1
Location
JAPYZL010029122.1:1-6121[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-13 1.6e-09 39.3 0.1 1 46 7 51 7 51 0.95

Sequence Information

Coding Sequence
TTGGATCCCTCCACCAAGAAAACCGAATGGAGCCGCGAAGAAGACGAGAAGCTGCTTCATCTGGCGAAACTGATGCCGACCCAATGGCGCACTATCGCCCCCATTGTCGGTCGCACCGCCGCCCAGTGCCTGGAACGCTACCAGTACCTTCTGGACCAGGCCCAGAAAAAGGAAGAAGGCGAAGACCCATCCGACGTGCCTCGCAAACTAAAACCAGGCGATATCGACCCGAACCCGGAGACGAAACCAGCACGACCCGACCCCAAGGACATGGACGAGGACGAACTGGAAATGCTGTCGGAAGCGCGAGCGCGTTTGGCCAACACCCAGGGCAAGAAAGCCAAGAGGAAGGTTCGCAAGAAGCAATTGGAAGAGGCTCGTCGCTTGGCGGCTCTTCAGAAAAGACGGGAACTGAGAGCGGCCGGGATCTACGTCTCGCAGAAGAGCAAACAAAAGCGAGGAGTCGATTACAACGCGGAGATCCCCTTCGAGAAGAAGCCGGCTCAGGGATTCTACGACACTTCCAAGGAATGGCGGTGCTCTTCGCAAGGAGAAGGAAGAGGCCGAGAGGAGGCCGAGAGGAGGAAGGACAAGCAGAAGCTGCAGCAGAGGAAGGAAAACGACGTTCCCAAGAGCATGCTGAACAACGAGGAACCGGCGAGGAAGAGGAGCAAGCTGGTACTGCCGAGTCCCCAGATTTCGGACCAGGAACTCGAGCAGGTGGTGAAACTTGGAAGAGCTTCGGAAGTGGCGCGAGAGGTGGCGTCCGAGAGCGGAGTGACCTTGTCGGATGGGCTATTGGCGGATTATTCTTTGACCTCGAGCACCGTGGCAACGCCAAGGACACCTGCTTTAGTGAATAGGGTGCTCCAGGAGGCGCAGAATGTTATGGCGCTGACGCATGTTGACACGCCGTTGAAAGGGGGCTTGAACACTCCGTTGCATAATGCGGATTTTTCGAGTGTTTTGCCGGCTTCCAGCGCGGTCGCGACTCCGAATACGGTTTTGGCGACTCCGTTCAAGGGGCAGAAAGGCGATGGCACTCCGGCTATTAATTTCAGCACGCCATCGTCTATTAGGTCGCAAGGGAGCGTCGCGTTGACTCCAATCAGAGACAAGTTGAATATAAATCCCAGCGAAATGGACGGCTCGGAGACTCCGATGATGCAGAGGGTCGCGAGGGAAAAACTTCGCGAGGGCTTGGGATCGCTTCCCGCGCCGGAGGAGCTTAAAGAATTAGAAATGAAGGAACTTTCGAGGAGGTCCCAGGTGATTCAAAAAGGGCTTCCAAGACCGGGGGAAGTGAACATTAACACTTTGAGACCTCGCATGGACTCGTCATTGACGGATCTGCAGAGAGCCGAGGAAGAGATAAAGAAAGaaataagTGACAACGACAATTTTCTCGACCCTACATTGACTGGAAAAAAAGCGATCGCCGCTGCTTCTCAGGTTGAGGGGTTTTTGAAGGAGCATCCTTACGTTCACTACGAGCCCAGTGAAATTGAATCTGCcaaagaacttttgaaaaaagaaatggagGTCGTGAAAGAAGGCATGGGACACGGAGATTTGAGCCTCGAAGCGTATTCGACTGTTTGGGAAGAGTGCCTGTCCCAAATATTGTATTTGGAGCCCCAAAAACGCTACACTCGAGCAACTTTGGCCTCGAAAAAGGACAGAATCGAGGCTTGCGAGCGCAAGTTGAAAGAAAACCGAACACACATGACTGGAGAAGCGAAAAGAGCCGCCAAAATggagaaaaaactgaaaattctcaCTGGAGGTTACatgTCAAGAGCTCAAGTTCTGACAAAACAGTTCCAAGACTTGACAGACCAAATTCAACAAGACCAACTCAATCTGTCGACGTTCGAATTCCTTCAAGAATTGGAAAAAGCTGCGTTGCCACGAAGAATAAACGCTCTCCAAGAAGACGTGAATCGGCAAATGGAAAGGGAAAGCGCTCTTCAATTGTGA
Protein Sequence
LDPSTKKTEWSREEDEKLLHLAKLMPTQWRTIAPIVGRTAAQCLERYQYLLDQAQKKEEGEDPSDVPRKLKPGDIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKVRKKQLEEARRLAALQKRRELRAAGIYVSQKSKQKRGVDYNAEIPFEKKPAQGFYDTSKEWRCSSQGEGRGREEAERRKDKQKLQQRKENDVPKSMLNNEEPARKRSKLVLPSPQISDQELEQVVKLGRASEVAREVASESGVTLSDGLLADYSLTSSTVATPRTPALVNRVLQEAQNVMALTHVDTPLKGGLNTPLHNADFSSVLPASSAVATPNTVLATPFKGQKGDGTPAINFSTPSSIRSQGSVALTPIRDKLNINPSEMDGSETPMMQRVAREKLREGLGSLPAPEELKELEMKELSRRSQVIQKGLPRPGEVNINTLRPRMDSSLTDLQRAEEEIKKEISDNDNFLDPTLTGKKAIAAASQVEGFLKEHPYVHYEPSEIESAKELLKKEMEVVKEGMGHGDLSLEAYSTVWEECLSQILYLEPQKRYTRATLASKKDRIEACERKLKENRTHMTGEAKRAAKMEKKLKILTGGYMSRAQVLTKQFQDLTDQIQQDQLNLSTFEFLQELEKAALPRRINALQEDVNRQMERESALQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01213975; iTF_01213252;
90% Identity
-
80% Identity
-