Pors007604.1
Basic Information
- Insect
- Platygaster orseoliae
- Gene Symbol
- -
- Assembly
- GCA_030522825.1
- Location
- JAPYZL010025868.1:104-511[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-11 6.6e-08 33.8 0.0 2 42 11 51 10 54 0.92 2 2 9.1 2.9e+04 -3.5 0.0 17 22 127 132 124 132 0.79
Sequence Information
- Coding Sequence
- ATGAGTAAAAGAATAATTCACAATTATAGCGATGAAGACTTGCAAAAAGCTTTACTCTCTATTAGAGAAGAAGGAAAAAGTCTACGCAGTGCCAGCCGTGCTTTTGGAATTCCTAGAACAACTTTGAGCGACATTATTAATGGTCGTGTACCAGAAAAAAGTCGGCGAATGGGGCCACAACCAATTTTGTCATTAACTATCGAAGAAAAACTTGTTGAATGGATTCATTGCCTAAGCAAATGTGGTTTCCCTGTTAAAAGGTATTACCTACTTAACACCGTACAAAAGATTGTGAAGCAAGGTCAGTTCCAAACTCCTTTTGAAAATGAAAGGCCAGGTAAAACCTGGgtgaaattatttctaaaaaggCATCAAGAATTAAGCCAGCGAGAAGCTGAGAGCATATAA
- Protein Sequence
- MSKRIIHNYSDEDLQKALLSIREEGKSLRSASRAFGIPRTTLSDIINGRVPEKSRRMGPQPILSLTIEEKLVEWIHCLSKCGFPVKRYYLLNTVQKIVKQGQFQTPFENERPGKTWVKLFLKRHQELSQREAESI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -