Basic Information

Insect: Platygaster equestris
Gene Symbol: -
Assembly: GCA_030522785.1
Location: JAPYZK010000201.1:928-5175[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00044 0.066 14.7 0.1 2 23 582 603 581 603 0.96

2 7 5.8e-05 0.0086 17.5 0.2 1 23 651 674 651 674 0.98

3 7 0.14 21 6.8 2.4 2 23 713 734 712 734 0.95

4 7 0.00023 0.035 15.6 0.8 1 23 749 771 749 771 0.97

5 7 0.0072 1.1 10.9 0.0 1 20 809 828 809 831 0.92

6 7 0.00044 0.065 14.7 0.5 3 23 846 866 846 866 0.97

7 7 0.26 38 6.0 0.1 3 23 873 893 872 893 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00044	0.066	14.7	0.1	2	23	582	603	581	603	0.96
2	7	5.8e-05	0.0086	17.5	0.2	1	23	651	674	651	674	0.98
3	7	0.14	21	6.8	2.4	2	23	713	734	712	734	0.95
4	7	0.00023	0.035	15.6	0.8	1	23	749	771	749	771	0.97
5	7	0.0072	1.1	10.9	0.0	1	20	809	828	809	831	0.92
6	7	0.00044	0.065	14.7	0.5	3	23	846	866	846	866	0.97
7	7	0.26	38	6.0	0.1	3	23	873	893	872	893	0.95

Sequence Information

Coding Sequence: atgtcgaaaaagcGAAAATTGGTGAACTTGGAAGAGCGGTGCAGACTGTGCCTCACCGACGAAGGCTCGATGAGCGCTTTGTTTGTCGAATCGCTCAAAAGTGAGATTCAAGATTTAACGATTTCTACCTCCGTCGACGTCAAGAAACAAAGCCACTTGCCAAAAAACGTATGTCACGTTTGTCTCTACAAGTTGAATATGTGGGCCGAGTTCAAAGAACGATTTGTGCGCTCGAACAAGGTATTGCTGTCACATTTCGAAGTCGAGGAAGATTTGGAGCATTGTTCGGATTTGACGCTGAAAACTACTACCAAAGATGACAATGGCCCTGAGCAACATGAGAAAATGGATGATAACGAATGCTCATCGGTCTGCGATTCTTGGCAGATGAATGTAGAAGAGGAAGATGAGGAAGAGGAGGAGGAGGGAGAGGAGGAGGAAGAAGAGGATGATGAGTTGATGAAGATGAGTCAAGAGAATGGCCGAGATGGGGTTGAAAGAGAAGTAGCGTCATTTTTGAGGCGGGGTAGCAGCAAGCCGTCATTGGAGAAGCGGCGAAGAATGATGACTAAGCGTTGgggagagagacagagagcCTTGGTAGCTGCGACTCGTGACCTTGTCTCAGAAAGTGACTCAGTCGCTTCGGACAATGTGGAGTTGTCGCCGTTGCAAAAAGCTAGGGCAAAAACGAATGCCGAAAAAGAGATAGAACGGAAGAAAAGGGTCGACAGGGCACTCAAGCAGTTGGAAATCGACGCAAATTTCCCTGTCGATTTGGATGGTCTACGCCCAAGTGATTCGGCGCGAAAATCGCTGCTTAaagcaaattcaaaaagccCAGTGCAGAACCACTCATCAGAGCCCAAGGAGAATTACGTGCCTCGATCTGTCAAGTCAGAGTTTGAGATTGGCGATGCAACCTACATTGTAACATCAACCTTGTTCTTCACCGAGTCGCAAGCTGCCAGTGGTGGTGCCGTTGCTGGCGAATGCAGCACTCTTGATGCCAAAGACACGCCGAACAAGGAGGAAGAAACAGCTGGAGAGGAGAAACGAGAGAAAAATAGCGGCGATATATTTGCAGCAGTCCAGCTGCGCAGAGTGAATCCCAAATCGCCACCCATGCAAggaaaaaactttcttgaGAGATGTCTCAACATTGAGGTGGAGGGTCGAGAGTTGGAGGCTTTGGAGCATTTGCAGTTGGAGCTCGCGACTTTCGTAGAGAAGGAAATGAAGGATAAGTTGAGCAATTTTTCGAGCACTCCCAAAAGCAAGGAATTGAATAGCCAGCAGCAGTCGCTGGAGCAGCAGCTCAAAACGATAGTGGAGAAGGCGATACGCGCCAATTATGAAACATCGCAGAGTGTAGCTAAAGAAGGGGAGCAAGCTCTGTCAGTGGCTTTTGTCGAGGCCGCCCAGCGTTCCGCGGTATTTCAGCCGAAGGTGCTTGTCGACCGGTTGACCTCCGATGCGGTAGGCAAGGTTCATGGCTCGCGAAGCAAGCGCCGCGTTACGCAGCAACCTGCGAGGTATAGGGACTTTGACATCTCTGGCCTAGGCTCAGACGACGATCAACAGCAGACCCAGGAGCCATCATGTGTCAGGTCAAACGCCACCGCCACTGGCAAGGTGGCACATGAAGCAAAGCCATCCCGACGACACAACAGTCCAATGGGCAACAAAATAGCTCAACCACCAGGAGCGATCCCAAAACAACAGCCGAAGCCGGAAATGCAAATGTGCGGTGTTTGCGGAAAAACTTTCATTAGCCTGGAGGAAATCAAGGAGCATGTGAAAGTACACAGTTATCCGCTACAGCAACAGTCTGCTGCTAGTAATGAGGCTGGCCAGGCCGAGAAAACCAAGCTCATGCGCTGCAAAAGGTGTCACGCGATCGTCGAGGCAAGACTCGTTAAAATGCACATTTGCCATAACAGACAGGTGTACAAATGCAATGTTTGCCAAGCGCCCTTCAGGACCGAAAAACAACTCGTCTCTCACCTCGAGACGGTACATATAACACCAAAAAAGACCGAGTTGGAATCTGGCGAGTTGGAAGGAGACATAGAAAATAACATGGACACGATCGTCATATCCAGCCCCAGCCCAGTAAAATCCGAATCCAAGAAAGTTTGCTGCTTCTGTGACAAAACCTTCATGGATGACGATGTCTTCAAGGACCACTTACAGCAGCACTGCGACGAAGCTAGCAATGAGGACGAATCCAAGGACGACAAGTATTGCTGCGGCATTTGTGGCAAAAGCCTGGAAAGCAATGAGGTTCTGCAAAAGCACGTCCAGAGGCACTTGTTTGACGATGGAGACGACAATCCCAATCTTATCAATGTATTGAGCCAAGACAAGACAGAGGAGGAGGACAAGGAGAAGGACCAAGAGGAAAAAGAAGAGACAGCTGTATTCCAGTGCCCGGAATGCCCGGAAGTGTTTGCCTCGGTAGCACTAATGGAATTACACCAACCCCTTCATGCGGAACAAGAAAGAATCGCCAAGTGGATGAACCCTATTGGCTGTAGCTTATGTGATGCCGTTTTTACAACAGAAAAGCAGTTGAACTCGCACATGTTTGAGCACAGCAAAACCGCCAATGTTTGTATGCTTTGCGATAGTCTCTTTGAGACTTTGCAGGAACTTCAACAGCACGTCAAGGCGCACTGA
Protein Sequence: MSKKRKLVNLEERCRLCLTDEGSMSALFVESLKSEIQDLTISTSVDVKKQSHLPKNVCHVCLYKLNMWAEFKERFVRSNKVLLSHFEVEEDLEHCSDLTLKTTTKDDNGPEQHEKMDDNECSSVCDSWQMNVEEEDEEEEEEGEEEEEEDDELMKMSQENGRDGVEREVASFLRRGSSKPSLEKRRRMMTKRWGERQRALVAATRDLVSESDSVASDNVELSPLQKARAKTNAEKEIERKKRVDRALKQLEIDANFPVDLDGLRPSDSARKSLLKANSKSPVQNHSSEPKENYVPRSVKSEFEIGDATYIVTSTLFFTESQAASGGAVAGECSTLDAKDTPNKEEETAGEEKREKNSGDIFAAVQLRRVNPKSPPMQGKNFLERCLNIEVEGRELEALEHLQLELATFVEKEMKDKLSNFSSTPKSKELNSQQQSLEQQLKTIVEKAIRANYETSQSVAKEGEQALSVAFVEAAQRSAVFQPKVLVDRLTSDAVGKVHGSRSKRRVTQQPARYRDFDISGLGSDDDQQQTQEPSCVRSNATATGKVAHEAKPSRRHNSPMGNKIAQPPGAIPKQQPKPEMQMCGVCGKTFISLEEIKEHVKVHSYPLQQQSAASNEAGQAEKTKLMRCKRCHAIVEARLVKMHICHNRQVYKCNVCQAPFRTEKQLVSHLETVHITPKKTELESGELEGDIENNMDTIVISSPSPVKSESKKVCCFCDKTFMDDDVFKDHLQQHCDEASNEDESKDDKYCCGICGKSLESNEVLQKHVQRHLFDDGDDNPNLINVLSQDKTEEEDKEKDQEEKEETAVFQCPECPEVFASVALMELHQPLHAEQERIAKWMNPIGCSLCDAVFTTEKQLNSHMFEHSKTANVCMLCDSLFETLQELQQHVKAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -