Basic Information

Insect: Platygaster equestris
Gene Symbol: -
Assembly: GCA_030522785.1
Location: JAPYZK010002447.1:3806-6671[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.1e-06 0.0011 20.4 2.1 1 23 13 35 13 35 0.96

2 17 0.0024 0.35 12.4 6.8 2 23 42 63 41 63 0.96

3 17 2.4e-05 0.0035 18.7 1.8 1 23 73 95 73 95 0.97

4 17 8.3 1.2e+03 1.3 0.6 2 9 127 134 127 134 0.88

5 17 0.033 4.9 8.8 1.3 5 23 157 175 156 175 0.93

6 17 3.5 5.2e+02 2.5 7.9 1 23 180 202 180 202 0.98

7 17 0.0019 0.28 12.7 0.1 2 19 208 225 207 226 0.94

8 17 0.0016 0.24 13.0 0.5 3 23 239 259 238 259 0.91

9 17 1.1e-05 0.0016 19.8 0.7 1 23 263 285 263 285 0.98

10 17 4.4e-06 0.00066 21.0 0.3 2 23 292 313 291 313 0.96

11 17 0.00069 0.1 14.1 1.6 1 23 320 342 320 342 0.98

12 17 0.00019 0.028 15.9 0.2 1 23 346 368 346 368 0.95

13 17 0.012 1.8 10.2 0.2 3 23 376 396 374 396 0.96

14 17 0.004 0.59 11.7 0.0 1 23 414 436 414 436 0.94

15 17 0.0011 0.16 13.5 0.5 1 23 442 464 442 464 0.96

16 17 0.22 33 6.2 3.6 1 20 473 492 473 494 0.92

17 17 0.004 0.6 11.7 4.7 3 23 501 522 500 522 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.1e-06	0.0011	20.4	2.1	1	23	13	35	13	35	0.96
2	17	0.0024	0.35	12.4	6.8	2	23	42	63	41	63	0.96
3	17	2.4e-05	0.0035	18.7	1.8	1	23	73	95	73	95	0.97
4	17	8.3	1.2e+03	1.3	0.6	2	9	127	134	127	134	0.88
5	17	0.033	4.9	8.8	1.3	5	23	157	175	156	175	0.93
6	17	3.5	5.2e+02	2.5	7.9	1	23	180	202	180	202	0.98
7	17	0.0019	0.28	12.7	0.1	2	19	208	225	207	226	0.94
8	17	0.0016	0.24	13.0	0.5	3	23	239	259	238	259	0.91
9	17	1.1e-05	0.0016	19.8	0.7	1	23	263	285	263	285	0.98
10	17	4.4e-06	0.00066	21.0	0.3	2	23	292	313	291	313	0.96
11	17	0.00069	0.1	14.1	1.6	1	23	320	342	320	342	0.98
12	17	0.00019	0.028	15.9	0.2	1	23	346	368	346	368	0.95
13	17	0.012	1.8	10.2	0.2	3	23	376	396	374	396	0.96
14	17	0.004	0.59	11.7	0.0	1	23	414	436	414	436	0.94
15	17	0.0011	0.16	13.5	0.5	1	23	442	464	442	464	0.96
16	17	0.22	33	6.2	3.6	1	20	473	492	473	494	0.92
17	17	0.004	0.6	11.7	4.7	3	23	501	522	500	522	0.94

Sequence Information

Coding Sequence: ATGGCTCTTGAAAAGACTGAAAAATCCAACCAAACACACGCCTGTCCCCACTGCCCAAGAATGTTCAGCCTCGCCACATCACTTCGACGTCACCTGCTGACACACACAAAACACAAACCCCAAAAATGCCAACACTGTGACCGATGTTTCCGACTGAACTCAAATCGCAAAAGGCACGAACTCATTCACATTGAATCTTccgcagaaaaaaaaacccacgaGTGCaatatttgtaataaaaaGTACGCGAAAGTCGAGAGCTTGCGCAATCATATACGAAACCACCGGAACATTAGCAGATTCGGACGACGCTGCCCATCGTCGGTAGAAAAACGAAGTCCGACGCAAGTCTTGAAACCGtacaaaactcaaattccAGTGTGCGACGTTTGTGGCAAAACGAACGATATCGAGTCCGATTCGGACAAACTTTCCCGAGCCCACCCCGAAATAGAGAACAATCGCAAAATCTGTGGGAAATTCGTTCGTTCGCAAAAGTGCCTCAAGACGCATACACTTGACCACATTAGAGGGTTGTACCAATGCTCCAAGTGTTGCCTGTGCTCAACGTCCCAGATAACCTTCCGCAGACACGAAAAGTCCCACGATAAGACGAAACTTACGTGCATGGATTGCGGAAGAACTTACACCGCGAAGAGCTCGCTCGAAATGCACAAGCCCTATTGCAAAGGAAACCTTGTCCCTGAGCTGTTGTGCCCAACCTGTGGTGAAGCTTTCTCGAATGAAATGGAACTGGAAAACCACTGCCTGAGTCACGGCAAGAAGTACGAGTGCGGGAGCTGTGACAGGAGGTTCTCTACGAAATGGGGGTTCCAGAAGCACATCAATTGGCACAACAAGAGCAAGTACGTGACCTGCCCGGAGTGCGGGAAGGTTTTCAAGACGAGAAGGGACTTCGTGGAGCATTACACGGTGCACACGGGGGGAACGGGGCCCTACAGTTGTCACCGGTGCAAGCAGCAGTTCAAGGTTCTGGAGGATCTGGAGGTTCACAGGCTGGTTCACGTGGAGCGGTTTTTCTGCGGGGAGTGTCCGAAGGGGTTCGACAGTTTCGAGGATCTGCAGAAGCACGCGGCGAGCCATTCGAGGGTGAAGCGGTTCGGGTGCGATGACTGCGGGAGGCTGTTTTTGTCGAAGAGCGGGCTGAGGGAGCATGTTTTGCAGCATTTGACAGGTCTACTTGGTGGAATCGAAAATGAAGAAGAtgacgataaaaaatttttctgcggCGAATGCCCCGAAGGTTTCGCAACCATGGACGCCTTAGTCAAACACGCGGCGAATCATACGTcgatgaaagttttcgaatgcgCGGACTGCGGCAGTCTTTTTTTCTCCAAGCGGAACCTGAAGAGCCATGTTTTGGAGCATTTGGAACCACAAAAAATCCGTCTACACAACTGTCGTCTCTGCAAGTCTCATTTTGCCAGCAAGGAACAACTGAAAGAAcacaagaatttttatttgagaCGCGTTTTTTGCGGTCAATGTCCCGAAAGGTTTAAAACTTTAACTGACTTGAAAAAACACATTACTCATTGTCATCTGTCGTCGAAGGTGAATTTTCGACCTAGTTTGCCAGCGAGGAACAACTAA
Protein Sequence: MALEKTEKSNQTHACPHCPRMFSLATSLRRHLLTHTKHKPQKCQHCDRCFRLNSNRKRHELIHIESSAEKKTHECNICNKKYAKVESLRNHIRNHRNISRFGRRCPSSVEKRSPTQVLKPYKTQIPVCDVCGKTNDIESDSDKLSRAHPEIENNRKICGKFVRSQKCLKTHTLDHIRGLYQCSKCCLCSTSQITFRRHEKSHDKTKLTCMDCGRTYTAKSSLEMHKPYCKGNLVPELLCPTCGEAFSNEMELENHCLSHGKKYECGSCDRRFSTKWGFQKHINWHNKSKYVTCPECGKVFKTRRDFVEHYTVHTGGTGPYSCHRCKQQFKVLEDLEVHRLVHVERFFCGECPKGFDSFEDLQKHAASHSRVKRFGCDDCGRLFLSKSGLREHVLQHLTGLLGGIENEEDDDKKFFCGECPEGFATMDALVKHAANHTSMKVFECADCGSLFFSKRNLKSHVLEHLEPQKIRLHNCRLCKSHFASKEQLKEHKNFYLRRVFCGQCPERFKTLTDLKKHITHCHLSSKVNFRPSLPARNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -