Pequ007654.1
Basic Information
- Insect
- Platygaster equestris
- Gene Symbol
- -
- Assembly
- GCA_030522785.1
- Location
- JAPYZK010002192.1:1-8948[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.086 13 7.5 0.1 1 20 121 140 121 142 0.95 2 24 0.034 5 8.8 5.7 2 23 182 204 181 204 0.94 3 24 0.0051 0.76 11.4 1.5 1 23 442 465 442 465 0.97 4 24 0.23 35 6.2 2.0 1 23 496 518 496 518 0.98 5 24 0.037 5.5 8.7 2.3 1 21 747 767 747 768 0.94 6 24 0.00047 0.07 14.6 0.5 2 23 776 798 775 798 0.94 7 24 0.22 33 6.2 5.5 1 23 808 831 808 831 0.94 8 24 0.089 13 7.5 0.4 2 21 856 875 855 876 0.94 9 24 2.6 3.9e+02 2.9 2.6 2 23 884 906 882 906 0.89 10 24 0.00049 0.072 14.6 0.3 1 23 917 940 917 940 0.96 11 24 1.3 2e+02 3.8 0.1 2 19 973 990 973 992 0.94 12 24 0.017 2.5 9.7 4.9 1 23 1000 1023 1000 1023 0.97 13 24 9.7 1.4e+03 1.1 4.3 1 23 1032 1055 1032 1055 0.90 14 24 6.3 9.3e+02 1.7 0.0 2 20 1184 1201 1183 1203 0.88 15 24 0.23 34 6.2 6.8 2 23 1211 1232 1210 1232 0.96 16 24 0.0014 0.2 13.2 1.2 1 23 1242 1265 1242 1265 0.94 17 24 0.0012 0.17 13.4 0.1 1 21 1343 1363 1343 1364 0.94 18 24 0.035 5.3 8.7 0.8 3 23 1375 1395 1373 1395 0.97 19 24 4.2 6.2e+02 2.2 1.4 1 23 1404 1427 1404 1427 0.89 20 24 0.086 13 7.5 0.0 3 20 1501 1520 1500 1522 0.91 21 24 0.03 4.5 9.0 0.5 1 21 1526 1546 1526 1549 0.84 22 24 4.1 6.1e+02 2.2 0.0 3 20 1740 1757 1739 1757 0.93 23 24 0.039 5.7 8.6 0.0 3 23 1793 1814 1791 1814 0.95 24 24 3.5 5.1e+02 2.5 5.2 1 23 1817 1839 1817 1840 0.94
Sequence Information
- Coding Sequence
- AACCGGCAACAGCTGCAAAGGCCAATAATGGGTGCCATTTTATCAGCAGCGAGCATCGGGGCAGCATTTGCAGAAGCATTTGCAGCGCACGCGGTCGTGGCAGCTCACGCTTTCCTAGCGCACGAAACGTACATCCTTCATAGCGCACAAATGAAGTGTCCCAGCACTACGAGCAATTCCGGCATCTCTGTTCACACAAGAAACAAGCGAAAATATGAAGAAACGTTCCTAGACACTTCTCAGTTAAACGATGATCATTCAGCGGCCGAAGGTGACGTCGAAGACAGGTCTAAAAAAAGCAAGAAAAAGCCAGCCGTGGCTCGCCgtgaaaaacccaaaatagtAAGCAGgaataaagttttcaaatgcgACACGTGCGGGCTGCAATACGAAAGCGAGTTAAAACTGACAGCCCATCTTATTCAGTACAGCAACACGGGAAATTTTGCGTGTTCCAATTGTAAACTCCGTTTCGTCCATTCACGAGACTGCCACCATCATATGAAATTCGGTCATTCGAGAAATGTTGGCAACAAGCATCAAGTTTGTCCTCACTGTCAGCAGACTTTCAAGTATGAGGAGAAGTTTCACGCTCACATGACACACTATCATCAATCAGTTCAAACGAGCAATAAGTCGATCgcacaaaaaaaagtttccatcTCTCCGAAAACCGGCTCCCCACAAGACCCAAAATATACTGCCAGGAAGGGAATCCAGACAAAACTGACCGATTACCTAATAAGAGCTTCCCGTGTGAAACCATGCCCGAAATCGAAGAAGCCAGGAGCGTGCAACATTCAAGTTGGTCAAGTTATGAGCTTGTCTTCGTCGCTCCCATTGGGTCACATAAAGGAAGAAATCGACGGCGATTCCAACAAGCCTTTCGAACCACCCAaagaatcggaaaaaatccTCGCACGTAGATATGGATGTCGGCCATGTTTCGTGGACGTCACTCGTTTGGATGTCGTGATAAAATCGGAACTCGAATGGCCTCTTGGTCACGCGGACGAAAATGAATTTGTGAACGAGGAGTTGAGAGGGGACATCGCAGGCGACTATTCGGAGGAAAGCATAAGGGAAGAGGGTTATCAGGACATGGGTGGAGAAGATCAAGAAGACAGCACGAATGCGAGTGACCGAGGAGAATCTTTCTGTGAGTCCACTAACGACGACACCGAGCAGAATGTACGAAAAAAACAGCTTGAGGAGAATATTCGACGCAGAGAATACAAGGTTTTGTTGACCAGATTGGAGGACACCGTTTTGCCACCGGGAATCAAAATCGCAGAAAGACTGGCCGACCCAGTTGAACCGGACTTCGTATGTGGCATCTGCAAGAGAAGGTTCACGGACGAGAACAAATGGGTCAATCACAAAAAGAAGTACCATTTTGTGTACAAATCAACGATCTGTCGGGCAAGATTCAACTGCCAAACGAAACTGATAAACCACTACTTCGAGCACATACCAccgcagaattttcaatgctgTGTCTGCGGAGAAGCGATTCGGAACGCGAAGATCTTGTACCATCATCTTAAAATGCACTGTGTGGAAATCGATCAGACCGTCGAAGGACCTATGGACATGAGTATTACATGCACATTGAACAGAAGAACCAATCGATGCGTCTGTGGTGTGGAATGCGGCAATGAATTCGAGTACAGAAATCATACAGGCAATTGCGAAGCGTGGACGAAAGCCCATTACATTGCTTTCGACTACAAAATGCCTCCCGTTAAAGAACTACGAGAGAATACGTACTTTGTTGACCCCAAGGAATCGAAAAATCTACTTCCCAGCGACGAAAGCGATGATCCAAGCGTGGACAGCGAGAGCTCTGATGACAGCGATTCCGATATCATGAGTGTCGCTTCGGACGACGTGGGAAAGGAGTACCCCTTACGCTCGAAAGGTCTACCAGTGGATCACATCGCGGATTCCGTGACCCGAGAACACGCGGACAACACGACGAGATCCGGGAGAACACTGAAAAGTGTAAAACACTTTACCTTCCCCATGGACGCCTTGGGTAAAAGCGACCAATCAGGAGTAGCCAAAGTTGTGAACGATCAAGAGGAGCAACCGAAAACTAGAATCAATGACAGTCCACCTCCATCTTCGACGATGAATTTCAAGGTCATTTCGTCCCAAGAGGGCAATTTCGTCTATCTACCCGAAGATGAGGGAGTAGAAGTAAGCGGTGAAACTGCTTCTCCGAAAACTCAGAGCCATCCGTGTTTGACGTGCGGGACGAAGTTTCACAACTACGAAAACTATTACAAACACATTCAAAGCTATTCGAAAGGCTTCACGAGCAAGTGCTCTTACTGCGGGACAAGGTTCCCTGGAAAATCTCTGTTGCGGTACCACGTTCAAGCGACGCACGCCACGGAGAATGTCAAGGATTACGGGTTTCGTTGCCCCTCGTGCAATCAAGGTTTCTTCAAGAAATGCACTCTCAAAATGCACATCACCCATATTCACAAAATAAAATGGAATGAGTCATTCGCGCCATCGGAAAAACCAGCGAAAATTGACATAACATCAGGGGGCTGCAAGTGCGAGGTCTGCAGTATCGAATTCGACACGAGCGAAGATTGGGCTTCTCACCAGAAATTCTACAACAAGCAACTTAAGTGCAACTGCTCTATCTGTAAAATCCAGTTCAACGGGGAATACGTCTTGAAACAACACAATAAACTGTTCCACTTGAGCCAGGGGGCCATGATGAAGTACAGATACCCGTGCAACACTTGCGGCGAAGGCTTCGAAAACGACAATTCCCTTAACTCTCATATGCTCCACGTCCACGTAGCTCGCAAGAAGACACCAACGCCGCAACCACTGGATTTGACCGTGGAAGAACTCGACGTCCCTAAGAACTCTTCCAAGACCTTCGACGATCGCACTTGCCGGACCTGCAACATGATTTTCGAGACTATTGACCACATGTGGGCGCACGAGGAGGAGTTTACCAACGACGGTGATTTCCAGTGTAACATGTGCTATAAGAGATGCAGGAAAGAGACGCTGCTGGAGACCCACCAAAAGTTGACCCATTTGAACCCGGATAAGAACCCGAAATACAAATGCTCCACTTGCGGGGAGGTCATGCACAACTACCTTTCGCTGAACAGTCACAACAAGCATTTCCACAATCGTCTTCCCTTGGGTAGTAGGGTTACCGTGGTTCCAGAACGTGCGGATCATCAGTACAGTCGACGACCTTGGAAAACCATGGCACATCTTGAACCACCAGCTCCAAGCACTCAAAAACCGGTTCGAGAAGCGTCGGTTCGGAAAGAGGTTCGAGAAGTGCCGCCTCTGAAACCAGTTCAGAAACTGCCGGTTCGAAAACCTGTTCAGGAAGTGCCCGTTCGAAAACCAGCTCAGGAAGTACCGGTTTGGAAACCAGTCCAAGaagttcaagttgaaaaagacGTTAAAGAAGTACCAGTCCTACAATCTCTTCAAGCGTTCGATACCGAACGTCTAGCTTCAGCTTACAGCGCGTTCCAAGACCGTCAGCAGAAATCATTGAAGTGCAGCATATGTAGCGGGGTGTTCAACGAGGAGACGATGAAAGATCACATCGCGGAATATTTGAACGATGGAGACCAACGTTGCTCCAGATGCTCGAGGCGATACTCGTCGCACAAGCATCTGAAGGACCACGAAGAGAGGCACACGATGAAGTTCCTGGCCAACCACCCTTTTAAGTGTACCTACTGCGAAGAAGGCTTCGAGCGACACGCGTCACTGGCAATACACCAGGCCCACATCCACCGACAGCCCCAGAAGAAACCTGGCACTGGCGTTGCCAAGAAGAAACACGAAGAAGAAGTGCGCGTCTTTCTGGACGACAAAACCACGCTTATCATCAAAGTCGCACTCGGTCCGAATGTCTACGGATCCGATAACTTCCGAACGTTGAGGGACGGAGGTTTGCAAACTCTGATATCGTCCTTTTTTACTGATTACGGCGCCCGGCACCCGTCATTTAATGTCATCCCTCAATTCGAATGCATGGTCTGCAAGCTTGTCTTCCCGGACGCCCACAACTTGACCCAGCACGTCAACCGGTACATGAAGGAGAGTCCCTTGTCCTACGGTTGCAAATTTTGCGACAAACGATTTCGTTGGATAGCGTATCTCGAGGACCACACGCGCAAGCACTTCAACATCAACACCAACAACGTTTTCACCTGCAACGTGTGTCGCGAGCGCTACCTTACCGAAATTTCTCTGTATGCGCATCAAGTGCATTTTCACCATCAACAGAACAACATTTTGCAACAATTGCTGGCGACGGAAGAACAAAAGATGCTGCATTCCGCACGGCGTCTTCCGGCAATTGAAGCCAACAAACGTATGCACAATCTTGAACAGACCTTCAATGACGACAACAATTGCGTCATCATAGAGCCGGAGAAACCAGCAGTGCCAACCCATTTCGTGACTACCGAACCAACGACGGAGAACTTCATGCTGTGCCCCGTCATCACCTGTCAAAAGGTCTTCTCGACGTTGAAGGAGTACAATGAGCACGAAGCAACTTGTCAGAGCTTCCAGTGCCAAACATGCAGCAAGGTCTTCAGCACCGAACTCGCGGTGAAGTTGCACAGCGAAAATATGCACGGAGTCCCCGTTTCGAGCAAGCAGCCACCCGCCCAGGAGAACGAGAACCAAGCCAATCCTCAACGGGTCGGTCTTCTGAAGGTCAAGTCTTTCGCCAAGTTCACGGACAACCAAGAGGAAGATCCTTTGAGCCTCCCCAAGATGTCTTCCCCGGTTCTGCAGATGCAGCAGATGGTTGCCAATGCTCATTGGACCCAAATACAACTGAATCCTGTAGAACAGACTACAAAACCGGCGACTAGCGTCGGATCCAACCAGAACTTCATCATGGTAAAACGCCCCGGCGAATCGGTCCTGAAACCGGTCCCCAGCGGAAAAAGGATCTTGCTGCCGCCGGAAACTTCCAAACGCTTTATCGCCACAAACCTGATGATGCCCAGCGAGTCTTTTCCGACCAAGGCAAAGGTCGTCTCCGAGTGCAAGATCTGCAAAGTCGCGATTCCAGAAGGCTTCCAGCTCGCGCAGCACTACGCGTCCAAGTGCTGGGTCAACCGCTGCTTCATCTGCGGACAGGTCATGGGATCCTTGGAAGCTTTGCTGTATCACGTGGGCTTACACCCTGATATCCTTTGCCAGGTTTGCGGTGCCGTGTTTCTGGACAAGCAGGACTTTATCCTCCACATTCCCGGTTGCGTCGACCTGGTCAAGTCGACGCAAGGCTGCAGCGACGTTGGGGCGACTCAGCCCAAGGTCGTCGAGGTCGATCTGGCGTCAACCGAGGACGTCAACTGTGGCGTCTGCGCCAAAGTCTTCCCCACCGTCGCGGAGGTCACGGCACATCTCAAGTCCGAACATCGGGATTTCAAGTGCAACATCTGCCAGTTGAAGTTCTTCgcgaagaaaattttgtgtatccATTTGGAGAAACATCACAATGTGCCCGAGCACGCCATCTACTTCTGTAGCCTTTGCAAGACAGGGTTCTCGGTCAAGGCAAATTATGATTGTCACTCGTGTTTCCTGTAA
- Protein Sequence
- NRQQLQRPIMGAILSAASIGAAFAEAFAAHAVVAAHAFLAHETYILHSAQMKCPSTTSNSGISVHTRNKRKYEETFLDTSQLNDDHSAAEGDVEDRSKKSKKKPAVARREKPKIVSRNKVFKCDTCGLQYESELKLTAHLIQYSNTGNFACSNCKLRFVHSRDCHHHMKFGHSRNVGNKHQVCPHCQQTFKYEEKFHAHMTHYHQSVQTSNKSIAQKKVSISPKTGSPQDPKYTARKGIQTKLTDYLIRASRVKPCPKSKKPGACNIQVGQVMSLSSSLPLGHIKEEIDGDSNKPFEPPKESEKILARRYGCRPCFVDVTRLDVVIKSELEWPLGHADENEFVNEELRGDIAGDYSEESIREEGYQDMGGEDQEDSTNASDRGESFCESTNDDTEQNVRKKQLEENIRRREYKVLLTRLEDTVLPPGIKIAERLADPVEPDFVCGICKRRFTDENKWVNHKKKYHFVYKSTICRARFNCQTKLINHYFEHIPPQNFQCCVCGEAIRNAKILYHHLKMHCVEIDQTVEGPMDMSITCTLNRRTNRCVCGVECGNEFEYRNHTGNCEAWTKAHYIAFDYKMPPVKELRENTYFVDPKESKNLLPSDESDDPSVDSESSDDSDSDIMSVASDDVGKEYPLRSKGLPVDHIADSVTREHADNTTRSGRTLKSVKHFTFPMDALGKSDQSGVAKVVNDQEEQPKTRINDSPPPSSTMNFKVISSQEGNFVYLPEDEGVEVSGETASPKTQSHPCLTCGTKFHNYENYYKHIQSYSKGFTSKCSYCGTRFPGKSLLRYHVQATHATENVKDYGFRCPSCNQGFFKKCTLKMHITHIHKIKWNESFAPSEKPAKIDITSGGCKCEVCSIEFDTSEDWASHQKFYNKQLKCNCSICKIQFNGEYVLKQHNKLFHLSQGAMMKYRYPCNTCGEGFENDNSLNSHMLHVHVARKKTPTPQPLDLTVEELDVPKNSSKTFDDRTCRTCNMIFETIDHMWAHEEEFTNDGDFQCNMCYKRCRKETLLETHQKLTHLNPDKNPKYKCSTCGEVMHNYLSLNSHNKHFHNRLPLGSRVTVVPERADHQYSRRPWKTMAHLEPPAPSTQKPVREASVRKEVREVPPLKPVQKLPVRKPVQEVPVRKPAQEVPVWKPVQEVQVEKDVKEVPVLQSLQAFDTERLASAYSAFQDRQQKSLKCSICSGVFNEETMKDHIAEYLNDGDQRCSRCSRRYSSHKHLKDHEERHTMKFLANHPFKCTYCEEGFERHASLAIHQAHIHRQPQKKPGTGVAKKKHEEEVRVFLDDKTTLIIKVALGPNVYGSDNFRTLRDGGLQTLISSFFTDYGARHPSFNVIPQFECMVCKLVFPDAHNLTQHVNRYMKESPLSYGCKFCDKRFRWIAYLEDHTRKHFNINTNNVFTCNVCRERYLTEISLYAHQVHFHHQQNNILQQLLATEEQKMLHSARRLPAIEANKRMHNLEQTFNDDNNCVIIEPEKPAVPTHFVTTEPTTENFMLCPVITCQKVFSTLKEYNEHEATCQSFQCQTCSKVFSTELAVKLHSENMHGVPVSSKQPPAQENENQANPQRVGLLKVKSFAKFTDNQEEDPLSLPKMSSPVLQMQQMVANAHWTQIQLNPVEQTTKPATSVGSNQNFIMVKRPGESVLKPVPSGKRILLPPETSKRFIATNLMMPSESFPTKAKVVSECKICKVAIPEGFQLAQHYASKCWVNRCFICGQVMGSLEALLYHVGLHPDILCQVCGAVFLDKQDFILHIPGCVDLVKSTQGCSDVGATQPKVVEVDLASTEDVNCGVCAKVFPTVAEVTAHLKSEHRDFKCNICQLKFFAKKILCIHLEKHHNVPEHAIYFCSLCKTGFSVKANYDCHSCFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -