Pequ001360.1
Basic Information
- Insect
- Platygaster equestris
- Gene Symbol
- pnr
- Assembly
- GCA_030522785.1
- Location
- JAPYZK010000193.1:34593-49152[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8 1.5e+04 -3.3 0.0 21 28 10 17 7 18 0.72 2 3 0.94 5.1e+03 -1.8 0.2 3 13 197 212 196 219 0.67 3 3 6.7e-16 3.6e-12 46.7 5.2 1 35 387 420 387 421 0.98
Sequence Information
- Coding Sequence
- GTAAAGGATGACGACTTGATGCCGCCGATCATTTGTCAACGCTGCGTGATCAAATTAGACGTACTCCACAATTTTCGCGAGGTATCGCGCAAATCCGACACTTTACTCAAACAGTACCTGGATTATGCCAAGCAATTATCGCCACAAGACTCACAgGAAAAGTCTTACGCCACTGCCAAAGTAGCGGATTTTAGTCCCCTGGAAACGTTTTTACAATTAAACAGAACGTTGTTCAACGAGAATCCCAACTCGCCAGTCAGCATTAATCAAAACGTGATACCTCAGACGCAAACGCACCGCGTGGAAATGCGTCCCAACGAGATCGACCTTTTGCGGGAGGATTACGGGGTGGTCCGGAAATCCGAGCccgaggaggaggaggaggacgACGCCTCCTCCAACAGCTCGGACCCGGAGCGCCTGGAGATCGAGGATCGCGACGACGAGGCCGAAAATTGCAGCGACGATGCCGAGGAAAACGTCCACGACATGACCCTGAAACGCTTCCAAGCCGACGACTACAGCGCCGGCTCCAAGCACAGCACCCCCAATCCGAGCCCCATCAATCGCATGGACACCCCCGAGAGCAATTGCTCCGACACCCACATCGACCAGGAAACTACCAAACTTTGGCAGGCACTTGCCAAcaataggaatttggaaatcacgCGAACAAACggtgaaaacttgaataacGGTTACACTGGCGAGGCAACAAATTTGTTAAGATCGTTAATAAACAATCGGCAAATCGGTATTTCAACGATCGACACGGAACGAACGTCACCCCCTCAACAAAACGTCCGGTATTACCGGGACACCCAGGGCCCGACCATGGAACGCGCCGTCCCTGACTGCCCCCTTCCCCCCAACAGGAACAACGTTTCCTGCATGGAAAACAAgAGTGCCTCTTTAGATAGCAACCCTTCCAGTCCTGCCAGCATCGGTCGCAAGGAAACGAAGAGCAACAAACGGAAACAAAGCTTCCCAAGCAAGGCCCCCACGAGTCCCAAAATCGCCAACTACTCCCAGGAATCCAACGAGGAACAGGCCCAAGACTTCACGGCCTGGTCAAACAAGATTAAGGGGAAGATGGACGAACAGAAACACCAGCTCGATCAGCACGGTGGGAATCTGGCGAAAAAAGTGGACATGTCGTGTACCAATTGCGGGACGATGACCACGACGATTTGGAGGCGAAATTTGAAGGGTGAAATGGTTTGCAACGCTTGCGGGTTATATTACAAGCTACACGGGGTGAATCGTCCGGTCACCATGAGGAGGGACACCATACACACGAGGAGACGCCGGCCCAAAGGCGAGAAACCCACGAGGCATCGAAAAAAAGAAGAGACGATCTTGCCGGCGGCAAACTCGGAGCAGATGGACTCGGAAAGTCAGGACATGCTGGCGGCTTTGAGGCGGCAAATACAGCCGCACTTGATGATGGCCGCGCTGACGCCCCCGCGTTTGCCCGGGATACACCACAACCCTCCGCCGACGTCGCAGTTGAATTATCCACTTCCCTTGTCGACGTTCTTGATGCACaacccCCAAATTTCGCCACGACTCCCTCTGCcccaaatgaaaaatgaaagcaGGGAGCACGTGTACCCCATGGAAGACTGTAACGAAGGCGACGACGAGGACGAGGAACACGAATCCGACGTGCCCTTAAACCTCGTGTCCACGTCCCTGGCGGAGGAAAAccattga
- Protein Sequence
- VKDDDLMPPIICQRCVIKLDVLHNFREVSRKSDTLLKQYLDYAKQLSPQDSQEKSYATAKVADFSPLETFLQLNRTLFNENPNSPVSINQNVIPQTQTHRVEMRPNEIDLLREDYGVVRKSEPEEEEEDDASSNSSDPERLEIEDRDDEAENCSDDAEENVHDMTLKRFQADDYSAGSKHSTPNPSPINRMDTPESNCSDTHIDQETTKLWQALANNRNLEITRTNGENLNNGYTGEATNLLRSLINNRQIGISTIDTERTSPPQQNVRYYRDTQGPTMERAVPDCPLPPNRNNVSCMENKSASLDSNPSSPASIGRKETKSNKRKQSFPSKAPTSPKIANYSQESNEEQAQDFTAWSNKIKGKMDEQKHQLDQHGGNLAKKVDMSCTNCGTMTTTIWRRNLKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKEETILPAANSEQMDSESQDMLAALRRQIQPHLMMAALTPPRLPGIHHNPPPTSQLNYPLPLSTFLMHNPQISPRLPLPQMKNESREHVYPMEDCNEGDDEDEEHESDVPLNLVSTSLAEENH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -