Pors009031.1
Basic Information
- Insect
- Platygaster orseoliae
- Gene Symbol
- -
- Assembly
- GCA_030522825.1
- Location
- JAPYZL010030627.1:2014-9431[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-16 6.8e-13 49.7 0.0 2 42 115 156 114 159 0.94 2 2 3.7 1.2e+04 -2.3 0.0 25 33 258 266 257 266 0.83
Sequence Information
- Coding Sequence
- TTGCAATGGACAATAATGGAGCACACATACCCGCGTTTCGCCCTGACCTCGTGTCATACGAATTTGTCAATCCAATCTCCGCCGGGTCTGACGTCCCCGGAAATCGGGGTGACAAACCTTGCCGAGCAGTATGGGGCCTCGGTGAACGCCGCGAATTGCGCCCTATCGAATTACCCGGGCTCGCCCCACGCCACCATGCAACAGGCCCTTTCCTTGGGAGTGTCCTCGGTGAACCAacaacagcagcaacagcaacagcaGTGCCAGAGCAGCTGCACGAGCCCTTGCACCAGCCCCCAACAAGTCACCATCAAACGTAAACGTTCGACGAATCCCCAGGCCGACGAAAACTTCATCCGCGCCCTGGACGCCGTGCGGTACGGTGGAATCGGATTTTGCAAAGCCGCCAGGATGTTTGGTGTCAACAATCGCACACTTTGGCTAGAGTACAAGAAACGCGGCTACCCGAATAACAGGCCCAGCCTCAAGTCCAGGGTCAAGGTCGAGACCTTGAACCCGTCAACGTCTCCACCTCCGGCTAGCCTCAACAGCAACTCCAACAGCGGGGCATCGGCGTCGACGGCGACGGTCGTGGACCCCCAGAGTCCCACTGGGCCCATGGGCCCGCCCTCAGTGACGCCCCAAAATGCACATACTGGACATACTACCCATAACATGCTCTCGGCTCATGCGTCCCATGGGATGTTGAGTGGTTATCTAGACACGCGGCATAGCGACTATAGCTTACAGAGCCCGTCCATGCCTATTAACTTGCATGGGGTGAATTACAGTGCTCTTTGA
- Protein Sequence
- LQWTIMEHTYPRFALTSCHTNLSIQSPPGLTSPEIGVTNLAEQYGASVNAANCALSNYPGSPHATMQQALSLGVSSVNQQQQQQQQQCQSSCTSPCTSPQQVTIKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKVETLNPSTSPPPASLNSNSNSGASASTATVVDPQSPTGPMGPPSVTPQNAHTGHTTHNMLSAHASHGMLSGYLDTRHSDYSLQSPSMPINLHGVNYSAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01213240;
- 90% Identity
- -
- 80% Identity
- -